| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627187
Identifier: 169627187
GI number: 169627187
Start: 79114
End: 79803
Strand: Reverse
Name: 169627187
Synonym: MAB_0082c
Alternate gene names: NA
Gene position: 79803-79114 (Counterclockwise)
Preceding gene: 169627190
Following gene: 169627185
Centisome position: 1.57
GC content: 62.9
Gene sequence:
>690_bases ATGGCAGCAATCAGTTCGCCCGGCGAACCGAATCTTGCTGCCACGAGCTGGACGATCCTCGGCATGCTGTCCTACGAGGA AGAGGTTTCCGGCTACGACATCAAGAAGTGGGCCGACTGGAGCATCAGCTACTTCTACTGGAGCCCGTCTTTCAGTCAGG TCTATTCCGAGCTGAGGAAACTGGAGAAGATCGGCTACGCCACCTCGCGTGTGGACCATGACAACGGTGCCCGCAGCCGG CGACTGTACAAGATCACCCCGGCGGGCATGGCGGCGATGAGTCAGTGGGCCAATGAGACGCCCGCTGAGCCGCAAGTGCT CAAACACAGTGTGGTGCTGCGTGTGATGCAGGGCCACATGACAGATCCTGCCCGGCTCAAGGAGATTCTGGAACGACACA TCGAGTACGCCGAGAATATGCAGCGGCGCGCGGCACTGGACGCCGCCGGTGCTGCGGCGCAGCCCGCCTGGGCGTACTCG CGCGTGGCGCTCAAGTGGGCGGAGCGCTACTACGCGGCCGAGCGCGATCTGGCGATGATGATGATCGAGGATCTGGCGGA GGCGGCCGAGGAGTTCGACAAGGCCGGGCCGGACGGTGGAACACCTCGCCTCGTTCCCGGCTACTGGCGTGAGGTCGAGA AGCGAGTGGACGCCGAAAAGCTTTCTACACAGCACGATACGGCGGACTGA
Upstream 100 bases:
>100_bases TCCTGCTCATCCATATCAGTGATGTTGACACAGCTACTGTCGTCCCGCTGAGCGGCCCGGGAGCACCGTACCCGCTATCG GCCGTTGCTACCCTTGATCG
Downstream 100 bases:
>100_bases TCACCGCGCGGCCGCGTCATGTGCCGCGATGTATCCGTAGACGAGTCCCTGCGCAATTGTTGCCCCGGCACCCGGATAGG TGGCACCGAACGCGTTGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulator PadR-Like Family; PadR-Like Family Transcriptional Regulator; Transcriptional Regulator PadR Family Protein; Transcriptional Regulator; Padr Family Transcriptional Regulator
Number of amino acids: Translated: 229; Mature: 228
Protein sequence:
>229_residues MAAISSPGEPNLAATSWTILGMLSYEEEVSGYDIKKWADWSISYFYWSPSFSQVYSELRKLEKIGYATSRVDHDNGARSR RLYKITPAGMAAMSQWANETPAEPQVLKHSVVLRVMQGHMTDPARLKEILERHIEYAENMQRRAALDAAGAAAQPAWAYS RVALKWAERYYAAERDLAMMMIEDLAEAAEEFDKAGPDGGTPRLVPGYWREVEKRVDAEKLSTQHDTAD
Sequences:
>Translated_229_residues MAAISSPGEPNLAATSWTILGMLSYEEEVSGYDIKKWADWSISYFYWSPSFSQVYSELRKLEKIGYATSRVDHDNGARSR RLYKITPAGMAAMSQWANETPAEPQVLKHSVVLRVMQGHMTDPARLKEILERHIEYAENMQRRAALDAAGAAAQPAWAYS RVALKWAERYYAAERDLAMMMIEDLAEAAEEFDKAGPDGGTPRLVPGYWREVEKRVDAEKLSTQHDTAD >Mature_228_residues AAISSPGEPNLAATSWTILGMLSYEEEVSGYDIKKWADWSISYFYWSPSFSQVYSELRKLEKIGYATSRVDHDNGARSRR LYKITPAGMAAMSQWANETPAEPQVLKHSVVLRVMQGHMTDPARLKEILERHIEYAENMQRRAALDAAGAAAQPAWAYSR VALKWAERYYAAERDLAMMMIEDLAEAAEEFDKAGPDGGTPRLVPGYWREVEKRVDAEKLSTQHDTAD
Specific function: Unknown
COG id: COG1695
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25854; Mature: 25723
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAISSPGEPNLAATSWTILGMLSYEEEVSGYDIKKWADWSISYFYWSPSFSQVYSELRK CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCEEEEEEECCCHHHHHHHHHH LEKIGYATSRVDHDNGARSRRLYKITPAGMAAMSQWANETPAEPQVLKHSVVLRVMQGHM HHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC TDPARLKEILERHIEYAENMQRRAALDAAGAAAQPAWAYSRVALKWAERYYAAERDLAMM CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH MIEDLAEAAEEFDKAGPDGGTPRLVPGYWREVEKRVDAEKLSTQHDTAD HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AAISSPGEPNLAATSWTILGMLSYEEEVSGYDIKKWADWSISYFYWSPSFSQVYSELRK CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCEEEEEEECCCHHHHHHHHHH LEKIGYATSRVDHDNGARSRRLYKITPAGMAAMSQWANETPAEPQVLKHSVVLRVMQGHM HHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC TDPARLKEILERHIEYAENMQRRAALDAAGAAAQPAWAYSRVALKWAERYYAAERDLAMM CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH MIEDLAEAAEEFDKAGPDGGTPRLVPGYWREVEKRVDAEKLSTQHDTAD HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA