| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is tauD [C]
Identifier: 169627191
GI number: 169627191
Start: 82086
End: 83018
Strand: Direct
Name: tauD [C]
Synonym: MAB_0086
Alternate gene names: 169627191
Gene position: 82086-83018 (Clockwise)
Preceding gene: 169627189
Following gene: 169627196
Centisome position: 1.62
GC content: 62.92
Gene sequence:
>933_bases ATGAGCAGCGATTTGCGGGTCGTGAAGCTGGGCGAGAACATCGGCGCCCGTATCGACGGAGTGCGCCTCGGGGAGGTGGA CACCGCAACCGCGAGTGCCATCAATGAGGCGATGTTGGAGCACAAGGTGGTCTTCTTTCGTGGGCAACACCATGTGGACG ACGAGGTGCAATTCGCGTTTGCGAAGAGCATGGGCATACCCACGACTCCGCATCCGACGCTGACTTCGAGTGACGTCAAG GTGCTCCCGATCGACTCAGAGGAGGGCGGCCGCGCCAACCAGTGGCACACCGACGTGACCTTCGTGGACCGCATCCCCAA GGCCTCCATTCTGCGTGCGGTCGAGCTGCCGCCCTACGGCGGAACCACCACGTGGACGTCGACGGTCGCCGCGTACCGAC AGCTGCCCAAGCCGCTGCAGGATCTGGCGGACAACCTGTGGGCCATGCACAACAATCAATTCGATTACACCCAGGTCGAT CCCGCCAAGGTGGCCGAGTTGTTGGCCAAGGCTGGATCCGGCTCGAAGTACGTCCGTGAGTTTGGTGCGACACATTTCGA GACGCACCACCCGGTGGTCCGGGTGCACCCGGAGACGGGCGAGAAGGCGCTGCTGCTGGGCAACTTCGTCAAGCGGATCT TGGATGTGAGTGCCAGCGAGTCGCAGGCGCTGTTCCGGATGTTCCAGGATCGGGTTACCTGGCTGGAGAACACTATTCGA TGGAGCTGGGAGCTCGGCGACGTGGCCATGTGGGACAACCGCGCTACCCAGCACTACGCCATCTCTGATTACGGTGATCA GCCACGCCGCATGCACCGCGTCACGCTGGCCGGTGACGTTCCGGTGGGGGTCAATGGTGAGAGCAGCCGGGTGATCGCCG GCGATGCCAGCGACTACTCGGTGATCGACAATCCGAAGCGGTTGGTGGCCTAG
Upstream 100 bases:
>100_bases TGGCGTCCGTTGCCTCCGGTGTAGTCATGTGTGTACAGTAGCGGATGACCAAAGTGTAGTCAGTTGACTACACCGGATTA TCGGACGGAAGGAACGGGTC
Downstream 100 bases:
>100_bases CGTTGTCGGCGAGCAGACACGTATTGCGCGCCCATCCAGAGGTTGTTGTCATGCGTGTCTGCTCGCGCGTGGGGCGCTAG GTCTGGCGCTTACCCACGAG
Product: putative taurine dioxygenase
Products: Aminoacetaldehyde; CO2; H+; Sulfite; Succinate [C]
Alternate protein names: NA
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MSSDLRVVKLGENIGARIDGVRLGEVDTATASAINEAMLEHKVVFFRGQHHVDDEVQFAFAKSMGIPTTPHPTLTSSDVK VLPIDSEEGGRANQWHTDVTFVDRIPKASILRAVELPPYGGTTTWTSTVAAYRQLPKPLQDLADNLWAMHNNQFDYTQVD PAKVAELLAKAGSGSKYVREFGATHFETHHPVVRVHPETGEKALLLGNFVKRILDVSASESQALFRMFQDRVTWLENTIR WSWELGDVAMWDNRATQHYAISDYGDQPRRMHRVTLAGDVPVGVNGESSRVIAGDASDYSVIDNPKRLVA
Sequences:
>Translated_310_residues MSSDLRVVKLGENIGARIDGVRLGEVDTATASAINEAMLEHKVVFFRGQHHVDDEVQFAFAKSMGIPTTPHPTLTSSDVK VLPIDSEEGGRANQWHTDVTFVDRIPKASILRAVELPPYGGTTTWTSTVAAYRQLPKPLQDLADNLWAMHNNQFDYTQVD PAKVAELLAKAGSGSKYVREFGATHFETHHPVVRVHPETGEKALLLGNFVKRILDVSASESQALFRMFQDRVTWLENTIR WSWELGDVAMWDNRATQHYAISDYGDQPRRMHRVTLAGDVPVGVNGESSRVIAGDASDYSVIDNPKRLVA >Mature_309_residues SSDLRVVKLGENIGARIDGVRLGEVDTATASAINEAMLEHKVVFFRGQHHVDDEVQFAFAKSMGIPTTPHPTLTSSDVKV LPIDSEEGGRANQWHTDVTFVDRIPKASILRAVELPPYGGTTTWTSTVAAYRQLPKPLQDLADNLWAMHNNQFDYTQVDP AKVAELLAKAGSGSKYVREFGATHFETHHPVVRVHPETGEKALLLGNFVKRILDVSASESQALFRMFQDRVTWLENTIRW SWELGDVAMWDNRATQHYAISDYGDQPRRMHRVTLAGDVPVGVNGESSRVIAGDASDYSVIDNPKRLVA
Specific function: Catalyzes The Conversion Of Taurine And Alpha Ketoglutarate To Sulfite, Aminoacetaldehyde And Succinate. Required For The Utilization Of Taurine (2-Aminoethanesulfonic Acid) As An Alternative Sulfur Source. Pentane-Sulfonic Acid, 3- (N-Morpholino)Propanes
COG id: COG2175
COG function: function code Q; Probable taurine catabolism dioxygenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tfdA dioxygenase family [H]
Homologues:
Organism=Escherichia coli, GI1786565, Length=287, Percent_Identity=37.9790940766551, Blast_Score=168, Evalue=4e-43, Organism=Saccharomyces cerevisiae, GI6322971, Length=296, Percent_Identity=29.0540540540541, Blast_Score=104, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003819 [H]
Pfam domain/function: PF02668 TauD [H]
EC number: 1.14.11.17 [C]
Molecular weight: Translated: 34430; Mature: 34299
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSDLRVVKLGENIGARIDGVRLGEVDTATASAINEAMLEHKVVFFRGQHHVDDEVQFAF CCCCCEEEEECCCCCCEECCEEECCCCHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHH AKSMGIPTTPHPTLTSSDVKVLPIDSEEGGRANQWHTDVTFVDRIPKASILRAVELPPYG HHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHCCCHHHHHHEEECCCCC GTTTWTSTVAAYRQLPKPLQDLADNLWAMHNNQFDYTQVDPAKVAELLAKAGSGSKYVRE CCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHH FGATHFETHHPVVRVHPETGEKALLLGNFVKRILDVSASESQALFRMFQDRVTWLENTIR HCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEE WSWELGDVAMWDNRATQHYAISDYGDQPRRMHRVTLAGDVPVGVNGESSRVIAGDASDYS EEEEECCEEEECCCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCC VIDNPKRLVA CCCCCHHHCC >Mature Secondary Structure SSDLRVVKLGENIGARIDGVRLGEVDTATASAINEAMLEHKVVFFRGQHHVDDEVQFAF CCCCEEEEECCCCCCEECCEEECCCCHHHHHHHHHHHHHHEEEEEECCCCCCHHHHHHH AKSMGIPTTPHPTLTSSDVKVLPIDSEEGGRANQWHTDVTFVDRIPKASILRAVELPPYG HHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHCCCHHHHHHEEECCCCC GTTTWTSTVAAYRQLPKPLQDLADNLWAMHNNQFDYTQVDPAKVAELLAKAGSGSKYVRE CCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHH FGATHFETHHPVVRVHPETGEKALLLGNFVKRILDVSASESQALFRMFQDRVTWLENTIR HCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEE WSWELGDVAMWDNRATQHYAISDYGDQPRRMHRVTLAGDVPVGVNGESSRVIAGDASDYS EEEEECCEEEECCCCCCEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCC VIDNPKRLVA CCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: Ascorbate. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2-Oxoglutarate; O2; Taurine [C]
Specific reaction: 2-Oxoglutarate + O2 + Taurine --> Aminoacetaldehyde + CO2 + H+ + Sulfite + Succinate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]