| Definition | Streptococcus pneumoniae Hungary19A-6, complete genome. |
|---|---|
| Accession | NC_010380 |
| Length | 2,245,615 |
Click here to switch to the map view.
The map label for this gene is 169832941
Identifier: 169832941
GI number: 169832941
Start: 2082699
End: 2083124
Strand: Direct
Name: 169832941
Synonym: SPH_2276
Alternate gene names: NA
Gene position: 2082699-2083124 (Clockwise)
Preceding gene: 169833400
Following gene: 169834303
Centisome position: 92.75
GC content: 38.5
Gene sequence:
>426_bases TTGACCAATTTAAGCAGTGTAGATAGTGAGGAGCTGTTTCAATTCTATCGTGAACAAAGGAATGCTGAAAACTTTATCAA AGAAAGGAAAGCAGGATTCTTTGGGGATAAGACAGATAGTTCGACCATGATTAAGAATGAAGTACGTATGATGATGGGCT GTCTGGCTTATAATCTCTACCTCTTTTTAAAGCAGCTAGCTGGTGATGAAGTAAAGGTCTTGACTATCAAGCGTTTTCGA CGTCTCTTCCTTCATATTGCCGGAAAATATGTCTCTACTGCTAGACGACATATTCTCAAATTCTCAAGTCTATACGCCTA TTCAAAACAGTTTCAAGCCTTATTTGATACAATCTGCCAGATAAATCTGATACTCCCTGTTCCATATAAAGCTAGAGGGC AGGGGAAAACATGCCTAACAGAATAA
Upstream 100 bases:
>100_bases AGGAGAACTAGTGGATTTGAATTAATTCAACTAATCCTTTAATCCTTAAAAGAGAAGAGTACGATTAAGTGCTCTTTTTT ATGGTTGTAAAAAAGTTCAT
Downstream 100 bases:
>100_bases GTCACCTTATTTTAAAAATCGAGCATCAAACCAAGAGAGGAGTCTGCCCTTTTTTAGGAAAAAATCAAGACAAATCTCCT CAATTATGTCTCGAACATCA
Product: transposase, IS1380-Spn1 related, truncation
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MTNLSSVDSEELFQFYREQRNAENFIKERKAGFFGDKTDSSTMIKNEVRMMMGCLAYNLYLFLKQLAGDEVKVLTIKRFR RLFLHIAGKYVSTARRHILKFSSLYAYSKQFQALFDTICQINLILPVPYKARGQGKTCLTE
Sequences:
>Translated_141_residues MTNLSSVDSEELFQFYREQRNAENFIKERKAGFFGDKTDSSTMIKNEVRMMMGCLAYNLYLFLKQLAGDEVKVLTIKRFR RLFLHIAGKYVSTARRHILKFSSLYAYSKQFQALFDTICQINLILPVPYKARGQGKTCLTE >Mature_140_residues TNLSSVDSEELFQFYREQRNAENFIKERKAGFFGDKTDSSTMIKNEVRMMMGCLAYNLYLFLKQLAGDEVKVLTIKRFRR LFLHIAGKYVSTARRHILKFSSLYAYSKQFQALFDTICQINLILPVPYKARGQGKTCLTE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16445; Mature: 16314
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNLSSVDSEELFQFYREQRNAENFIKERKAGFFGDKTDSSTMIKNEVRMMMGCLAYNLY CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LFLKQLAGDEVKVLTIKRFRRLFLHIAGKYVSTARRHILKFSSLYAYSKQFQALFDTICQ HHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH INLILPVPYKARGQGKTCLTE HHHEECCCCCCCCCCCCCCCC >Mature Secondary Structure TNLSSVDSEELFQFYREQRNAENFIKERKAGFFGDKTDSSTMIKNEVRMMMGCLAYNLY CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH LFLKQLAGDEVKVLTIKRFRRLFLHIAGKYVSTARRHILKFSSLYAYSKQFQALFDTICQ HHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH INLILPVPYKARGQGKTCLTE HHHEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA