Definition Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence.
Accession NC_010397
Length 5,067,172

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The map label for this gene is 169627135

Identifier: 169627135

GI number: 169627135

Start: 27424

End: 27849

Strand: Reverse

Name: 169627135

Synonym: MAB_0028c

Alternate gene names: NA

Gene position: 27849-27424 (Counterclockwise)

Preceding gene: 169627136

Following gene: 169627134

Centisome position: 0.55

GC content: 67.14

Gene sequence:

>426_bases
GTGGATAACTCGACGCCGCCTCCCGTTGAATGGGGCCCGAAACCTGCCGGCATCCTCGCCGTGGCGCTCCTCGGCATCGC
CCTCGGTGTTGCCTCGGCGTTGTTTGTGACCGATGCACCGGGACGTCTGCTGGCCGCGCTGGCGGCTCTTGGTCTGCTGA
TCTTCGCGGCGGTGTCCTGGCGCTGCCGCCCGAAACTGCGTCTCGCCGACGACGGCCTGCAGATGCAGGGCTTGACCCGC
CACACGTTGCTGCCGCGCACTGCCGTCGATTCGGTAAAAGTCACCGAGTTCCGCCGTCTGGGACGGCGCACCCGGCTGTT
GGAGATCGAATCGGGGGACAGGCTGATCGTGCTGAACCGGTGGGATCTGGGTACCGATCCTCGCGACGTGCACGAAGCAC
TGCGCGCAGCGCGCTATCCGGCGTGA

Upstream 100 bases:

>100_bases
CAAGCGGCTCATCGATCTGGTTGGCACGCGTTTCCATCGAGTCCACCCATCAGACACCCAATCACAACGATGTGATTTAT
CCCCACTGTGGATAACGCCT

Downstream 100 bases:

>100_bases
TCTCAACAACGCGCGTATCGTTGCCTTAGGTAATTACTCCTAGGTAAGAGGCGGGCACATGACACGGACCGACGGCGATC
AATGGGACATTGTCAGCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MDNSTPPPVEWGPKPAGILAVALLGIALGVASALFVTDAPGRLLAALAALGLLIFAAVSWRCRPKLRLADDGLQMQGLTR
HTLLPRTAVDSVKVTEFRRLGRRTRLLEIESGDRLIVLNRWDLGTDPRDVHEALRAARYPA

Sequences:

>Translated_141_residues
MDNSTPPPVEWGPKPAGILAVALLGIALGVASALFVTDAPGRLLAALAALGLLIFAAVSWRCRPKLRLADDGLQMQGLTR
HTLLPRTAVDSVKVTEFRRLGRRTRLLEIESGDRLIVLNRWDLGTDPRDVHEALRAARYPA
>Mature_141_residues
MDNSTPPPVEWGPKPAGILAVALLGIALGVASALFVTDAPGRLLAALAALGLLIFAAVSWRCRPKLRLADDGLQMQGLTR
HTLLPRTAVDSVKVTEFRRLGRRTRLLEIESGDRLIVLNRWDLGTDPRDVHEALRAARYPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019692 [H]

Pfam domain/function: PF10756 DUF2581 [H]

EC number: NA

Molecular weight: Translated: 15337; Mature: 15337

Theoretical pI: Translated: 10.93; Mature: 10.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNSTPPPVEWGPKPAGILAVALLGIALGVASALFVTDAPGRLLAALAALGLLIFAAVSW
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
RCRPKLRLADDGLQMQGLTRHTLLPRTAVDSVKVTEFRRLGRRTRLLEIESGDRLIVLNR
CCCCCCEECCCCCCCCCCHHHHCCCCHHHCHHHHHHHHHHCCHHEEEEECCCCEEEEEEC
WDLGTDPRDVHEALRAARYPA
CCCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MDNSTPPPVEWGPKPAGILAVALLGIALGVASALFVTDAPGRLLAALAALGLLIFAAVSW
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
RCRPKLRLADDGLQMQGLTRHTLLPRTAVDSVKVTEFRRLGRRTRLLEIESGDRLIVLNR
CCCCCCEECCCCCCCCCCHHHHCCCCHHHCHHHHHHHHHHCCHHEEEEECCCCEEEEEEC
WDLGTDPRDVHEALRAARYPA
CCCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]