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The map label for this gene is pppA [C]

Identifier: 169833397

GI number: 169833397

Start: 1795237

End: 1795896

Strand: Direct

Name: pppA [C]

Synonym: SPH_1933

Alternate gene names: 169833397

Gene position: 1795237-1795896 (Clockwise)

Preceding gene: 169833686

Following gene: 169833563

Centisome position: 79.94

GC content: 45.0

Gene sequence:

>660_bases
ATGATTGATTTTTATTTTTTTCTCGTCGGGAGCATTCTCGCTTCCTTTCTTGGTTTGGTCATTGACCGTTTTCCAGAGCA
ATCCATTATCAGTTCAGTCAGTCACTGCGATTCCTGTCAGACTCGCTTGCGTCCCTTAGATTTGATTCCGATTCTCTCAC
AGGTCTTCAATCGCTTTTGCTGTCGCTACTGCAAGGTCCGCTATCCTGTCTGGTATGCCCTCTTTGAACTAGGCTTAGGA
CTCCTCTTTCTGCTTTACTCTTGGGAGTTGCTTTCCTTGGGGCAAGTCGTCCTAATCACCGCTGGTTTGACCTTGGGTAT
CTACGACTTTCACCATCAGGAATATCCCTTACTGGTCTGGATGACTTTCCACCTAATCCTAATAGCTTCCTCTGGCTGGA
ATCTGGTCATGGTCTCCTTCCTCATACTTGGAATTTTGGCTCATTTTATCGATATCCGCATGGGTGCAGGGGATTTCCTT
TTTTTAGCTTCTTGTGCTCTCGTCTTTAGCGTAACGGAGTTACTGATCTTGATTCAGTTCGCTTCTGCGACGGGTATCCT
GGCCTTTCTCCTGCAAAAGAAAAAGGAAAGACTTCCTTTCGTGCCTTTCCTCTTACTTGCTACTTGTTTGATTATTTTTG
GTAAGCTACTGCTTGTTTGA

Upstream 100 bases:

>100_bases
TACTCACCTTTTCTTCAAAACGAATTGTCATCTTTTCCTCACCATCTTATCTATGTTTCTCCATTATACTATTTCTCCCA
TTTTTTACGAATAGATAAGT

Downstream 100 bases:

>100_bases
TAAAGTCCTGAATCGGCTCTCCTTGGTGGAGAGCTTTTACTATTTTCGAACCGACGATAACACCATCTGACACCGCATTG
AAGCGTTCCAGATCGGCTTG

Product: type 4 prepilin peptidase

Products: NA

Alternate protein names: Signal Peptidase Type IV; Type 4 Prepilin Peptidase; Type IV Leader Peptidase Family Protein; Peptidase; Type IV Prepilin Peptidase-Related Protein; Type 4 Prepilin-Like Protein Specific Leader Peptidase; Aspartic Endopeptidase; Type II Secretory Pathway Prepilin Signal Peptidase; Type 4 Prepilin-Like Proteins Leader Peptide Processing; Prepilin Peptidase; Prepilin Peptidase Type IV; Type Iv Prepilin Peptidase

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MIDFYFFLVGSILASFLGLVIDRFPEQSIISSVSHCDSCQTRLRPLDLIPILSQVFNRFCCRYCKVRYPVWYALFELGLG
LLFLLYSWELLSLGQVVLITAGLTLGIYDFHHQEYPLLVWMTFHLILIASSGWNLVMVSFLILGILAHFIDIRMGAGDFL
FLASCALVFSVTELLILIQFASATGILAFLLQKKKERLPFVPFLLLATCLIIFGKLLLV

Sequences:

>Translated_219_residues
MIDFYFFLVGSILASFLGLVIDRFPEQSIISSVSHCDSCQTRLRPLDLIPILSQVFNRFCCRYCKVRYPVWYALFELGLG
LLFLLYSWELLSLGQVVLITAGLTLGIYDFHHQEYPLLVWMTFHLILIASSGWNLVMVSFLILGILAHFIDIRMGAGDFL
FLASCALVFSVTELLILIQFASATGILAFLLQKKKERLPFVPFLLLATCLIIFGKLLLV
>Mature_219_residues
MIDFYFFLVGSILASFLGLVIDRFPEQSIISSVSHCDSCQTRLRPLDLIPILSQVFNRFCCRYCKVRYPVWYALFELGLG
LLFLLYSWELLSLGQVVLITAGLTLGIYDFHHQEYPLLVWMTFHLILIASSGWNLVMVSFLILGILAHFIDIRMGAGDFL
FLASCALVFSVTELLILIQFASATGILAFLLQKKKERLPFVPFLLLATCLIIFGKLLLV

Specific function: Unknown

COG id: COG1989

COG function: function code NOU; Type II secretory pathway, prepilin signal peptidase PulO and related peptidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.4.23.43; 2.1.1.-

Molecular weight: Translated: 24855; Mature: 24855

Theoretical pI: Translated: 7.39; Mature: 7.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDFYFFLVGSILASFLGLVIDRFPEQSIISSVSHCDSCQTRLRPLDLIPILSQVFNRFC
CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
CRYCKVRYPVWYALFELGLGLLFLLYSWELLSLGQVVLITAGLTLGIYDFHHQEYPLLVW
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHH
MTFHLILIASSGWNLVMVSFLILGILAHFIDIRMGAGDFLFLASCALVFSVTELLILIQF
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
ASATGILAFLLQKKKERLPFVPFLLLATCLIIFGKLLLV
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MIDFYFFLVGSILASFLGLVIDRFPEQSIISSVSHCDSCQTRLRPLDLIPILSQVFNRFC
CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
CRYCKVRYPVWYALFELGLGLLFLLYSWELLSLGQVVLITAGLTLGIYDFHHQEYPLLVW
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHH
MTFHLILIASSGWNLVMVSFLILGILAHFIDIRMGAGDFLFLASCALVFSVTELLILIQF
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
ASATGILAFLLQKKKERLPFVPFLLLATCLIIFGKLLLV
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA