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The map label for this gene is coiA [H]

Identifier: 169834084

GI number: 169834084

Start: 994813

End: 995766

Strand: Direct

Name: coiA [H]

Synonym: SPH_1079

Alternate gene names: 169834084

Gene position: 994813-995766 (Clockwise)

Preceding gene: 169833107

Following gene: 169833338

Centisome position: 44.3

GC content: 38.57

Gene sequence:

>954_bases
ATGTTTGTTGCGAGAGATGCTAGGGGAGAATTGGTAAATGTGTTAGAGGATAAACTTGAGAAGCAAGCATACACCTGCCC
AGCTTGTGGAGGCCAGCTCCATTTGCGTCAAGGACCAAGTGTACGGACGCATTTTGCCCATAAATCTTTAAAAGACTGTG
ATTTTTTCTTTGAAAATGAAAGTCCAGAACACCTGGCCAATAAGGAATCCCTCTATCACTGGTTGAAAAAAGAGACAAAG
GTTCAATTAGAGTACCCGCTTTCAGAACTTAAACAGATTGCGGATGTATTTGTAAATGGCAATCTAGCTCTAGAAGTTCA
GTGTAGTCCCTTGCCTCAGAAAGTCCTTAAAGAGCGAAGTGAGGGCTATCGTAGTCAGGGTTACCAAGTACTGTGGTTGC
TGGGTCAAAAACTGTGGCTCAAGGAGCGTTTGACTCGTCTACAGCAAGGTTTTCTTTATTTCAGTCAAAACATGGGCTTT
TATGTTTGGGAATTAGACAAGGAAAAACAAGTTTTAAGACTCAAATACCTGATTTACCAGGATCTCCGCGGTAAACTCCA
TTATCAAATCAAGGAATTTTCCTATGGTCAAGGTAGTTTATTGGAAATATTGCGTCTTCCCTATAAGAGACAAAAAATAT
CTCATTTTACAGTTTCTGAGGACAAGGACATCTGTCGCTATATCCGGCAACAACTTTATTATCAAAATCTCTTTTGGATG
AAAGAACAAGCAGAAGCCTATCAAAAGGGAGAAAATATCCTGACTTATGGACTGAAAGAATGGTATCCACAAATTCGACC
AATAGTGGGCAAATTTTTCCAGATTGAACAAGACTTGACTAGCTATTATCAGTACTTTTATACCTATTACCAAAAAAATC
CTCAAAATGATTGGCAAAAGCTTTATCCACCAGCCTTTTATCAGCAATATTTCTTGAAAAATATGGTAGAATAA

Upstream 100 bases:

>100_bases
GACCTTACTAGCTAAGAAAATCAAGTAAACACACATGAAGATTAGGAATTTTCCTGATCTTTTTTCTTTTTTACGAATGA
TATAGAAAAGGAGGGAATTC

Downstream 100 bases:

>100_bases
AAAGGATGGAGGAATCTAATGGTATTACAAAGAAATGAAATAAATGAAAAAGATACATGGGATCTATCAACGATCTACCC
AACTGACCAGGCTTGGGAAG

Product: competence protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MFVARDARGELVNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENESPEHLANKESLYHWLKKETK
VQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERSEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGF
YVWELDKEKQVLRLKYLIYQDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM
KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYQYFYTYYQKNPQNDWQKLYPPAFYQQYFLKNMVE

Sequences:

>Translated_317_residues
MFVARDARGELVNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENESPEHLANKESLYHWLKKETK
VQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERSEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGF
YVWELDKEKQVLRLKYLIYQDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM
KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYQYFYTYYQKNPQNDWQKLYPPAFYQQYFLKNMVE
>Mature_317_residues
MFVARDARGELVNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENESPEHLANKESLYHWLKKETK
VQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERSEGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGF
YVWELDKEKQVLRLKYLIYQDLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM
KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYQYFYTYYQKNPQNDWQKLYPPAFYQQYFLKNMVE

Specific function: Required for optimal transformation [H]

COG id: COG4469

COG function: function code R; Competence protein

Gene ontology:

Cell location: Cytoplasm (Probable). Note=Localizes at the cell poles of most competence-expressing cells [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010330
- InterPro:   IPR021176 [H]

Pfam domain/function: PF06054 CoiA [H]

EC number: NA

Molecular weight: Translated: 38270; Mature: 38270

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFVARDARGELVNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENE
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHCCHHHHHHHCCCC
SPEHLANKESLYHWLKKETKVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERS
CHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHH
EGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGFYVWELDKEKQVLRLKYLIYQ
CCHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEECCHHHHHHHHHHHHH
DLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM
HHCCHHEEEEECCCCCCCHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYQYFYTYYQKNPQNDWQK
HHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
LYPPAFYQQYFLKNMVE
HCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MFVARDARGELVNVLEDKLEKQAYTCPACGGQLHLRQGPSVRTHFAHKSLKDCDFFFENE
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHCCHHHHHHHCCCC
SPEHLANKESLYHWLKKETKVQLEYPLSELKQIADVFVNGNLALEVQCSPLPQKVLKERS
CHHHHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHH
EGYRSQGYQVLWLLGQKLWLKERLTRLQQGFLYFSQNMGFYVWELDKEKQVLRLKYLIYQ
CCHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEECCHHHHHHHHHHHHH
DLRGKLHYQIKEFSYGQGSLLEILRLPYKRQKISHFTVSEDKDICRYIRQQLYYQNLFWM
HHCCHHEEEEECCCCCCCHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
KEQAEAYQKGENILTYGLKEWYPQIRPIVGKFFQIEQDLTSYYQYFYTYYQKNPQNDWQK
HHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
LYPPAFYQQYFLKNMVE
HCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]