| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627189
Identifier: 169627189
GI number: 169627189
Start: 80364
End: 81578
Strand: Direct
Name: 169627189
Synonym: MAB_0084
Alternate gene names: NA
Gene position: 80364-81578 (Clockwise)
Preceding gene: 169627188
Following gene: 169627191
Centisome position: 1.59
GC content: 63.87
Gene sequence:
>1215_bases GTGAGGTGGCTCGCCGCGAGTGCGTTGATAGGAGTTTCGGCCGTACTTGTCGGGTGCTCGCCGTCGCCCCGCCCACCCGC GGACGGCGAAGCTGCCTCGAGCGCGCCTTTCCCGGACAGGCGCACACCCGACGGCGCGATCATCGTGACCCCCGACAATT TCGCGCGGGCGGAGACGGATCTGTACTTCGGAAACATCGTGAAGGATGGCGGTTTTGGCACGTTCCATCACATCCGTGAG CTGTCACCACTGGACCGCCAGCTGGTAATCCGGCAGAACCGCGACACGTTGTATTCCTCGGCGGTGTTCGATCTGGACGC CGGGCCGGTCAGCATTTCCACGCCCGATCCGGGCCAGCGGTTCATGTCGCTGCAGCTCATCACCGAAGACCACTACGTAC CTGCCGTTTTCTACGGCAAGGGTCAGCACACGATCACCAAGGAGCAGACCGGTACGCGCTACATTGCCGCGGTGGTGCGC ACCCTGGTCGATCCCGGAGATCCAGCGGACCTTGTACAGGTCCACGCCCTGCAGGACGGTGTTTCGGCGCGGCAAGAGAA GCCGGGCGCCTTCGATGTCCCCAAATGGGACGGCGCAAGTCAACGAAAGGTACGTGACGGTCTGCTTCAGCTGGCCGCGA CGCTGCCCGACACCACGGCGATGTTCGGGGCCAAGGCCACCACCGACCCGGTCCGCCATCTGATCGGCACCGCCTCCGCC TGGGGCGGGAATCCGGAGAAGGATGCCCTCTACCTCACCGTGAATCCCGCCAAGAACGACGGAACCACGGTGTACCGGCT CACTGTCGGGCCGGTACCGGTGGACGGCTTCTGGTCGGTCACCGTCTACAACAAGGACGGGTACTTCACGCCGAATGCGC GGAACGCCTACTCACTCAATAACATCACCGCGCGGCACGGCACCGGCGGACAGACCACGGTGCAATTCGGTGGATGCGCA CCGACCACGATGAATTGCCTGCCCATTACGCCGGGCTGGAACTACATGGTCAGGTTGTACCGGGCGCAACGCAGGTTCTC GACGGCAGCTGGGTCTTTCCCGAGGCGCTGCCCGTCGCGTAGACCAAACCTAATGGGGTGTAACGATCTTGGCGATCTGT TGGGCAATTTCGGCGCGCATATCCGCGTCGGACATGTCATCCAGGCCGAATCCCGCACGCAGGCTGGGCCCCATCAGCCG CCAGCCAAGTTGTAG
Upstream 100 bases:
>100_bases ACGCAGCGACTTCTTCCAAACGCTGCGCGATATCGCCGGCGAGGATGCTCCCTGTCCATAGGGTGCGTATCGCACGGCAG GGCCCGGTACTTTCGAGGTC
Downstream 100 bases:
>100_bases CGCTATCGCGTGGGCCGCGGCCAGCCGGGCATCACGCTCATCGGCGTGCCCGGGGCGTACCTGTTCGAGCAGCCACGCCA TTCCCGGCTTGCGCTCCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 404; Mature: 404
Protein sequence:
>404_residues MRWLAASALIGVSAVLVGCSPSPRPPADGEAASSAPFPDRRTPDGAIIVTPDNFARAETDLYFGNIVKDGGFGTFHHIRE LSPLDRQLVIRQNRDTLYSSAVFDLDAGPVSISTPDPGQRFMSLQLITEDHYVPAVFYGKGQHTITKEQTGTRYIAAVVR TLVDPGDPADLVQVHALQDGVSARQEKPGAFDVPKWDGASQRKVRDGLLQLAATLPDTTAMFGAKATTDPVRHLIGTASA WGGNPEKDALYLTVNPAKNDGTTVYRLTVGPVPVDGFWSVTVYNKDGYFTPNARNAYSLNNITARHGTGGQTTVQFGGCA PTTMNCLPITPGWNYMVRLYRAQRRFSTAAGSFPRRCPSRRPNLMGCNDLGDLLGNFGAHIRVGHVIQAESRTQAGPHQP PAKL
Sequences:
>Translated_404_residues MRWLAASALIGVSAVLVGCSPSPRPPADGEAASSAPFPDRRTPDGAIIVTPDNFARAETDLYFGNIVKDGGFGTFHHIRE LSPLDRQLVIRQNRDTLYSSAVFDLDAGPVSISTPDPGQRFMSLQLITEDHYVPAVFYGKGQHTITKEQTGTRYIAAVVR TLVDPGDPADLVQVHALQDGVSARQEKPGAFDVPKWDGASQRKVRDGLLQLAATLPDTTAMFGAKATTDPVRHLIGTASA WGGNPEKDALYLTVNPAKNDGTTVYRLTVGPVPVDGFWSVTVYNKDGYFTPNARNAYSLNNITARHGTGGQTTVQFGGCA PTTMNCLPITPGWNYMVRLYRAQRRFSTAAGSFPRRCPSRRPNLMGCNDLGDLLGNFGAHIRVGHVIQAESRTQAGPHQP PAKL >Mature_404_residues MRWLAASALIGVSAVLVGCSPSPRPPADGEAASSAPFPDRRTPDGAIIVTPDNFARAETDLYFGNIVKDGGFGTFHHIRE LSPLDRQLVIRQNRDTLYSSAVFDLDAGPVSISTPDPGQRFMSLQLITEDHYVPAVFYGKGQHTITKEQTGTRYIAAVVR TLVDPGDPADLVQVHALQDGVSARQEKPGAFDVPKWDGASQRKVRDGLLQLAATLPDTTAMFGAKATTDPVRHLIGTASA WGGNPEKDALYLTVNPAKNDGTTVYRLTVGPVPVDGFWSVTVYNKDGYFTPNARNAYSLNNITARHGTGGQTTVQFGGCA PTTMNCLPITPGWNYMVRLYRAQRRFSTAAGSFPRRCPSRRPNLMGCNDLGDLLGNFGAHIRVGHVIQAESRTQAGPHQP PAKL
Specific function: Unknown
COG id: COG5361
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43596; Mature: 43596
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWLAASALIGVSAVLVGCSPSPRPPADGEAASSAPFPDRRTPDGAIIVTPDNFARAETD CCHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCC LYFGNIVKDGGFGTFHHIRELSPLDRQLVIRQNRDTLYSSAVFDLDAGPVSISTPDPGQR EEECCEEECCCCCHHHHHHHCCCCCCEEEEECCCCHHHHHEEEECCCCCEEECCCCCHHH FMSLQLITEDHYVPAVFYGKGQHTITKEQTGTRYIAAVVRTLVDPGDPADLVQVHALQDG EEEEEEEECCCCCCEEEECCCCCEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHH VSARQEKPGAFDVPKWDGASQRKVRDGLLQLAATLPDTTAMFGAKATTDPVRHLIGTASA HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHCHHC WGGNPEKDALYLTVNPAKNDGTTVYRLTVGPVPVDGFWSVTVYNKDGYFTPNARNAYSLN CCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCEEEEEEECCCCEECCCCCCCEEEC NITARHGTGGQTTVQFGGCAPTTMNCLPITPGWNYMVRLYRAQRRFSTAAGSFPRRCPSR CEEEECCCCCCEEEEECCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHCCCC RPNLMGCNDLGDLLGNFGAHIRVGHVIQAESRTQAGPHQPPAKL CCCCCCCHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCCC >Mature Secondary Structure MRWLAASALIGVSAVLVGCSPSPRPPADGEAASSAPFPDRRTPDGAIIVTPDNFARAETD CCHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCC LYFGNIVKDGGFGTFHHIRELSPLDRQLVIRQNRDTLYSSAVFDLDAGPVSISTPDPGQR EEECCEEECCCCCHHHHHHHCCCCCCEEEEECCCCHHHHHEEEECCCCCEEECCCCCHHH FMSLQLITEDHYVPAVFYGKGQHTITKEQTGTRYIAAVVRTLVDPGDPADLVQVHALQDG EEEEEEEECCCCCCEEEECCCCCEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHH VSARQEKPGAFDVPKWDGASQRKVRDGLLQLAATLPDTTAMFGAKATTDPVRHLIGTASA HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHCHHC WGGNPEKDALYLTVNPAKNDGTTVYRLTVGPVPVDGFWSVTVYNKDGYFTPNARNAYSLN CCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCEEEEEEECCCCEECCCCCCCEEEC NITARHGTGGQTTVQFGGCAPTTMNCLPITPGWNYMVRLYRAQRRFSTAAGSFPRRCPSR CEEEECCCCCCEEEEECCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHCCCC RPNLMGCNDLGDLLGNFGAHIRVGHVIQAESRTQAGPHQPPAKL CCCCCCCHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA