| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is phoA [H]
Identifier: 169627192
GI number: 169627192
Start: 83095
End: 84654
Strand: Reverse
Name: phoA [H]
Synonym: MAB_0087c
Alternate gene names: 169627192
Gene position: 84654-83095 (Counterclockwise)
Preceding gene: 169627193
Following gene: 169627190
Centisome position: 1.67
GC content: 65.83
Gene sequence:
>1560_bases ATGCGCATCGCTCACGCAGCTACCGCCGTCACATCCGCACTCACCCTCGCGCTCGCTCCGGTGGCTGCCGCCGCGCCACC ATCGGATGCGCCCGAGGTCCCCGTGGGCGACATCGCCAAGACAGGCGGCGCCAACCGCACCACGGGCGGGCGCGACGGCG ACAAGACAGCCGATCTGCGCGATTCGGTGCGGGGGCGCAACGCCAAGAACGTCATCCTGCTGATCGGCGACGGCATGGGC ACATCGGAGATCACCTCGGCGCGCAACTATCAGTACGGCGCCGCCGGGACACTACCGGGGCTGGACGCATTGCCGATCAC CGGCGAGTACACCACGTTCGCACTGACCAAGGACGGGCCGGACAAGGGCAAGCCGGACTATGTCACCGACTCGGCGGCCT CCGGCACCGGATGGGCCACCGGCACCAAGACCTATAACGGCGCCATTTCGGTCGATCTCGAAGGCAAGCCGCTGGATACG ATCCTGGAGATCGTGCAGAGGCAGGGTTTCGCCACCGGAAACGTCACCACCGCGGAGCTGCAGGATGCTACGCCGGCCGT GCTCACCGCACATGTCACCGATCGGGACTGCAAGGGCCCCAAAGAGACCCTGGCGAGGTGCGCCGGGAACGCCGTCGACA ACGGCGGCAGGGGATCCATCTCCGAACAGCTGGTGAACACCCGCGCCGATATCAGCCTGGGTGGTGGCGGCAAGTACTTT GCGGAGACCATCACCGCCGGTGAGCACAAGGGCAAAACCTCGCTGGAGGTCGCCAAGGCTGCGGGATACCAATTACCCAC CACAGCAGGCGATCTGAACAAGGTGAACAATCTGGACAATCCGGTGCTGGGCATCTTCGGCACGGGAAACCTGCCGGTGC AGTGGGACAAGGTACCGGCCGCGGTACCCAACGGCGGCAAGCTGCCCCCAACCGTCTGCAGGCAAAATCCGGACCTGCCC AGGGACCAACCTCAGCTCTCCGCGATGACCACCAAAGCCATTGATCTACTGGTCAACTCGAAGAAGGGCAAGGACAAGGG CTTCTTCCTGCAGGTCGAGTCCGCGTCGATCGACAAACAGGATCACGCGGCCAATATCTGCGGACAGATCGGCGAGACCA TCGCCCTCGACGAGGCCGTCGCCGCCGCCGTCGACTTCGCCCGCCAGGACCGCAACACCCTGGTGATCGTGACCTCCGAT CACGGGCATTCCTCGCTCATCGTGCCCGATGACTTCAATAGCCCCACAACCCTGTCCGTCGCGGTGAAGACCGCCGACGG CGCCACCATGCGGATCATGTATCCCACTGCGCCGGAAGGGGAGTCACAGACCCACACCGGTACCCAGGTCCGCATCGCCG CATACGGCCCGGGTGCCGCGAACGTTTCCGGACTCACCGATCAGACCGACAACTTCAACACGATCGTGGGTGCACTACTC GGACCCAAGAGCCCCGACGCCGCAAGCGGCCCGTCCTGGTGGGCGGCCGGGGGGATCGCGGTGGTGGCGGCCGCCCTGGG TGCCGCGGCCGCGTTCCTCGTGGGTAAGCGCCAGACCTAG
Upstream 100 bases:
>100_bases GTTTCGCGCGGCGAAGGACGCCTGGTTCTGGACCTGCCCGCCGAATAGCCCACTGCGGAGGGTTTACCCGGCGTTCATCG GTTCCCGGCAAACTGGCCCG
Downstream 100 bases:
>100_bases CGCCCCACGCGCGAGCAGACACGCATGACAACAACCTCTGGATGGGCGCGCAATACGTGTCTGCTCGCCGACAACGCTAG GCCACCAACCGCTTCGGATT
Product: alkaline phosphatase
Products: NA
Alternate protein names: APase [H]
Number of amino acids: Translated: 519; Mature: 519
Protein sequence:
>519_residues MRIAHAATAVTSALTLALAPVAAAAPPSDAPEVPVGDIAKTGGANRTTGGRDGDKTADLRDSVRGRNAKNVILLIGDGMG TSEITSARNYQYGAAGTLPGLDALPITGEYTTFALTKDGPDKGKPDYVTDSAASGTGWATGTKTYNGAISVDLEGKPLDT ILEIVQRQGFATGNVTTAELQDATPAVLTAHVTDRDCKGPKETLARCAGNAVDNGGRGSISEQLVNTRADISLGGGGKYF AETITAGEHKGKTSLEVAKAAGYQLPTTAGDLNKVNNLDNPVLGIFGTGNLPVQWDKVPAAVPNGGKLPPTVCRQNPDLP RDQPQLSAMTTKAIDLLVNSKKGKDKGFFLQVESASIDKQDHAANICGQIGETIALDEAVAAAVDFARQDRNTLVIVTSD HGHSSLIVPDDFNSPTTLSVAVKTADGATMRIMYPTAPEGESQTHTGTQVRIAAYGPGAANVSGLTDQTDNFNTIVGALL GPKSPDAASGPSWWAAGGIAVVAAALGAAAAFLVGKRQT
Sequences:
>Translated_519_residues MRIAHAATAVTSALTLALAPVAAAAPPSDAPEVPVGDIAKTGGANRTTGGRDGDKTADLRDSVRGRNAKNVILLIGDGMG TSEITSARNYQYGAAGTLPGLDALPITGEYTTFALTKDGPDKGKPDYVTDSAASGTGWATGTKTYNGAISVDLEGKPLDT ILEIVQRQGFATGNVTTAELQDATPAVLTAHVTDRDCKGPKETLARCAGNAVDNGGRGSISEQLVNTRADISLGGGGKYF AETITAGEHKGKTSLEVAKAAGYQLPTTAGDLNKVNNLDNPVLGIFGTGNLPVQWDKVPAAVPNGGKLPPTVCRQNPDLP RDQPQLSAMTTKAIDLLVNSKKGKDKGFFLQVESASIDKQDHAANICGQIGETIALDEAVAAAVDFARQDRNTLVIVTSD HGHSSLIVPDDFNSPTTLSVAVKTADGATMRIMYPTAPEGESQTHTGTQVRIAAYGPGAANVSGLTDQTDNFNTIVGALL GPKSPDAASGPSWWAAGGIAVVAAALGAAAAFLVGKRQT >Mature_519_residues MRIAHAATAVTSALTLALAPVAAAAPPSDAPEVPVGDIAKTGGANRTTGGRDGDKTADLRDSVRGRNAKNVILLIGDGMG TSEITSARNYQYGAAGTLPGLDALPITGEYTTFALTKDGPDKGKPDYVTDSAASGTGWATGTKTYNGAISVDLEGKPLDT ILEIVQRQGFATGNVTTAELQDATPAVLTAHVTDRDCKGPKETLARCAGNAVDNGGRGSISEQLVNTRADISLGGGGKYF AETITAGEHKGKTSLEVAKAAGYQLPTTAGDLNKVNNLDNPVLGIFGTGNLPVQWDKVPAAVPNGGKLPPTVCRQNPDLP RDQPQLSAMTTKAIDLLVNSKKGKDKGFFLQVESASIDKQDHAANICGQIGETIALDEAVAAAVDFARQDRNTLVIVTSD HGHSSLIVPDDFNSPTTLSVAVKTADGATMRIMYPTAPEGESQTHTGTQVRIAAYGPGAANVSGLTDQTDNFNTIVGALL GPKSPDAASGPSWWAAGGIAVVAAALGAAAAFLVGKRQT
Specific function: Unknown
COG id: COG1785
COG function: function code P; Alkaline phosphatase
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alkaline phosphatase family [H]
Homologues:
Organism=Homo sapiens, GI116734717, Length=377, Percent_Identity=27.3209549071618, Blast_Score=90, Evalue=4e-18, Organism=Escherichia coli, GI48994877, Length=479, Percent_Identity=56.3674321503132, Blast_Score=481, Evalue=1e-137, Organism=Saccharomyces cerevisiae, GI6320689, Length=349, Percent_Identity=28.080229226361, Blast_Score=108, Evalue=3e-24, Organism=Drosophila melanogaster, GI24585213, Length=410, Percent_Identity=31.7073170731707, Blast_Score=114, Evalue=2e-25, Organism=Drosophila melanogaster, GI24651554, Length=509, Percent_Identity=27.5049115913556, Blast_Score=113, Evalue=3e-25, Organism=Drosophila melanogaster, GI21355981, Length=361, Percent_Identity=28.2548476454294, Blast_Score=113, Evalue=4e-25, Organism=Drosophila melanogaster, GI19921912, Length=474, Percent_Identity=28.0590717299578, Blast_Score=113, Evalue=4e-25, Organism=Drosophila melanogaster, GI21355149, Length=391, Percent_Identity=28.9002557544757, Blast_Score=109, Evalue=4e-24, Organism=Drosophila melanogaster, GI18859923, Length=399, Percent_Identity=26.3157894736842, Blast_Score=106, Evalue=3e-23, Organism=Drosophila melanogaster, GI21355151, Length=467, Percent_Identity=26.7665952890792, Blast_Score=105, Evalue=8e-23, Organism=Drosophila melanogaster, GI85725200, Length=468, Percent_Identity=26.2820512820513, Blast_Score=99, Evalue=8e-21, Organism=Drosophila melanogaster, GI85815833, Length=468, Percent_Identity=26.2820512820513, Blast_Score=99, Evalue=8e-21, Organism=Drosophila melanogaster, GI24651556, Length=496, Percent_Identity=26.8145161290323, Blast_Score=96, Evalue=6e-20, Organism=Drosophila melanogaster, GI24657827, Length=470, Percent_Identity=27.2340425531915, Blast_Score=85, Evalue=1e-16, Organism=Drosophila melanogaster, GI21358067, Length=473, Percent_Identity=25.369978858351, Blast_Score=81, Evalue=2e-15,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR001952 - InterPro: IPR018299 - InterPro: IPR017850 [H]
Pfam domain/function: PF00245 Alk_phosphatase [H]
EC number: =3.1.3.1 [H]
Molecular weight: Translated: 53161; Mature: 53161
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: PS00123 ALKALINE_PHOSPHATASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIAHAATAVTSALTLALAPVAAAAPPSDAPEVPVGDIAKTGGANRTTGGRDGDKTADLR CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHH DSVRGRNAKNVILLIGDGMGTSEITSARNYQYGAAGTLPGLDALPITGEYTTFALTKDGP HHHCCCCCCEEEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCC DKGKPDYVTDSAASGTGWATGTKTYNGAISVDLEGKPLDTILEIVQRQGFATGNVTTAEL CCCCCCCCCCCCCCCCCCCCCCEEECCEEEEEECCCCHHHHHHHHHHCCCCCCCEEEEEC QDATPAVLTAHVTDRDCKGPKETLARCAGNAVDNGGRGSISEQLVNTRADISLGGGGKYF CCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCEEECCCCHHH AETITAGEHKGKTSLEVAKAAGYQLPTTAGDLNKVNNLDNPVLGIFGTGNLPVQWDKVPA HHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHCCCCCCEEEEEECCCCCEEECCCCC AVPNGGKLPPTVCRQNPDLPRDQPQLSAMTTKAIDLLVNSKKGKDKGFFLQVESASIDKQ CCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHEEEECCCCCCCCEEEEEECCCCCCH DHAANICGQIGETIALDEAVAAAVDFARQDRNTLVIVTSDHGHSSLIVPDDFNSPTTLSV HHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEECCCCCCCEEEEE AVKTADGATMRIMYPTAPEGESQTHTGTQVRIAAYGPGAANVSGLTDQTDNFNTIVGALL EEEECCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHH GPKSPDAASGPSWWAAGGIAVVAAALGAAAAFLVGKRQT CCCCCCCCCCCCCCHHCHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRIAHAATAVTSALTLALAPVAAAAPPSDAPEVPVGDIAKTGGANRTTGGRDGDKTADLR CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHH DSVRGRNAKNVILLIGDGMGTSEITSARNYQYGAAGTLPGLDALPITGEYTTFALTKDGP HHHCCCCCCEEEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCC DKGKPDYVTDSAASGTGWATGTKTYNGAISVDLEGKPLDTILEIVQRQGFATGNVTTAEL CCCCCCCCCCCCCCCCCCCCCCEEECCEEEEEECCCCHHHHHHHHHHCCCCCCCEEEEEC QDATPAVLTAHVTDRDCKGPKETLARCAGNAVDNGGRGSISEQLVNTRADISLGGGGKYF CCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCEEECCCCHHH AETITAGEHKGKTSLEVAKAAGYQLPTTAGDLNKVNNLDNPVLGIFGTGNLPVQWDKVPA HHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHCCCCCCEEEEEECCCCCEEECCCCC AVPNGGKLPPTVCRQNPDLPRDQPQLSAMTTKAIDLLVNSKKGKDKGFFLQVESASIDKQ CCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHEEEECCCCCCCCEEEEEECCCCCCH DHAANICGQIGETIALDEAVAAAVDFARQDRNTLVIVTSDHGHSSLIVPDDFNSPTTLSV HHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEECCCCCCCEEEEE AVKTADGATMRIMYPTAPEGESQTHTGTQVRIAAYGPGAANVSGLTDQTDNFNTIVGALL EEEECCCCEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHH GPKSPDAASGPSWWAAGGIAVVAAALGAAAAFLVGKRQT CCCCCCCCCCCCCCHHCHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2129542 [H]