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The map label for this gene is pobB [H]

Identifier: 169627193

GI number: 169627193

Start: 84707

End: 85846

Strand: Reverse

Name: pobB [H]

Synonym: MAB_0088c

Alternate gene names: 169627193

Gene position: 85846-84707 (Counterclockwise)

Preceding gene: 169627194

Following gene: 169627192

Centisome position: 1.69

GC content: 67.19

Gene sequence:

>1140_bases
ATGTTCGATCGTTTCCGCCACACGGGCCAGCCCACCTCCAAGCGCAAGCGGCCGTCGCTGCCGCCCACGCTGTACGGCAC
GCTGCCGGTTTCACCCACCATCGCGCTGGGCACCGCGCTGTTCCCGGTCGCGGTCCGGGCCATCGGTGCGCTGCTGATTC
TCAAGAAGCCGCCGGAGAACCACGTCGACCGCACGCTGAAGCTGGTGGTCAAGGACCGCTGGATCGAAGCCAAGGATCAG
GACGTGGCGAGCCTCGTGCTGGCCTCGCCCGACGGGGACCGGCTGCCACCGTGGCATCCCGGCGCGCACCTGGACCTGCT
GCTGCCCTCCGGCCGGATGCGGCAATACTCGCTGTGCGGCGACGTTTCCGATCCGTACCACTACCGCATCGCCGTACGCC
GCATTCCCGGTGGCGGGGGCGGATCCATCGAGGTGCATGACGCGCTGCAGATCGGTGCCACGGTGTCCATCCTCGGACCG
CGCAACGCCTTCCCGCTGGCCATGACCCAGCCGGGGCCGCGCAAGCTGCACTTCGTGGCCGGTGGCATCGGTATCACGCC
GATCCTGTCCATGATCGCGTTCGCTGAGCAGCTGGGCAAGCCATGGACCATGGTGTACACCGGACGGCACCGCGACTCGC
TGCCATTCCTCAACGAGCTCAAGCGCTTTGGCGACCGCGTGATCATCCGGACGGACGATCAATCCGGACTTCCGACCGCC
GACGACTTACTGCCCGGCGTGGGGGAGAACGACGCGGTGTACTGCTGTGGCCCGGCTCCGATGCTCGCGGTGTTACAGCG
GCGCCTCCTCGAAATGCCCTCGGTAGAGCTGCATTTCGAGCGCTTCGCCGCCGCGCCCGTGGTGGATGGCCATCCCTTCG
AGGTGCAGTTGGGGCCTGGCGGACCGGTGCTGGATGTACCCGCCGACCGCACGGCGCTGGATGTGATCAAGAAGCGGCTG
CCGCATGTTGCCTACTCGTGCCAGCAGGGTTTCTGCGGCACCTGCAAGGTCAACGTGCTGGCCGGCACCGTCGATCATCG
CGATCAGATCCTCACCGAGTCCCAGCGCGACGAGGGTCAGATCCTCACCTGCGTTTCGCGCGGCGAAGGACGCCTGGTTC
TGGACCTGCCCGCCGAATAG

Upstream 100 bases:

>100_bases
TCATGCGTCCGGGCTTCTCACCCGACCAGGTGGGCAGCACCGCACAGGCAGTCGCGTACCTGAGTACGTCGCCCGCCGCC
AAGGCAGCGGCTGGCTACTG

Downstream 100 bases:

>100_bases
CCCACTGCGGAGGGTTTACCCGGCGTTCATCGGTTCCCGGCAAACTGGCCCGATGCGCATCGCTCACGCAGCTACCGCCG
TCACATCCGCACTCACCCTC

Product: putative oxidoreductase

Products: NA

Alternate protein names: 4-carboxydiphenyl ether; phenoxybenzoate dioxygenase subunit beta [H]

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MFDRFRHTGQPTSKRKRPSLPPTLYGTLPVSPTIALGTALFPVAVRAIGALLILKKPPENHVDRTLKLVVKDRWIEAKDQ
DVASLVLASPDGDRLPPWHPGAHLDLLLPSGRMRQYSLCGDVSDPYHYRIAVRRIPGGGGGSIEVHDALQIGATVSILGP
RNAFPLAMTQPGPRKLHFVAGGIGITPILSMIAFAEQLGKPWTMVYTGRHRDSLPFLNELKRFGDRVIIRTDDQSGLPTA
DDLLPGVGENDAVYCCGPAPMLAVLQRRLLEMPSVELHFERFAAAPVVDGHPFEVQLGPGGPVLDVPADRTALDVIKKRL
PHVAYSCQQGFCGTCKVNVLAGTVDHRDQILTESQRDEGQILTCVSRGEGRLVLDLPAE

Sequences:

>Translated_379_residues
MFDRFRHTGQPTSKRKRPSLPPTLYGTLPVSPTIALGTALFPVAVRAIGALLILKKPPENHVDRTLKLVVKDRWIEAKDQ
DVASLVLASPDGDRLPPWHPGAHLDLLLPSGRMRQYSLCGDVSDPYHYRIAVRRIPGGGGGSIEVHDALQIGATVSILGP
RNAFPLAMTQPGPRKLHFVAGGIGITPILSMIAFAEQLGKPWTMVYTGRHRDSLPFLNELKRFGDRVIIRTDDQSGLPTA
DDLLPGVGENDAVYCCGPAPMLAVLQRRLLEMPSVELHFERFAAAPVVDGHPFEVQLGPGGPVLDVPADRTALDVIKKRL
PHVAYSCQQGFCGTCKVNVLAGTVDHRDQILTESQRDEGQILTCVSRGEGRLVLDLPAE
>Mature_379_residues
MFDRFRHTGQPTSKRKRPSLPPTLYGTLPVSPTIALGTALFPVAVRAIGALLILKKPPENHVDRTLKLVVKDRWIEAKDQ
DVASLVLASPDGDRLPPWHPGAHLDLLLPSGRMRQYSLCGDVSDPYHYRIAVRRIPGGGGGSIEVHDALQIGATVSILGP
RNAFPLAMTQPGPRKLHFVAGGIGITPILSMIAFAEQLGKPWTMVYTGRHRDSLPFLNELKRFGDRVIIRTDDQSGLPTA
DDLLPGVGENDAVYCCGPAPMLAVLQRRLLEMPSVELHFERFAAAPVVDGHPFEVQLGPGGPVLDVPADRTALDVIKKRL
PHVAYSCQQGFCGTCKVNVLAGTVDHRDQILTESQRDEGQILTCVSRGEGRLVLDLPAE

Specific function: Degrades exclusively diarylether compounds having carboxyl groups in the 3- or 4-position. Yields a hemiacetal that spontaneously hydrolyzes to phenol and protocatechuate [H]

COG id: COG1018

COG function: function code C; Flavodoxin reductases (ferredoxin-NADPH reductases) family 1

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

Organism=Escherichia coli, GI1788104, Length=317, Percent_Identity=32.807570977918, Blast_Score=149, Evalue=2e-37,
Organism=Escherichia coli, GI1787098, Length=274, Percent_Identity=23.7226277372263, Blast_Score=65, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR017927
- InterPro:   IPR001041
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR000951
- InterPro:   IPR017938 [H]

Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 41249; Mature: 41249

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDRFRHTGQPTSKRKRPSLPPTLYGTLPVSPTIALGTALFPVAVRAIGALLILKKPPEN
CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCEEEEEECCCHH
HVDRTLKLVVKDRWIEAKDQDVASLVLASPDGDRLPPWHPGAHLDLLLPSGRMRQYSLCG
HHHHHHHEEEHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEECC
DVSDPYHYRIAVRRIPGGGGGSIEVHDALQIGATVSILGPRNAFPLAMTQPGPRKLHFVA
CCCCCEEEEEEEEECCCCCCCCEEEEHHEEECCEEEEECCCCCCCEEECCCCCCEEEEEE
GGIGITPILSMIAFAEQLGKPWTMVYTGRHRDSLPFLNELKRFGDRVIIRTDDQSGLPTA
CCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHCCEEEEEECCCCCCCCH
DDLLPGVGENDAVYCCGPAPMLAVLQRRLLEMPSVELHFERFAAAPVVDGHPFEVQLGPG
HHHCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCEEEHHHHHCCCCCCCCCEEEEECCC
GPVLDVPADRTALDVIKKRLPHVAYSCQQGFCGTCKVNVLAGTVDHRDQILTESQRDEGQ
CCEEECCCCHHHHHHHHHHCCHHHHHHCCCCCCEEEEEEEEECCCHHHHHHCCCCCCCCC
ILTCVSRGEGRLVLDLPAE
EEEEEECCCCEEEEECCCC
>Mature Secondary Structure
MFDRFRHTGQPTSKRKRPSLPPTLYGTLPVSPTIALGTALFPVAVRAIGALLILKKPPEN
CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCEEEEEECCCHH
HVDRTLKLVVKDRWIEAKDQDVASLVLASPDGDRLPPWHPGAHLDLLLPSGRMRQYSLCG
HHHHHHHEEEHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCEEEEECC
DVSDPYHYRIAVRRIPGGGGGSIEVHDALQIGATVSILGPRNAFPLAMTQPGPRKLHFVA
CCCCCEEEEEEEEECCCCCCCCEEEEHHEEECCEEEEECCCCCCCEEECCCCCCEEEEEE
GGIGITPILSMIAFAEQLGKPWTMVYTGRHRDSLPFLNELKRFGDRVIIRTDDQSGLPTA
CCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHCCEEEEEECCCCCCCCH
DDLLPGVGENDAVYCCGPAPMLAVLQRRLLEMPSVELHFERFAAAPVVDGHPFEVQLGPG
HHHCCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCEEEHHHHHCCCCCCCCCEEEEECCC
GPVLDVPADRTALDVIKKRLPHVAYSCQQGFCGTCKVNVLAGTVDHRDQILTESQRDEGQ
CCEEECCCCHHHHHHHHHHCCHHHHHHCCCCCCEEEEEEEEECCCHHHHHHCCCCCCCCC
ILTCVSRGEGRLVLDLPAE
EEEEEECCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: FMN. [C]

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7710319 [H]