Click here to switch to the map view.

The map label for this gene is 169627211

Identifier: 169627211

GI number: 169627211

Start: 107679

End: 108866

Strand: Reverse

Name: 169627211

Synonym: MAB_0106c

Alternate gene names: NA

Gene position: 108866-107679 (Counterclockwise)

Preceding gene: 169627212

Following gene: 169627210

Centisome position: 2.15

GC content: 67.42

Gene sequence:

>1188_bases
ATGTCCGTGCGGCGGCTGGCGGAGGCACTGCGGGGAGCACCGGCGCCGCTGGCCGCGGTCGACATAGACGCGGCGCGGAG
CAACGCCGCGACGCTGGTCGACGCCGCATCCGGGCTGCCCATTAGGGTAGCCAGCAAGTCCATACGCAGCACCGCACTGA
TTCGAAAATTTCTGGAAATACCGGGTTTTCACGGAGTTCTTGCGTTTACTCCGGCGGAGGCCGTGCATTTGGGCGATGCC
GGCGTCGACGACGTGTTGATCGCCTACCCCAGCGTCGATCGCGGGGCTCTGGCGACGGCAGCCCGGCATCGCTCTGTCAT
CCGGCCTCTGATCGACTCGGCCGACCACGTGCGCCTGTTGGCCGAGATATCGCGTGAGACGAACGCACCCATCCCGGTGT
GTCTGGACATCGATGCCGGTTGGCGACCGCTGGGTGGTCCAGTACATCTGGGACCCAAGCGATCGCCGGTACGCACTCCT
GAGCAGGCGGCAGCACTGACCGATCTGGTGTGTGCGACGCCGGGGCTACGGCTTGCAGCTGTGATGGCTTACGACGGGCA
GATAGCCGGGGTCGGCGATATTGTGCCGGGAAATCCGTGGTACCAGTTGGCGGTTCGGGGGATGCAGGCCTCATCCCTGC
GCGAGCTTGGTGAGCGCCTCCCCCGGGTTCTGGATGCGGTGACCGCACGACTGCGCGCGGCGGGGGCACCGCCGCTGGAG
TTGGTGAACTCCGGTGGCACCGGCAGCCTTGCCCGCATCGCAGGGCTCGGCTTCGCCACCGAACTGGCCGCCGGGTCCGG
CTTCTTCGCACCCGCCCTGTTCGATCATTACCGCAGCCTGCACCTGGAGCCGGCCGCCGCCTTCGCGCTGCCGGTGGTAC
GTAAACCTGCACCAGGGCTCGCGACCGTGCTCGGCGGCGGATACATCGCCAGTGGCCCGGCCGGTGCCAGCCGGGTGCCG
GTGCCGTCGTGGCCGCCCGGTTTGTCCTTCGAGGCTTCGGAAGGGGCCGGGGAGGTACAAACGCCGTTACGGGGAGCACG
CGCGCTGCGGATCGGCGATGCGGTGTGGTTCCGGCACGCCAAGGCCGGTGAACTCTGCGAGCATTTCACCGAGTTACAGC
TCGTCGAAGGGGGACAGCACGCCGGATCGGTGTCGACGTATCGCGGCGAGGGAATGATGTTTCTGTGA

Upstream 100 bases:

>100_bases
CGGGGGAGCGTGATGTCGTCGTCAGCTTCGGCGGTATCGACTTCACGCCGGGCGCGATCTGCTATGCCGACCATGACGGC
GTTGTCGTGGTTCCTGCCTG

Downstream 100 bases:

>100_bases
GCGAATGGCGCAACTGGAGCGGTCAAACATCTTGTGCCCCAGCTATGCTGGTGCGTCCCCGGTCTGAAGATGAACTGGCG
TTCGCGCTGAGACGTTCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Alanine Racemase Domain-Containing Protein; Amino Acid Aldolase Or Racemase; Amino Acid Aldolase Or Racemase-Like; Amino Acid Aldolase Or Racemase-Like Protein; Alanine Racemase

Number of amino acids: Translated: 395; Mature: 394

Protein sequence:

>395_residues
MSVRRLAEALRGAPAPLAAVDIDAARSNAATLVDAASGLPIRVASKSIRSTALIRKFLEIPGFHGVLAFTPAEAVHLGDA
GVDDVLIAYPSVDRGALATAARHRSVIRPLIDSADHVRLLAEISRETNAPIPVCLDIDAGWRPLGGPVHLGPKRSPVRTP
EQAAALTDLVCATPGLRLAAVMAYDGQIAGVGDIVPGNPWYQLAVRGMQASSLRELGERLPRVLDAVTARLRAAGAPPLE
LVNSGGTGSLARIAGLGFATELAAGSGFFAPALFDHYRSLHLEPAAAFALPVVRKPAPGLATVLGGGYIASGPAGASRVP
VPSWPPGLSFEASEGAGEVQTPLRGARALRIGDAVWFRHAKAGELCEHFTELQLVEGGQHAGSVSTYRGEGMMFL

Sequences:

>Translated_395_residues
MSVRRLAEALRGAPAPLAAVDIDAARSNAATLVDAASGLPIRVASKSIRSTALIRKFLEIPGFHGVLAFTPAEAVHLGDA
GVDDVLIAYPSVDRGALATAARHRSVIRPLIDSADHVRLLAEISRETNAPIPVCLDIDAGWRPLGGPVHLGPKRSPVRTP
EQAAALTDLVCATPGLRLAAVMAYDGQIAGVGDIVPGNPWYQLAVRGMQASSLRELGERLPRVLDAVTARLRAAGAPPLE
LVNSGGTGSLARIAGLGFATELAAGSGFFAPALFDHYRSLHLEPAAAFALPVVRKPAPGLATVLGGGYIASGPAGASRVP
VPSWPPGLSFEASEGAGEVQTPLRGARALRIGDAVWFRHAKAGELCEHFTELQLVEGGQHAGSVSTYRGEGMMFL
>Mature_394_residues
SVRRLAEALRGAPAPLAAVDIDAARSNAATLVDAASGLPIRVASKSIRSTALIRKFLEIPGFHGVLAFTPAEAVHLGDAG
VDDVLIAYPSVDRGALATAARHRSVIRPLIDSADHVRLLAEISRETNAPIPVCLDIDAGWRPLGGPVHLGPKRSPVRTPE
QAAALTDLVCATPGLRLAAVMAYDGQIAGVGDIVPGNPWYQLAVRGMQASSLRELGERLPRVLDAVTARLRAAGAPPLEL
VNSGGTGSLARIAGLGFATELAAGSGFFAPALFDHYRSLHLEPAAAFALPVVRKPAPGLATVLGGGYIASGPAGASRVPV
PSWPPGLSFEASEGAGEVQTPLRGARALRIGDAVWFRHAKAGELCEHFTELQLVEGGQHAGSVSTYRGEGMMFL

Specific function: Unknown

COG id: COG3616

COG function: function code E; Predicted amino acid aldolase or racemase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40984; Mature: 40853

Theoretical pI: Translated: 8.13; Mature: 8.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVRRLAEALRGAPAPLAAVDIDAARSNAATLVDAASGLPIRVASKSIRSTALIRKFLEI
CCHHHHHHHHCCCCCCEEEEECHHHCCCCCEEEECCCCCEEEEHHHHHHHHHHHHHHHHC
PGFHGVLAFTPAEAVHLGDAGVDDVLIAYPSVDRGALATAARHRSVIRPLIDSADHVRLL
CCCCCEEEECCCCEEECCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHH
AEISRETNAPIPVCLDIDAGWRPLGGPVHLGPKRSPVRTPEQAAALTDLVCATPGLRLAA
HHHHHHCCCCCEEEEECCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHCCCCCCEEE
VMAYDGQIAGVGDIVPGNPWYQLAVRGMQASSLRELGERLPRVLDAVTARLRAAGAPPLE
EEEECCEECCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
LVNSGGTGSLARIAGLGFATELAAGSGFFAPALFDHYRSLHLEPAAAFALPVVRKPAPGL
HCCCCCCCCHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCH
ATVLGGGYIASGPAGASRVPVPSWPPGLSFEASEGAGEVQTPLRGARALRIGDAVWFRHA
HHHHCCCEEECCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHCCCEEEECHHHHHHCC
KAGELCEHFTELQLVEGGQHAGSVSTYRGEGMMFL
CHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCEEC
>Mature Secondary Structure 
SVRRLAEALRGAPAPLAAVDIDAARSNAATLVDAASGLPIRVASKSIRSTALIRKFLEI
CHHHHHHHHCCCCCCEEEEECHHHCCCCCEEEECCCCCEEEEHHHHHHHHHHHHHHHHC
PGFHGVLAFTPAEAVHLGDAGVDDVLIAYPSVDRGALATAARHRSVIRPLIDSADHVRLL
CCCCCEEEECCCCEEECCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHH
AEISRETNAPIPVCLDIDAGWRPLGGPVHLGPKRSPVRTPEQAAALTDLVCATPGLRLAA
HHHHHHCCCCCEEEEECCCCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHCCCCCCEEE
VMAYDGQIAGVGDIVPGNPWYQLAVRGMQASSLRELGERLPRVLDAVTARLRAAGAPPLE
EEEECCEECCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
LVNSGGTGSLARIAGLGFATELAAGSGFFAPALFDHYRSLHLEPAAAFALPVVRKPAPGL
HCCCCCCCCHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCH
ATVLGGGYIASGPAGASRVPVPSWPPGLSFEASEGAGEVQTPLRGARALRIGDAVWFRHA
HHHHCCCEEECCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHCCCEEEECHHHHHHCC
KAGELCEHFTELQLVEGGQHAGSVSTYRGEGMMFL
CHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA