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The map label for this gene is tnpA [H]

Identifier: 169834467

GI number: 169834467

Start: 1316358

End: 1317605

Strand: Direct

Name: tnpA [H]

Synonym: SPH_1418

Alternate gene names: 169834467

Gene position: 1316358-1317605 (Clockwise)

Preceding gene: 169834110

Following gene: 169833712

Centisome position: 58.62

GC content: 35.58

Gene sequence:

>1248_bases
ATGTCCCATAATGATTCTATCCTAAATATTCTTGGAATTAAAGATAAAAATATTAAAATTATTTCTGTTGAAGAAGCTGA
ACACAACAACGATTCTGTTAAAGAGTATATAACGCTAATAACAGCTACTCTTTCTTATCCGATTAATCGTTGTCGTAACT
GTGGCTTTCCCACAGTTAATAAGGATGGCTTTCGCAAAACTCATGTACGACTGGCAAGTTTAAATGGGAGAAGATATGAA
CTAGAGCTTCGTAAACAACGCTATAAATGTAAATCATGCCATACTACTTTTGGTGCTATTACTAATTTAACCAAAGAAAA
TCAAACCTTATCCAGTGATCTCAAAAATCAAATCATGCTTTTAGCTCGTAAAGGCTTATCTGGTCAGCTTATTGCTGAAA
TGTGTCACTGCTCTCCTAGCAGTGTTCGTCGAACAATCTTAGAGCGCATGGAACCACACTATCGTGTGGCTAAGTTGCCT
AAGCATCTATGTTTTGACGAGTTTCGTTCAATTAAGTCTGTGATGTCCTTTATCTGTTGTGACGCTGAAACCCACCAAAT
TGTCACAAAGTTACAGGATCGTCTATCACCTACCATTGTTGATTATTTTGAAAGTCGTTATTCAAAAGCCGAACGCGAAT
GCGTTCAATCAGTTGTAATTGATTTAAATGCTCAATATCAAAGTTTTATCTATCGCCTTTTCCCTAATGCCAATATCATT
ATTGATCGCTTCCACCTTGTACAATTAGCTGGTCGCGCTTTGGACAATTGTCGTATCTCTATCCTAAAGCAACTTGATAA
ACAGAGCCAAGAATATAAAATTATGAAGTCACATTGGAAGCTATTCCATAAAAAAGCTGAAGATCTTCACCCTGAAGAAG
TAGTTTTTCTTCGCGGCGTTAAACAATATATGACTCGCCAAAATGCTGTTGATCTCATTACTAGTAAATTTTCCAAGTTC
GCTGAAGTATACCAAACTTACCAAGATATCACGAAAGCCCTAAACGAGCGCAATAGTGAATTACTAGAGTCAACCATCTT
AGACTACCAAAAAACCAATACAGAAATGGATACTGCTATTCAAACCCTTCGTCAAAACAGAAAATATGTCTTAAATAGCG
CTAAATTTGAATACTCTAATGGTCCTTTAGAAGGCATCAATCGCAAAATCAAAACCCTAAAACGAACTTGTTATGGTTTT
GCCAATCAAAAATTTTTCTTTTTAAGAATCGATTGTATTTTTTCGTAA

Upstream 100 bases:

>100_bases
AGATTCCATGCCAGATTTTTTTATACAAAAAAGAGGACATTTGCTGTCCCCTCGTTATACAATCAATTCACCACAAAAAT
CATGAAAGAAGGTTAAACAA

Downstream 100 bases:

>100_bases
AAAAATACCCCCTACATTTTCGTAGGAAGTATTTTTAGTCAACCATACCAGTTGACAGATATCCCACTTAGGACATTTTC
CTACAAGGGGTCCCGAGCGC

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 415; Mature: 414

Protein sequence:

>415_residues
MSHNDSILNILGIKDKNIKIISVEEAEHNNDSVKEYITLITATLSYPINRCRNCGFPTVNKDGFRKTHVRLASLNGRRYE
LELRKQRYKCKSCHTTFGAITNLTKENQTLSSDLKNQIMLLARKGLSGQLIAEMCHCSPSSVRRTILERMEPHYRVAKLP
KHLCFDEFRSIKSVMSFICCDAETHQIVTKLQDRLSPTIVDYFESRYSKAERECVQSVVIDLNAQYQSFIYRLFPNANII
IDRFHLVQLAGRALDNCRISILKQLDKQSQEYKIMKSHWKLFHKKAEDLHPEEVVFLRGVKQYMTRQNAVDLITSKFSKF
AEVYQTYQDITKALNERNSELLESTILDYQKTNTEMDTAIQTLRQNRKYVLNSAKFEYSNGPLEGINRKIKTLKRTCYGF
ANQKFFFLRIDCIFS

Sequences:

>Translated_415_residues
MSHNDSILNILGIKDKNIKIISVEEAEHNNDSVKEYITLITATLSYPINRCRNCGFPTVNKDGFRKTHVRLASLNGRRYE
LELRKQRYKCKSCHTTFGAITNLTKENQTLSSDLKNQIMLLARKGLSGQLIAEMCHCSPSSVRRTILERMEPHYRVAKLP
KHLCFDEFRSIKSVMSFICCDAETHQIVTKLQDRLSPTIVDYFESRYSKAERECVQSVVIDLNAQYQSFIYRLFPNANII
IDRFHLVQLAGRALDNCRISILKQLDKQSQEYKIMKSHWKLFHKKAEDLHPEEVVFLRGVKQYMTRQNAVDLITSKFSKF
AEVYQTYQDITKALNERNSELLESTILDYQKTNTEMDTAIQTLRQNRKYVLNSAKFEYSNGPLEGINRKIKTLKRTCYGF
ANQKFFFLRIDCIFS
>Mature_414_residues
SHNDSILNILGIKDKNIKIISVEEAEHNNDSVKEYITLITATLSYPINRCRNCGFPTVNKDGFRKTHVRLASLNGRRYEL
ELRKQRYKCKSCHTTFGAITNLTKENQTLSSDLKNQIMLLARKGLSGQLIAEMCHCSPSSVRRTILERMEPHYRVAKLPK
HLCFDEFRSIKSVMSFICCDAETHQIVTKLQDRLSPTIVDYFESRYSKAERECVQSVVIDLNAQYQSFIYRLFPNANIII
DRFHLVQLAGRALDNCRISILKQLDKQSQEYKIMKSHWKLFHKKAEDLHPEEVVFLRGVKQYMTRQNAVDLITSKFSKFA
EVYQTYQDITKALNERNSELLESTILDYQKTNTEMDTAIQTLRQNRKYVLNSAKFEYSNGPLEGINRKIKTLKRTCYGFA
NQKFFFLRIDCIFS

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3464

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 12 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002560 [H]

Pfam domain/function: PF01610 Transposase_12 [H]

EC number: NA

Molecular weight: Translated: 48412; Mature: 48281

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHNDSILNILGIKDKNIKIISVEEAEHNNDSVKEYITLITATLSYPINRCRNCGFPTVN
CCCCCCEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
KDGFRKTHVRLASLNGRRYELELRKQRYKCKSCHTTFGAITNLTKENQTLSSDLKNQIML
CCCCHHHHHEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LARKGLSGQLIAEMCHCSPSSVRRTILERMEPHYRVAKLPKHLCFDEFRSIKSVMSFICC
HHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
DAETHQIVTKLQDRLSPTIVDYFESRYSKAERECVQSVVIDLNAQYQSFIYRLFPNANII
CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEE
IDRFHLVQLAGRALDNCRISILKQLDKQSQEYKIMKSHWKLFHKKAEDLHPEEVVFLRGV
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
KQYMTRQNAVDLITSKFSKFAEVYQTYQDITKALNERNSELLESTILDYQKTNTEMDTAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
QTLRQNRKYVLNSAKFEYSNGPLEGINRKIKTLKRTCYGFANQKFFFLRIDCIFS
HHHHHCCHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECC
>Mature Secondary Structure 
SHNDSILNILGIKDKNIKIISVEEAEHNNDSVKEYITLITATLSYPINRCRNCGFPTVN
CCCCCEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
KDGFRKTHVRLASLNGRRYELELRKQRYKCKSCHTTFGAITNLTKENQTLSSDLKNQIML
CCCCHHHHHEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
LARKGLSGQLIAEMCHCSPSSVRRTILERMEPHYRVAKLPKHLCFDEFRSIKSVMSFICC
HHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
DAETHQIVTKLQDRLSPTIVDYFESRYSKAERECVQSVVIDLNAQYQSFIYRLFPNANII
CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEE
IDRFHLVQLAGRALDNCRISILKQLDKQSQEYKIMKSHWKLFHKKAEDLHPEEVVFLRGV
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
KQYMTRQNAVDLITSKFSKFAEVYQTYQDITKALNERNSELLESTILDYQKTNTEMDTAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
QTLRQNRKYVLNSAKFEYSNGPLEGINRKIKTLKRTCYGFANQKFFFLRIDCIFS
HHHHHCCHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8093238 [H]