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The map label for this gene is ycbL [C]

Identifier: 169834426

GI number: 169834426

Start: 1615470

End: 1616099

Strand: Direct

Name: ycbL [C]

Synonym: SPH_1755

Alternate gene names: 169834426

Gene position: 1615470-1616099 (Clockwise)

Preceding gene: 169833826

Following gene: 169833206

Centisome position: 71.94

GC content: 48.1

Gene sequence:

>630_bases
ATGAAAATCCATAAAACCGTGAATCCTGTTGCCTATGAAAATACCTATTATCTAGAAGGCGAAAAGCACCTCATCGTCGT
CGATCCTGGTAGTCATTGGGAAGCCATTCGTCAGACAATCGAGAAGATCAACAAACCGATCTGTGCTATTCTCTTGACCC
ACGCCCATTATGACCATATCATGAGTCTGGACTTGGTTCGCGAGACGTTTGGCAATCCTCCTGTCTATATCGCAGAGAGC
GAAGCCAGCTGGCTCTACACTCCTGTCGATAATCTCTCCGGTCTCCCTCGCCACGATGATATGGCAGATGTGGTCACAAA
ACCTGCAGAACACACCTTTGTCTTTCACGAAGAATACCAACTAGAGGAATTTCGTTTTAAGGTTCTACCGACCCCAGGGC
ACTCTATCGGTGGTGTTTCCCTAGTCTTTCCTGATGCTCACCTAGTCTTGACGGGAGATGCTCTATTCCGCGAAACTATC
GGACGGACCGACCTTCCGACTGGTAGCATGGAGCAACTCCTTCATAGTATCCAGACCCAACTCTTCACCCTACCAAACTA
CGATGTCTATCCAGGACATGGTCCAGCTACTACTATCGCTCACGAAAAGGCCTTCAATCCCTTTTTCTAG

Upstream 100 bases:

>100_bases
CAGGCTGTTCAAAGCACTGCTTTGAGGTTGCAGATAAAGTTGACGCGGTTTGAAGAGATTTTCGAAGAGTATTAGTACAT
TCTTTGAGATTGGAGCTAGT

Downstream 100 bases:

>100_bases
CAAGATGATGACAATCGAAATTTAAGTAAACTATCCAGCAAATCTTTCTATTACAAAAGGCATCCTATCAAGGTTTTCAC
ACGTGATTGGATGCCTTTTT

Product: metallo-beta-lactamase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MKIHKTVNPVAYENTYYLEGEKHLIVVDPGSHWEAIRQTIEKINKPICAILLTHAHYDHIMSLDLVRETFGNPPVYIAES
EASWLYTPVDNLSGLPRHDDMADVVTKPAEHTFVFHEEYQLEEFRFKVLPTPGHSIGGVSLVFPDAHLVLTGDALFRETI
GRTDLPTGSMEQLLHSIQTQLFTLPNYDVYPGHGPATTIAHEKAFNPFF

Sequences:

>Translated_209_residues
MKIHKTVNPVAYENTYYLEGEKHLIVVDPGSHWEAIRQTIEKINKPICAILLTHAHYDHIMSLDLVRETFGNPPVYIAES
EASWLYTPVDNLSGLPRHDDMADVVTKPAEHTFVFHEEYQLEEFRFKVLPTPGHSIGGVSLVFPDAHLVLTGDALFRETI
GRTDLPTGSMEQLLHSIQTQLFTLPNYDVYPGHGPATTIAHEKAFNPFF
>Mature_209_residues
MKIHKTVNPVAYENTYYLEGEKHLIVVDPGSHWEAIRQTIEKINKPICAILLTHAHYDHIMSLDLVRETFGNPPVYIAES
EASWLYTPVDNLSGLPRHDDMADVVTKPAEHTFVFHEEYQLEEFRFKVLPTPGHSIGGVSLVFPDAHLVLTGDALFRETI
GRTDLPTGSMEQLLHSIQTQLFTLPNYDVYPGHGPATTIAHEKAFNPFF

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787158, Length=197, Percent_Identity=29.9492385786802, Blast_Score=93, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 23646; Mature: 23646

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIHKTVNPVAYENTYYLEGEKHLIVVDPGSHWEAIRQTIEKINKPICAILLTHAHYDHI
CCCCCCCCCEEECCEEEECCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHH
MSLDLVRETFGNPPVYIAESEASWLYTPVDNLSGLPRHDDMADVVTKPAEHTFVFHEEYQ
HHHHHHHHHHCCCCEEEEECCCCEEEECHHHCCCCCCCCCHHHHHCCCCCCEEEEECCCC
LEEFRFKVLPTPGHSIGGVSLVFPDAHLVLTGDALFRETIGRTDLPTGSMEQLLHSIQTQ
EEEEEEEEECCCCCCCCCEEEEECCCEEEEECHHHHHHHCCCCCCCCCHHHHHHHHHHHH
LFTLPNYDVYPGHGPATTIAHEKAFNPFF
EEECCCCCCCCCCCCCHHHHHHCCCCCCC
>Mature Secondary Structure
MKIHKTVNPVAYENTYYLEGEKHLIVVDPGSHWEAIRQTIEKINKPICAILLTHAHYDHI
CCCCCCCCCEEECCEEEECCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEHHHHHHHHHH
MSLDLVRETFGNPPVYIAESEASWLYTPVDNLSGLPRHDDMADVVTKPAEHTFVFHEEYQ
HHHHHHHHHHCCCCEEEEECCCCEEEECHHHCCCCCCCCCHHHHHCCCCCCEEEEECCCC
LEEFRFKVLPTPGHSIGGVSLVFPDAHLVLTGDALFRETIGRTDLPTGSMEQLLHSIQTQ
EEEEEEEEECCCCCCCCCEEEEECCCEEEEECHHHHHHHCCCCCCCCCHHHHHHHHHHHH
LFTLPNYDVYPGHGPATTIAHEKAFNPFF
EEECCCCCCCCCCCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA