| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627119
Identifier: 169627119
GI number: 169627119
Start: 11717
End: 12328
Strand: Reverse
Name: 169627119
Synonym: MAB_0011c
Alternate gene names: NA
Gene position: 12328-11717 (Counterclockwise)
Preceding gene: 169627120
Following gene: 169627118
Centisome position: 0.24
GC content: 58.82
Gene sequence:
>612_bases GTGAAGATCTTCCATCACATCGCGCTCATGTCGGCGGTGGCACTCACCGTCGTTGGCTGTGGCGGCAATACCGTGTCTGG GGACGCGATTACTGCCACAAATACTGCGCGCGCCGGACACGATACTGCCACAAGTTCCTCACCTACTGTCACTAACACGC TCCCCGGACCGCACCCGCCCCCTAACCAAAATAGTGACGGCACTACCTTCGATCCCTGTTTGGCCTACAGTGCGGCGGAA TTGAGCAAATGGGGACTCGATCCCGCCACAGTTAAGGACATCGGCGCCACCACGACACTCCAGCGGGGTTGCAGCTGGCA GGGGGACGGCTGGTACGTCCAGCAACTCGTGATCAATCGCTCCATTTCAGAGTACTTGGATACCAATAACTATCCCGACG CCAAGCCCGTGGCTATCGCCGGACTGCAAGGCTCGACACATCGCTTGGGACAATCCGGAACTGCTTTCTGCTCAGCGCAG ATTCCGTCCCAACGCGCCGTCGTCGCCACCCTCGTCAGCCTTGACAGACCAAGCGCGCAGAAAGCGATCGGAGATGCCTG CACAAAAGCCATCGAGATCGCCACCGACACTGTCCCGAAGCTTCCGAAATAA
Upstream 100 bases:
>100_bases CCAAGATCGACCACGTGCTGGCTATGGAAGTTCTGTACAACAACATGGACGCCTACAACGCGGGCCGCGTCTTCGATCAC AAGCTGTCGGTCGAATACAA
Downstream 100 bases:
>100_bases CATGAGAGGTAACAACCATGTCCGGTGATGGCTGGGATGGCATGTCACATGCCGAGATCGTGGGCAAGCTTAGTCAGCTG AAGCCCGACAACGCCTTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MKIFHHIALMSAVALTVVGCGGNTVSGDAITATNTARAGHDTATSSSPTVTNTLPGPHPPPNQNSDGTTFDPCLAYSAAE LSKWGLDPATVKDIGATTTLQRGCSWQGDGWYVQQLVINRSISEYLDTNNYPDAKPVAIAGLQGSTHRLGQSGTAFCSAQ IPSQRAVVATLVSLDRPSAQKAIGDACTKAIEIATDTVPKLPK
Sequences:
>Translated_203_residues MKIFHHIALMSAVALTVVGCGGNTVSGDAITATNTARAGHDTATSSSPTVTNTLPGPHPPPNQNSDGTTFDPCLAYSAAE LSKWGLDPATVKDIGATTTLQRGCSWQGDGWYVQQLVINRSISEYLDTNNYPDAKPVAIAGLQGSTHRLGQSGTAFCSAQ IPSQRAVVATLVSLDRPSAQKAIGDACTKAIEIATDTVPKLPK >Mature_203_residues MKIFHHIALMSAVALTVVGCGGNTVSGDAITATNTARAGHDTATSSSPTVTNTLPGPHPPPNQNSDGTTFDPCLAYSAAE LSKWGLDPATVKDIGATTTLQRGCSWQGDGWYVQQLVINRSISEYLDTNNYPDAKPVAIAGLQGSTHRLGQSGTAFCSAQ IPSQRAVVATLVSLDRPSAQKAIGDACTKAIEIATDTVPKLPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21090; Mature: 21090
Theoretical pI: Translated: 7.01; Mature: 7.01
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIFHHIALMSAVALTVVGCGGNTVSGDAITATNTARAGHDTATSSSPTVTNTLPGPHPP CHHHHHHHHHHHHHHHEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEECCCCCCCCC PNQNSDGTTFDPCLAYSAAELSKWGLDPATVKDIGATTTLQRGCSWQGDGWYVQQLVINR CCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHH SISEYLDTNNYPDAKPVAIAGLQGSTHRLGQSGTAFCSAQIPSQRAVVATLVSLDRPSAQ HHHHHHCCCCCCCCCCEEEECCCCCHHHCCCCCCEEEEECCCCCHHHHHHHHHCCCCHHH KAIGDACTKAIEIATDTVPKLPK HHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKIFHHIALMSAVALTVVGCGGNTVSGDAITATNTARAGHDTATSSSPTVTNTLPGPHPP CHHHHHHHHHHHHHHHEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCEECCCCCCCCC PNQNSDGTTFDPCLAYSAAELSKWGLDPATVKDIGATTTLQRGCSWQGDGWYVQQLVINR CCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHH SISEYLDTNNYPDAKPVAIAGLQGSTHRLGQSGTAFCSAQIPSQRAVVATLVSLDRPSAQ HHHHHHCCCCCCCCCCEEEECCCCCHHHCCCCCCEEEEECCCCCHHHHHHHHHCCCCHHH KAIGDACTKAIEIATDTVPKLPK HHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA