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The map label for this gene is pepS [H]

Identifier: 169833618

GI number: 169833618

Start: 346362

End: 347603

Strand: Direct

Name: pepS [H]

Synonym: SPH_0394

Alternate gene names: 169833618

Gene position: 346362-347603 (Clockwise)

Preceding gene: 169833256

Following gene: 169832770

Centisome position: 15.42

GC content: 46.22

Gene sequence:

>1242_bases
ATGGTTTTACCAAATTTTAAAGAAAATCTAGAAAAATATGCGAAATTGTTGGTTGCGAACGGAATTAACGTGCAACCTGG
TCACACTTTGGCTCTCTCTATTGATGTGGAGCAACGTGAATTGGCACATCTAATCGTGAAAGAAGCTTATGTCTTGGGTG
CGCATGAGGTCATCGTTCAGTGGACAGATGATGTGATTAACCGTGAGAAATTCCTCCATGCCCCGATGGAGCGTTTGGAC
AATGTGCCAGAATACAAGATTGCTGAGATGAACTATCTTTTGGAGAACAAGGCTAGCCGTCTTGGGGTTCGTTCATCTGA
TCCAGGTGCCTTGAACGGAGTGGACGCTGACAAGCTTTCAGCTTCTGCTAAAGCTATGGGACTTGCCATGAAGCCAATGC
GAATCGCAACTCAATCCAACAAGGTTAGCTGGACTGTAGCAGCCGCTGCTGGACTTGAGTGGGCTAAGAAAGTCTTCCCA
AATGCTGCGAGCGACGAAGAAGCAGTTGATTTCCTTTGGGATCAAATCTTCAAAACTTGTCGTGTCTACGAAGCAGATCC
TGTTAAGGCTTGGGAGGAACATGCAGCCATTCTCAAGAGCAAGGCCGATATGCTTAATAAGGAGCAATTTTCAGCCCTTC
ACTACACAGCGCCAGGAACAGATTTAACACTTGGTTTGCCAAAGAACCACGTTTGGGAATCAGCTGGTGCTGTCAATGCA
CAGGGCGAAGAATTCTTGCCAAATATGCCGACAGAAGAGGTCTTCACAGCGCCTGACTTCCGTCGTGCAGATGGTTATGT
CACTTCTACAAAACCGCTTAGCTACAACGGAAATATCATTGAAGGCATTAAGGTGACCTTTAAGGATGGACAAATCGTAG
ATATCACTGCTGAGAAGGGTGATCAGGTTATGAAAGACCTTGTCTTTGAAAATGCGGGTGCGCGTGCCTTGGGTGAATGT
GCCTTGGTACCAGATCCAAGTCCAATTTCTCAGTCAGGCATTATCTTCTTTAACACCCTTTTCGATGAAAATGCGTCAAA
CCACTTGGCTATCGGTGCAGCCTATGCGACTAGCGTTGTTGATGGAGCGGAGATGAGCGAAGAGGAGCTTGAAGCTGCAG
GGCTTAACCGTTCAGATGTTCACGTAGACTTTATGATTGGTTCTAACCAAATGGATATCGATGGTATTCGTGAGGATGGA
ACGCGGGTACCTCTTTTCCGTAATGGGAATTGGGCAAATTAG

Upstream 100 bases:

>100_bases
TACAATTCTTCTATCGACAGCACTCTTGTCAGGTGCTATTGCTTTAGCAGGAATCTTTTCTGCTTTGAAAGAAAAATAAA
AATAGAAAAGAGAAAACAGA

Downstream 100 bases:

>100_bases
CAAAAATATCCCAAAAGCAAATTGAATTGTAAGTATGCTTTTGGGATATTTATTTATAAGATTTTATTAGATTTTGAACG
ATTACATTTCCAACAGAGAG

Product: aminopeptidase PepS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 413; Mature: 413

Protein sequence:

>413_residues
MVLPNFKENLEKYAKLLVANGINVQPGHTLALSIDVEQRELAHLIVKEAYVLGAHEVIVQWTDDVINREKFLHAPMERLD
NVPEYKIAEMNYLLENKASRLGVRSSDPGALNGVDADKLSASAKAMGLAMKPMRIATQSNKVSWTVAAAAGLEWAKKVFP
NAASDEEAVDFLWDQIFKTCRVYEADPVKAWEEHAAILKSKADMLNKEQFSALHYTAPGTDLTLGLPKNHVWESAGAVNA
QGEEFLPNMPTEEVFTAPDFRRADGYVTSTKPLSYNGNIIEGIKVTFKDGQIVDITAEKGDQVMKDLVFENAGARALGEC
ALVPDPSPISQSGIIFFNTLFDENASNHLAIGAAYATSVVDGAEMSEEELEAAGLNRSDVHVDFMIGSNQMDIDGIREDG
TRVPLFRNGNWAN

Sequences:

>Translated_413_residues
MVLPNFKENLEKYAKLLVANGINVQPGHTLALSIDVEQRELAHLIVKEAYVLGAHEVIVQWTDDVINREKFLHAPMERLD
NVPEYKIAEMNYLLENKASRLGVRSSDPGALNGVDADKLSASAKAMGLAMKPMRIATQSNKVSWTVAAAAGLEWAKKVFP
NAASDEEAVDFLWDQIFKTCRVYEADPVKAWEEHAAILKSKADMLNKEQFSALHYTAPGTDLTLGLPKNHVWESAGAVNA
QGEEFLPNMPTEEVFTAPDFRRADGYVTSTKPLSYNGNIIEGIKVTFKDGQIVDITAEKGDQVMKDLVFENAGARALGEC
ALVPDPSPISQSGIIFFNTLFDENASNHLAIGAAYATSVVDGAEMSEEELEAAGLNRSDVHVDFMIGSNQMDIDGIREDG
TRVPLFRNGNWAN
>Mature_413_residues
MVLPNFKENLEKYAKLLVANGINVQPGHTLALSIDVEQRELAHLIVKEAYVLGAHEVIVQWTDDVINREKFLHAPMERLD
NVPEYKIAEMNYLLENKASRLGVRSSDPGALNGVDADKLSASAKAMGLAMKPMRIATQSNKVSWTVAAAAGLEWAKKVFP
NAASDEEAVDFLWDQIFKTCRVYEADPVKAWEEHAAILKSKADMLNKEQFSALHYTAPGTDLTLGLPKNHVWESAGAVNA
QGEEFLPNMPTEEVFTAPDFRRADGYVTSTKPLSYNGNIIEGIKVTFKDGQIVDITAEKGDQVMKDLVFENAGARALGEC
ALVPDPSPISQSGIIFFNTLFDENASNHLAIGAAYATSVVDGAEMSEEELEAAGLNRSDVHVDFMIGSNQMDIDGIREDG
TRVPLFRNGNWAN

Specific function: Exhibits a high specificity towards peptides possessing arginine or aromatic amino acids at the N-terminus. Could be involved both in bacterial growth by supplying amino acids [H]

COG id: COG2309

COG function: function code E; Leucyl aminopeptidase (aminopeptidase T)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M29 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000787 [H]

Pfam domain/function: PF02073 Peptidase_M29 [H]

EC number: NA

Molecular weight: Translated: 45283; Mature: 45283

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLPNFKENLEKYAKLLVANGINVQPGHTLALSIDVEQRELAHLIVKEAYVLGAHEVIVQ
CCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHCCHHHEEEE
WTDDVINREKFLHAPMERLDNVPEYKIAEMNYLLENKASRLGVRSSDPGALNGVDADKLS
EHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH
ASAKAMGLAMKPMRIATQSNKVSWTVAAAAGLEWAKKVFPNAASDEEAVDFLWDQIFKTC
HHHHHHCEEECCEEEEECCCCEEEEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
RVYEADPVKAWEEHAAILKSKADMLNKEQFSALHYTAPGTDLTLGLPKNHVWESAGAVNA
CCCCCCCHHHHHHHHHHHHHHHHHHCHHHHCEEEEECCCCEEEEECCCCHHHCCCCCCCC
QGEEFLPNMPTEEVFTAPDFRRADGYVTSTKPLSYNGNIIEGIKVTFKDGQIVDITAEKG
CCHHHCCCCCHHHHCCCCCCCCCCCEEECCCCCCCCCCEEEEEEEEEECCEEEEEECCCH
DQVMKDLVFENAGARALGECALVPDPSPISQSGIIFFNTLFDENASNHLAIGAAYATSVV
HHHHHHHHHCCCCCCHHCCEEECCCCCCCCCCCEEEEEEEECCCCCCEEEEEHHHHHHHH
DGAEMSEEELEAAGLNRSDVHVDFMIGSNQMDIDGIREDGTRVPLFRNGNWAN
CCCCCCHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCC
>Mature Secondary Structure
MVLPNFKENLEKYAKLLVANGINVQPGHTLALSIDVEQRELAHLIVKEAYVLGAHEVIVQ
CCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHCCHHHEEEE
WTDDVINREKFLHAPMERLDNVPEYKIAEMNYLLENKASRLGVRSSDPGALNGVDADKLS
EHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH
ASAKAMGLAMKPMRIATQSNKVSWTVAAAAGLEWAKKVFPNAASDEEAVDFLWDQIFKTC
HHHHHHCEEECCEEEEECCCCEEEEEEEHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH
RVYEADPVKAWEEHAAILKSKADMLNKEQFSALHYTAPGTDLTLGLPKNHVWESAGAVNA
CCCCCCCHHHHHHHHHHHHHHHHHHCHHHHCEEEEECCCCEEEEECCCCHHHCCCCCCCC
QGEEFLPNMPTEEVFTAPDFRRADGYVTSTKPLSYNGNIIEGIKVTFKDGQIVDITAEKG
CCHHHCCCCCHHHHCCCCCCCCCCCEEECCCCCCCCCCEEEEEEEEEECCEEEEEECCCH
DQVMKDLVFENAGARALGECALVPDPSPISQSGIIFFNTLFDENASNHLAIGAAYATSVV
HHHHHHHHHCCCCCCHHCCEEECCCCCCCCCCCEEEEEEEECCCCCCEEEEEHHHHHHHH
DGAEMSEEELEAAGLNRSDVHVDFMIGSNQMDIDGIREDGTRVPLFRNGNWAN
CCCCCCHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10406960 [H]