Definition Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence.
Accession NC_010397
Length 5,067,172

Click here to switch to the map view.

The map label for this gene is 169627189

Identifier: 169627189

GI number: 169627189

Start: 80364

End: 81578

Strand: Direct

Name: 169627189

Synonym: MAB_0084

Alternate gene names: NA

Gene position: 80364-81578 (Clockwise)

Preceding gene: 169627188

Following gene: 169627191

Centisome position: 1.59

GC content: 63.87

Gene sequence:

>1215_bases
GTGAGGTGGCTCGCCGCGAGTGCGTTGATAGGAGTTTCGGCCGTACTTGTCGGGTGCTCGCCGTCGCCCCGCCCACCCGC
GGACGGCGAAGCTGCCTCGAGCGCGCCTTTCCCGGACAGGCGCACACCCGACGGCGCGATCATCGTGACCCCCGACAATT
TCGCGCGGGCGGAGACGGATCTGTACTTCGGAAACATCGTGAAGGATGGCGGTTTTGGCACGTTCCATCACATCCGTGAG
CTGTCACCACTGGACCGCCAGCTGGTAATCCGGCAGAACCGCGACACGTTGTATTCCTCGGCGGTGTTCGATCTGGACGC
CGGGCCGGTCAGCATTTCCACGCCCGATCCGGGCCAGCGGTTCATGTCGCTGCAGCTCATCACCGAAGACCACTACGTAC
CTGCCGTTTTCTACGGCAAGGGTCAGCACACGATCACCAAGGAGCAGACCGGTACGCGCTACATTGCCGCGGTGGTGCGC
ACCCTGGTCGATCCCGGAGATCCAGCGGACCTTGTACAGGTCCACGCCCTGCAGGACGGTGTTTCGGCGCGGCAAGAGAA
GCCGGGCGCCTTCGATGTCCCCAAATGGGACGGCGCAAGTCAACGAAAGGTACGTGACGGTCTGCTTCAGCTGGCCGCGA
CGCTGCCCGACACCACGGCGATGTTCGGGGCCAAGGCCACCACCGACCCGGTCCGCCATCTGATCGGCACCGCCTCCGCC
TGGGGCGGGAATCCGGAGAAGGATGCCCTCTACCTCACCGTGAATCCCGCCAAGAACGACGGAACCACGGTGTACCGGCT
CACTGTCGGGCCGGTACCGGTGGACGGCTTCTGGTCGGTCACCGTCTACAACAAGGACGGGTACTTCACGCCGAATGCGC
GGAACGCCTACTCACTCAATAACATCACCGCGCGGCACGGCACCGGCGGACAGACCACGGTGCAATTCGGTGGATGCGCA
CCGACCACGATGAATTGCCTGCCCATTACGCCGGGCTGGAACTACATGGTCAGGTTGTACCGGGCGCAACGCAGGTTCTC
GACGGCAGCTGGGTCTTTCCCGAGGCGCTGCCCGTCGCGTAGACCAAACCTAATGGGGTGTAACGATCTTGGCGATCTGT
TGGGCAATTTCGGCGCGCATATCCGCGTCGGACATGTCATCCAGGCCGAATCCCGCACGCAGGCTGGGCCCCATCAGCCG
CCAGCCAAGTTGTAG

Upstream 100 bases:

>100_bases
ACGCAGCGACTTCTTCCAAACGCTGCGCGATATCGCCGGCGAGGATGCTCCCTGTCCATAGGGTGCGTATCGCACGGCAG
GGCCCGGTACTTTCGAGGTC

Downstream 100 bases:

>100_bases
CGCTATCGCGTGGGCCGCGGCCAGCCGGGCATCACGCTCATCGGCGTGCCCGGGGCGTACCTGTTCGAGCAGCCACGCCA
TTCCCGGCTTGCGCTCCTGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MRWLAASALIGVSAVLVGCSPSPRPPADGEAASSAPFPDRRTPDGAIIVTPDNFARAETDLYFGNIVKDGGFGTFHHIRE
LSPLDRQLVIRQNRDTLYSSAVFDLDAGPVSISTPDPGQRFMSLQLITEDHYVPAVFYGKGQHTITKEQTGTRYIAAVVR
TLVDPGDPADLVQVHALQDGVSARQEKPGAFDVPKWDGASQRKVRDGLLQLAATLPDTTAMFGAKATTDPVRHLIGTASA
WGGNPEKDALYLTVNPAKNDGTTVYRLTVGPVPVDGFWSVTVYNKDGYFTPNARNAYSLNNITARHGTGGQTTVQFGGCA
PTTMNCLPITPGWNYMVRLYRAQRRFSTAAGSFPRRCPSRRPNLMGCNDLGDLLGNFGAHIRVGHVIQAESRTQAGPHQP
PAKL

Sequences:

>Translated_404_residues
MRWLAASALIGVSAVLVGCSPSPRPPADGEAASSAPFPDRRTPDGAIIVTPDNFARAETDLYFGNIVKDGGFGTFHHIRE
LSPLDRQLVIRQNRDTLYSSAVFDLDAGPVSISTPDPGQRFMSLQLITEDHYVPAVFYGKGQHTITKEQTGTRYIAAVVR
TLVDPGDPADLVQVHALQDGVSARQEKPGAFDVPKWDGASQRKVRDGLLQLAATLPDTTAMFGAKATTDPVRHLIGTASA
WGGNPEKDALYLTVNPAKNDGTTVYRLTVGPVPVDGFWSVTVYNKDGYFTPNARNAYSLNNITARHGTGGQTTVQFGGCA
PTTMNCLPITPGWNYMVRLYRAQRRFSTAAGSFPRRCPSRRPNLMGCNDLGDLLGNFGAHIRVGHVIQAESRTQAGPHQP
PAKL
>Mature_404_residues
MRWLAASALIGVSAVLVGCSPSPRPPADGEAASSAPFPDRRTPDGAIIVTPDNFARAETDLYFGNIVKDGGFGTFHHIRE
LSPLDRQLVIRQNRDTLYSSAVFDLDAGPVSISTPDPGQRFMSLQLITEDHYVPAVFYGKGQHTITKEQTGTRYIAAVVR
TLVDPGDPADLVQVHALQDGVSARQEKPGAFDVPKWDGASQRKVRDGLLQLAATLPDTTAMFGAKATTDPVRHLIGTASA
WGGNPEKDALYLTVNPAKNDGTTVYRLTVGPVPVDGFWSVTVYNKDGYFTPNARNAYSLNNITARHGTGGQTTVQFGGCA
PTTMNCLPITPGWNYMVRLYRAQRRFSTAAGSFPRRCPSRRPNLMGCNDLGDLLGNFGAHIRVGHVIQAESRTQAGPHQP
PAKL

Specific function: Unknown

COG id: COG5361

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43596; Mature: 43596

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWLAASALIGVSAVLVGCSPSPRPPADGEAASSAPFPDRRTPDGAIIVTPDNFARAETD
CCHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCC
LYFGNIVKDGGFGTFHHIRELSPLDRQLVIRQNRDTLYSSAVFDLDAGPVSISTPDPGQR
EEECCEEECCCCCHHHHHHHCCCCCCEEEEECCCCHHHHHEEEECCCCCEEECCCCCHHH
FMSLQLITEDHYVPAVFYGKGQHTITKEQTGTRYIAAVVRTLVDPGDPADLVQVHALQDG
EEEEEEEECCCCCCEEEECCCCCEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
VSARQEKPGAFDVPKWDGASQRKVRDGLLQLAATLPDTTAMFGAKATTDPVRHLIGTASA
HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHCHHC
WGGNPEKDALYLTVNPAKNDGTTVYRLTVGPVPVDGFWSVTVYNKDGYFTPNARNAYSLN
CCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCEEEEEEECCCCEECCCCCCCEEEC
NITARHGTGGQTTVQFGGCAPTTMNCLPITPGWNYMVRLYRAQRRFSTAAGSFPRRCPSR
CEEEECCCCCCEEEEECCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHCCCC
RPNLMGCNDLGDLLGNFGAHIRVGHVIQAESRTQAGPHQPPAKL
CCCCCCCHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MRWLAASALIGVSAVLVGCSPSPRPPADGEAASSAPFPDRRTPDGAIIVTPDNFARAETD
CCHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCC
LYFGNIVKDGGFGTFHHIRELSPLDRQLVIRQNRDTLYSSAVFDLDAGPVSISTPDPGQR
EEECCEEECCCCCHHHHHHHCCCCCCEEEEECCCCHHHHHEEEECCCCCEEECCCCCHHH
FMSLQLITEDHYVPAVFYGKGQHTITKEQTGTRYIAAVVRTLVDPGDPADLVQVHALQDG
EEEEEEEECCCCCCEEEECCCCCEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
VSARQEKPGAFDVPKWDGASQRKVRDGLLQLAATLPDTTAMFGAKATTDPVRHLIGTASA
HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHCHHC
WGGNPEKDALYLTVNPAKNDGTTVYRLTVGPVPVDGFWSVTVYNKDGYFTPNARNAYSLN
CCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCEEEEEEECCCCEECCCCCCCEEEC
NITARHGTGGQTTVQFGGCAPTTMNCLPITPGWNYMVRLYRAQRRFSTAAGSFPRRCPSR
CEEEECCCCCCEEEEECCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHCCCC
RPNLMGCNDLGDLLGNFGAHIRVGHVIQAESRTQAGPHQPPAKL
CCCCCCCHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA