| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627134
Identifier: 169627134
GI number: 169627134
Start: 26466
End: 27365
Strand: Reverse
Name: 169627134
Synonym: MAB_0027c
Alternate gene names: NA
Gene position: 27365-26466 (Counterclockwise)
Preceding gene: 169627135
Following gene: 169627131
Centisome position: 0.54
GC content: 65.44
Gene sequence:
>900_bases ATGACACGGACCGACGGCGATCAATGGGACATTGTCAGCAGCGTCGGTTTCACGGCCCTGATGGTGTCCTCGTTCCGGGC GCTTGAGACCACCCGGACCGAACCGCTGATCCGCGACGAGTACGCCCGTGCCTTCGTTGAGGCCTCCGGCGAACCTCGTC TCACCGAGGCGCTGGCCGCGGGCACGCCCGAGTCCGAGTGGGACACCGCCACCGTCTACCTGGTCAACCATCTCGCCGTG CGTACCAAGTATTTCGACGAATTCTTCGCGGCTGCAACAGGTTCCGGCATCCAACAGGTAGTGATCCTGGCCGCCGGCCT GGATTCCCGGGTCTACCGGCTGCCCTGGCCCGACGGCACCGTCGTGTACGAGCTCGATCAGCCGAAAGTCCTCGAATTCA AGGATCACGTGCTGCGCGAAGAGCACGCGGTACCGCTGGCCGAGCGGCGCGAGGTCGCCGTGGACCTTCGGGATGACTGG ATCGCGGCCCTGCGGACGGCGGGCTTCGACGCCACTAAACCCACTGCCTGGCTCGCCGAGGGTCTGCTGGCATATCTGCC CGGGGCCGCCCAGGACGCGCTGTTCGAGAACATCACCGCGCACTCCGCACCCGGCAGCTTCCTTGCCACCGAATGGCGCA GGCGGCAAGCGACCGCTGGTCAATGGCAGGACGCCGTGAACAAACTCAAGCCGGAATTCATCAAGGACATCAGCATCGGC TCCCTCATCTACGACGATGAGCGCCAGGACCCCATCGAGTGGCTGCGCGAGCATGGCTGGCAGGTCGACACCGCCAACCG GCTTGAGCAGGCCGCCGCCTATGGCAGGCCTGCCCCCAGTGAGCACAGCGACGTCACCTCGCTGTGGTCCGACGCCTACT TCATCACCGCTACCCGATAA
Upstream 100 bases:
>100_bases GACGTGCACGAAGCACTGCGCGCAGCGCGCTATCCGGCGTGATCTCAACAACGCGCGTATCGTTGCCTTAGGTAATTACT CCTAGGTAAGAGGCGGGCAC
Downstream 100 bases:
>100_bases CAGGCCTCGAGCTCACCCGTTATGAGCCTGCACGGTGCGGCTTGTTCTGCCGTGACTCAACCCGCGTAGGCCAGCACCTT CGCCATGATCAGGGCGACCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 299; Mature: 298
Protein sequence:
>299_residues MTRTDGDQWDIVSSVGFTALMVSSFRALETTRTEPLIRDEYARAFVEASGEPRLTEALAAGTPESEWDTATVYLVNHLAV RTKYFDEFFAAATGSGIQQVVILAAGLDSRVYRLPWPDGTVVYELDQPKVLEFKDHVLREEHAVPLAERREVAVDLRDDW IAALRTAGFDATKPTAWLAEGLLAYLPGAAQDALFENITAHSAPGSFLATEWRRRQATAGQWQDAVNKLKPEFIKDISIG SLIYDDERQDPIEWLREHGWQVDTANRLEQAAAYGRPAPSEHSDVTSLWSDAYFITATR
Sequences:
>Translated_299_residues MTRTDGDQWDIVSSVGFTALMVSSFRALETTRTEPLIRDEYARAFVEASGEPRLTEALAAGTPESEWDTATVYLVNHLAV RTKYFDEFFAAATGSGIQQVVILAAGLDSRVYRLPWPDGTVVYELDQPKVLEFKDHVLREEHAVPLAERREVAVDLRDDW IAALRTAGFDATKPTAWLAEGLLAYLPGAAQDALFENITAHSAPGSFLATEWRRRQATAGQWQDAVNKLKPEFIKDISIG SLIYDDERQDPIEWLREHGWQVDTANRLEQAAAYGRPAPSEHSDVTSLWSDAYFITATR >Mature_298_residues TRTDGDQWDIVSSVGFTALMVSSFRALETTRTEPLIRDEYARAFVEASGEPRLTEALAAGTPESEWDTATVYLVNHLAVR TKYFDEFFAAATGSGIQQVVILAAGLDSRVYRLPWPDGTVVYELDQPKVLEFKDHVLREEHAVPLAERREVAVDLRDDWI AALRTAGFDATKPTAWLAEGLLAYLPGAAQDALFENITAHSAPGSFLATEWRRRQATAGQWQDAVNKLKPEFIKDISIGS LIYDDERQDPIEWLREHGWQVDTANRLEQAAAYGRPAPSEHSDVTSLWSDAYFITATR
Specific function: Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0677 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y027_MYCA9 (B1ME65)
Other databases:
- EMBL: CU458896 - RefSeq: YP_001700783.1 - ProteinModelPortal: B1ME65 - SMR: B1ME65 - EnsemblBacteria: EBMYCT00000006134 - GeneID: 5962572 - GenomeReviews: CU458896_GR - KEGG: mab:MAB_0027c - GeneTree: EBGT00050000015698 - HOGENOM: HBG570783 - OMA: FENITAH - BioCyc: MABS561007:MAB_0027C-MONOMER - InterPro: IPR011610 - InterPro: IPR007213 - TIGRFAMs: TIGR00027
Pfam domain/function: PF04072 LCM
EC number: NA
Molecular weight: Translated: 33446; Mature: 33315
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: BINDING 126-126
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRTDGDQWDIVSSVGFTALMVSSFRALETTRTEPLIRDEYARAFVEASGEPRLTEALAA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHC GTPESEWDTATVYLVNHLAVRTKYFDEFFAAATGSGIQQVVILAAGLDSRVYRLPWPDGT CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHEECCCCCEEECCCCCCC VVYELDQPKVLEFKDHVLREEHAVPLAERREVAVDLRDDWIAALRTAGFDATKPTAWLAE EEEECCCCCCHHHHHHHHHHHHCCCHHHCCCEEEECHHHHHHHHHHCCCCCCCCHHHHHH GLLAYLPGAAQDALFENITAHSAPGSFLATEWRRRQATAGQWQDAVNKLKPEFIKDISIG HHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHCCCC SLIYDDERQDPIEWLREHGWQVDTANRLEQAAAYGRPAPSEHSDVTSLWSDAYFITATR CEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCEEEEECC >Mature Secondary Structure TRTDGDQWDIVSSVGFTALMVSSFRALETTRTEPLIRDEYARAFVEASGEPRLTEALAA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHC GTPESEWDTATVYLVNHLAVRTKYFDEFFAAATGSGIQQVVILAAGLDSRVYRLPWPDGT CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHEECCCCCEEECCCCCCC VVYELDQPKVLEFKDHVLREEHAVPLAERREVAVDLRDDWIAALRTAGFDATKPTAWLAE EEEECCCCCCHHHHHHHHHHHHCCCHHHCCCEEEECHHHHHHHHHHCCCCCCCCHHHHHH GLLAYLPGAAQDALFENITAHSAPGSFLATEWRRRQATAGQWQDAVNKLKPEFIKDISIG HHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHCCCC SLIYDDERQDPIEWLREHGWQVDTANRLEQAAAYGRPAPSEHSDVTSLWSDAYFITATR CEEECCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA