| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627118
Identifier: 169627118
GI number: 169627118
Start: 10485
End: 11699
Strand: Reverse
Name: 169627118
Synonym: MAB_0010c
Alternate gene names: NA
Gene position: 11699-10485 (Counterclockwise)
Preceding gene: 169627119
Following gene: NA
Centisome position: 0.23
GC content: 66.42
Gene sequence:
>1215_bases ATGTCCGGTGATGGCTGGGATGGCATGTCACATGCCGAGATCGTGGGCAAGCTTAGTCAGCTGAAGCCCGACAACGCCTT TAATTTGGCCCAGTCATGGAGCGACATCTATTCCAAAGTGTCAGACTCCGCCGAACAGTACACTCGCGCCGCAAGCACCA TGGAGCGAATCTGGACCGGCGACGGACCGGATGCCGCCCGTCAATCACTTAAAGCCAAGTACCAGGAACTTCAGGCCGAT GACGGCATCGCGGCCAAGGCCGGGAAGCTGCAGAACGCTCTCACACAGGACGGTGCCTGCCTGACGAATGCGGGCCGCGT GCCGCAGATGTACCCGGTGCCTCCCGACAACACCGACAAGGATGCCAAACAGAAACTCCTGGAGGCTGTTCGGGCTGAGG CCGAACGTCTGTACACCGAGCCGCTCGACGTCACCCGTCCCAAGATTGACGACGCTGCTTCGGATAACTCCGGCTCCGGC GCTATCCAGCAGCCGGGTGGAGGCGGCGGCAGCGGTGGCGGGGGTGGCGGAAACTCCGCTGGCGGTGGCTCCGACAGCAA GCCGCAATCCCCAGGCGGCGGCACCGACGGCCTGGCAGACAAGAACACCAAGCCACAACTCGCCAATGGAGACGGACAAG GCGGGCAAGGGCAAGGGGCTGGCTCCGGATCCGGCAGCGGTGCTGGCGGCGGCCAAGGCGCCGGCTCGGGTTCGGGTGCA GGCGGTAGTTCACCGTTTGGCTCCGGATCCGGAACGGGCACAGGCGGTTCCGGCCTCCCGCTGGGGTCGACCACTGCGGC AGGCTACGGTCCATCCGGATCGGCTGGCGGCACCGGCCTCGCCTCGGGCACGGCCGGCGGTGCAAGCGCGTTGCGCGCCG GCGGAGGACTTCCGGGCGGGGCCACCAGCGGCGCAGGTGCCAACCCCGCTGCCATCGGCGCGGCCGGCGTGCGCGGGGGC GCCATGGGACCTATGGGCATGATGGGCGGCGCGGGCGCGCACGGCAAGGGCGGTCACGGCGAAGATGATGACGAGCATGA GACGCCGGCCATCCTGATCAATCTCGATAACACCTATGAGTTCATGGGTGACCTGCCCAAGGCGTCTCCGGCCGTCATCG GTGACTGGAGCGAGCAAGAGAAGGCCGACAAGCAGGCCCAGGAACGCGAGAAGCGGCGGTACAAGAAACTCGGCTGGGAC GTCGAATTCGAGTGA
Upstream 100 bases:
>100_bases CAAGCGCGCAGAAAGCGATCGGAGATGCCTGCACAAAAGCCATCGAGATCGCCACCGACACTGTCCCGAAGCTTCCGAAA TAACATGAGAGGTAACAACC
Downstream 100 bases:
>100_bases GAAGTAAAGCCTTTGGGTAACTAGCGCAGTCACCCAAAGGCTTTACTTCTACTTGGTCCAGCCCAGCTTCTTGTTCGCTT CCGCGAGCACCGGCGCAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 404; Mature: 403
Protein sequence:
>404_residues MSGDGWDGMSHAEIVGKLSQLKPDNAFNLAQSWSDIYSKVSDSAEQYTRAASTMERIWTGDGPDAARQSLKAKYQELQAD DGIAAKAGKLQNALTQDGACLTNAGRVPQMYPVPPDNTDKDAKQKLLEAVRAEAERLYTEPLDVTRPKIDDAASDNSGSG AIQQPGGGGGSGGGGGGNSAGGGSDSKPQSPGGGTDGLADKNTKPQLANGDGQGGQGQGAGSGSGSGAGGGQGAGSGSGA GGSSPFGSGSGTGTGGSGLPLGSTTAAGYGPSGSAGGTGLASGTAGGASALRAGGGLPGGATSGAGANPAAIGAAGVRGG AMGPMGMMGGAGAHGKGGHGEDDDEHETPAILINLDNTYEFMGDLPKASPAVIGDWSEQEKADKQAQEREKRRYKKLGWD VEFE
Sequences:
>Translated_404_residues MSGDGWDGMSHAEIVGKLSQLKPDNAFNLAQSWSDIYSKVSDSAEQYTRAASTMERIWTGDGPDAARQSLKAKYQELQAD DGIAAKAGKLQNALTQDGACLTNAGRVPQMYPVPPDNTDKDAKQKLLEAVRAEAERLYTEPLDVTRPKIDDAASDNSGSG AIQQPGGGGGSGGGGGGNSAGGGSDSKPQSPGGGTDGLADKNTKPQLANGDGQGGQGQGAGSGSGSGAGGGQGAGSGSGA GGSSPFGSGSGTGTGGSGLPLGSTTAAGYGPSGSAGGTGLASGTAGGASALRAGGGLPGGATSGAGANPAAIGAAGVRGG AMGPMGMMGGAGAHGKGGHGEDDDEHETPAILINLDNTYEFMGDLPKASPAVIGDWSEQEKADKQAQEREKRRYKKLGWD VEFE >Mature_403_residues SGDGWDGMSHAEIVGKLSQLKPDNAFNLAQSWSDIYSKVSDSAEQYTRAASTMERIWTGDGPDAARQSLKAKYQELQADD GIAAKAGKLQNALTQDGACLTNAGRVPQMYPVPPDNTDKDAKQKLLEAVRAEAERLYTEPLDVTRPKIDDAASDNSGSGA IQQPGGGGGSGGGGGGNSAGGGSDSKPQSPGGGTDGLADKNTKPQLANGDGQGGQGQGAGSGSGSGAGGGQGAGSGSGAG GSSPFGSGSGTGTGGSGLPLGSTTAAGYGPSGSAGGTGLASGTAGGASALRAGGGLPGGATSGAGANPAAIGAAGVRGGA MGPMGMMGGAGAHGKGGHGEDDDEHETPAILINLDNTYEFMGDLPKASPAVIGDWSEQEKADKQAQEREKRRYKKLGWDV EFE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39530; Mature: 39399
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGDGWDGMSHAEIVGKLSQLKPDNAFNLAQSWSDIYSKVSDSAEQYTRAASTMERIWTG CCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DGPDAARQSLKAKYQELQADDGIAAKAGKLQNALTQDGACLTNAGRVPQMYPVPPDNTDK CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEECCCCCCCEECCCCCCCCCH DAKQKLLEAVRAEAERLYTEPLDVTRPKIDDAASDNSGSGAIQQPGGGGGSGGGGGGNSA HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCC GGGSDSKPQSPGGGTDGLADKNTKPQLANGDGQGGQGQGAGSGSGSGAGGGQGAGSGSGA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GGSSPFGSGSGTGTGGSGLPLGSTTAAGYGPSGSAGGTGLASGTAGGASALRAGGGLPGG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCC ATSGAGANPAAIGAAGVRGGAMGPMGMMGGAGAHGKGGHGEDDDEHETPAILINLDNTYE CCCCCCCCCHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHH FMGDLPKASPAVIGDWSEQEKADKQAQEREKRRYKKLGWDVEFE HHHCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SGDGWDGMSHAEIVGKLSQLKPDNAFNLAQSWSDIYSKVSDSAEQYTRAASTMERIWTG CCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DGPDAARQSLKAKYQELQADDGIAAKAGKLQNALTQDGACLTNAGRVPQMYPVPPDNTDK CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEECCCCCCCEECCCCCCCCCH DAKQKLLEAVRAEAERLYTEPLDVTRPKIDDAASDNSGSGAIQQPGGGGGSGGGGGGNSA HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCC GGGSDSKPQSPGGGTDGLADKNTKPQLANGDGQGGQGQGAGSGSGSGAGGGQGAGSGSGA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GGSSPFGSGSGTGTGGSGLPLGSTTAAGYGPSGSAGGTGLASGTAGGASALRAGGGLPGG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCC ATSGAGANPAAIGAAGVRGGAMGPMGMMGGAGAHGKGGHGEDDDEHETPAILINLDNTYE CCCCCCCCCHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHH FMGDLPKASPAVIGDWSEQEKADKQAQEREKRRYKKLGWDVEFE HHHCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA