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The map label for this gene is 169627190

Identifier: 169627190

GI number: 169627190

Start: 81453

End: 82013

Strand: Reverse

Name: 169627190

Synonym: MAB_0085c

Alternate gene names: NA

Gene position: 82013-81453 (Counterclockwise)

Preceding gene: 169627192

Following gene: 169627187

Centisome position: 1.62

GC content: 67.02

Gene sequence:

>561_bases
ATGACTACACCGGAGGCAACGGACGCCAAACCCGTCGGCAAGGAGGAGGTCGTGGAAGCCGTCCTGACCGCCGCTTCCGC
ACTGTTCGCCGAGAAGGGCCCGGCCGCGACATCGATCCGCGAGGTCGCTACCCGGGCAGGGGTTAACCACGGCCTGGTCC
ACCGCCATTTCGGCAGCAAGCGTCAGCTGCTGGCGGCAACCCTGCAGCACCTCGCCGACACCGCGGCAGCCGTGCGCGAG
GCAGGAGCCCCCATCGAGGAACTCGAGGCCGCGCACGACCTGCAACTGCGCGTGATGGTCCGTTCCACGCTGGACGGCTT
TCCCATCGAAGAGCTTCAGGAGCGCAAGCCGGGAATGGCGTGGCTGCTCGAACAGGTACGCCCCGGGCACGCCGATGAGC
GTGATGCCCGGCTGGCCGCGGCCCACGCGATAGCGCTACAACTTGGCTGGCGGCTGATGGGGCCCAGCCTGCGTGCGGGA
TTCGGCCTGGATGACATGTCCGACGCGGATATGCGCGCCGAAATTGCCCAACAGATCGCCAAGATCGTTACACCCCATTA
G

Upstream 100 bases:

>100_bases
GCTTCACGACCCGCAAATCGCTGCTCATGACCCGTTCCTTCCGTCCGATAATCCGGTGTAGTCAACTGACTACACTTTGG
TCATCCGCTACTGTACACAC

Downstream 100 bases:

>100_bases
GTTTGGTCTACGCGACGGGCAGCGCCTCGGGAAAGACCCAGCTGCCGTCGAGAACCTGCGTTGCGCCCGGTACAACCTGA
CCATGTAGTTCCAGCCCGGC

Product: putative transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MTTPEATDAKPVGKEEVVEAVLTAASALFAEKGPAATSIREVATRAGVNHGLVHRHFGSKRQLLAATLQHLADTAAAVRE
AGAPIEELEAAHDLQLRVMVRSTLDGFPIEELQERKPGMAWLLEQVRPGHADERDARLAAAHAIALQLGWRLMGPSLRAG
FGLDDMSDADMRAEIAQQIAKIVTPH

Sequences:

>Translated_186_residues
MTTPEATDAKPVGKEEVVEAVLTAASALFAEKGPAATSIREVATRAGVNHGLVHRHFGSKRQLLAATLQHLADTAAAVRE
AGAPIEELEAAHDLQLRVMVRSTLDGFPIEELQERKPGMAWLLEQVRPGHADERDARLAAAHAIALQLGWRLMGPSLRAG
FGLDDMSDADMRAEIAQQIAKIVTPH
>Mature_185_residues
TTPEATDAKPVGKEEVVEAVLTAASALFAEKGPAATSIREVATRAGVNHGLVHRHFGSKRQLLAATLQHLADTAAAVREA
GAPIEELEAAHDLQLRVMVRSTLDGFPIEELQERKPGMAWLLEQVRPGHADERDARLAAAHAIALQLGWRLMGPSLRAGF
GLDDMSDADMRAEIAQQIAKIVTPH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 19986; Mature: 19855

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTPEATDAKPVGKEEVVEAVLTAASALFAEKGPAATSIREVATRAGVNHGLVHRHFGSK
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHCCCH
RQLLAATLQHLADTAAAVREAGAPIEELEAAHDLQLRVMVRSTLDGFPIEELQERKPGMA
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHH
WLLEQVRPGHADERDARLAAAHAIALQLGWRLMGPSLRAGFGLDDMSDADMRAEIAQQIA
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCHHHHHHHHHHHH
KIVTPH
HHHCCC
>Mature Secondary Structure 
TTPEATDAKPVGKEEVVEAVLTAASALFAEKGPAATSIREVATRAGVNHGLVHRHFGSK
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHCCCH
RQLLAATLQHLADTAAAVREAGAPIEELEAAHDLQLRVMVRSTLDGFPIEELQERKPGMA
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCHH
WLLEQVRPGHADERDARLAAAHAIALQLGWRLMGPSLRAGFGLDDMSDADMRAEIAQQIA
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCHHHHHHHHHHHH
KIVTPH
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]