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The map label for this gene is trxB [C]

Identifier: 169832922

GI number: 169832922

Start: 1548123

End: 1549091

Strand: Direct

Name: trxB [C]

Synonym: SPH_1677

Alternate gene names: 169832922

Gene position: 1548123-1549091 (Clockwise)

Preceding gene: 169832757

Following gene: 169834386

Centisome position: 68.94

GC content: 44.58

Gene sequence:

>969_bases
ATGTCTCAACTCTATGATATTACCATTGTGGGTGGTGGTCCTGTCGGGCTTTTTGCAGCCTTTTATGCCCACCTACGCCA
AGCCAAGGTTCAAATCATCGACTCTCTTCCCCAGCTAGGTGGACAACCTGCTATTCTCTACCCTGAAAAGGAAATCCTAG
ACGTACCAGGCTTCCCAAACCTGACTGGAGAAGAGTTGACTAACCGCTTGATTGAACAGCTAAATGGATTTGATACCCCT
ATTCATCTCAATGAAACGGTTCTTGAGATTGACAAACAAGAAGAAGAATTTGCCATCACAACTTCTAAAGGAAGTCACCT
GACTAAAACAGTTATCATCGCTATGGGTGGCGGTGCCTTCAAACCACGTCCGCTGGAACTTGAAGGTGTTGAGGGCTATG
AAAATATCCACTACCACGTTTCTAACATTCAGCAATACGCTGGTAAGAAAGTGACGATTCTTGGTGGGGGAGACTCGGCT
GTGGATTGGGCTTTGGCTTTTGAAAAAATCGCACCAACTACCCTTGTTCACCGCAGAGATAATTTCCGTGCCTTGGAACA
CAGTGTTCAAGCCTTGCAAGAATCATCTGTAACCATCAAGACACCATTCGCCCCTAGCCAACTCCTTGGAAATGGAAAAA
CACTTGCTAAACTTGAAATCACAAAAGTCAAATCTGATGAAACTGAAACCATTGACCTAGACCACCTCTTTGTCAACTAT
GGTTTCAAATCTTCTGTCGGTAACCTTAAAAACTGGGGGCTCGACCTCAACCGTCACAAGATTATCGTCAACAGCAAACA
GGAATCCAGCCAAGCAGGTATCTATGCTATCGGTGACTGCTGCTACTATGACGGAAAAATTGATCTGATTGCGACAGGCC
TCGGAGAAGCTCCAACTGCTGTCAACAACGCTATCAACTACATTGACCCTGAACAAAAAGTACAACCAAAACACTCTACT
AGTTTATAA

Upstream 100 bases:

>100_bases
ATTATACCATTTTCGGGCATTTTTTTCCCTATCCTAGTCCATTTTACATTGAACAAAAATATGATAAAATAAACTGACTA
GAAAAAACAAAGGAGAAACT

Downstream 100 bases:

>100_bases
AAAAGAACCACGAGTCACATAGGATTCGTGGTTTTATAATTCATCCGCTATCTTATTGATTTTTCTGAGTCTGTGATTGA
CACCACTTTTGGTCAGAGGG

Product: thioredoxin reductase

Products: NA

Alternate protein names: FNR; Fd-NADP+ reductase [H]

Number of amino acids: Translated: 322; Mature: 321

Protein sequence:

>322_residues
MSQLYDITIVGGGPVGLFAAFYAHLRQAKVQIIDSLPQLGGQPAILYPEKEILDVPGFPNLTGEELTNRLIEQLNGFDTP
IHLNETVLEIDKQEEEFAITTSKGSHLTKTVIIAMGGGAFKPRPLELEGVEGYENIHYHVSNIQQYAGKKVTILGGGDSA
VDWALAFEKIAPTTLVHRRDNFRALEHSVQALQESSVTIKTPFAPSQLLGNGKTLAKLEITKVKSDETETIDLDHLFVNY
GFKSSVGNLKNWGLDLNRHKIIVNSKQESSQAGIYAIGDCCYYDGKIDLIATGLGEAPTAVNNAINYIDPEQKVQPKHST
SL

Sequences:

>Translated_322_residues
MSQLYDITIVGGGPVGLFAAFYAHLRQAKVQIIDSLPQLGGQPAILYPEKEILDVPGFPNLTGEELTNRLIEQLNGFDTP
IHLNETVLEIDKQEEEFAITTSKGSHLTKTVIIAMGGGAFKPRPLELEGVEGYENIHYHVSNIQQYAGKKVTILGGGDSA
VDWALAFEKIAPTTLVHRRDNFRALEHSVQALQESSVTIKTPFAPSQLLGNGKTLAKLEITKVKSDETETIDLDHLFVNY
GFKSSVGNLKNWGLDLNRHKIIVNSKQESSQAGIYAIGDCCYYDGKIDLIATGLGEAPTAVNNAINYIDPEQKVQPKHST
SL
>Mature_321_residues
SQLYDITIVGGGPVGLFAAFYAHLRQAKVQIIDSLPQLGGQPAILYPEKEILDVPGFPNLTGEELTNRLIEQLNGFDTPI
HLNETVLEIDKQEEEFAITTSKGSHLTKTVIIAMGGGAFKPRPLELEGVEGYENIHYHVSNIQQYAGKKVTILGGGDSAV
DWALAFEKIAPTTLVHRRDNFRALEHSVQALQESSVTIKTPFAPSQLLGNGKTLAKLEITKVKSDETETIDLDHLFVNYG
FKSSVGNLKNWGLDLNRHKIIVNSKQESSQAGIYAIGDCCYYDGKIDLIATGLGEAPTAVNNAINYIDPEQKVQPKHSTS
L

Specific function: Unknown

COG id: COG0492

COG function: function code O; Thioredoxin reductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ferredoxin--NADP reductase type 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787114, Length=322, Percent_Identity=28.8819875776398, Blast_Score=87, Evalue=2e-18,
Organism=Saccharomyces cerevisiae, GI6320560, Length=321, Percent_Identity=27.4143302180685, Blast_Score=70, Evalue=7e-13,
Organism=Saccharomyces cerevisiae, GI6321898, Length=327, Percent_Identity=26.9113149847095, Blast_Score=69, Evalue=8e-13,

Paralogues:

None

Copy number: 808 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013027
- InterPro:   IPR022890
- InterPro:   IPR001327
- InterPro:   IPR000103 [H]

Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]

EC number: =1.18.1.2 [H]

Molecular weight: Translated: 35226; Mature: 35095

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: PS01128 SHIKIMATE_KINASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQLYDITIVGGGPVGLFAAFYAHLRQAKVQIIDSLPQLGGQPAILYPEKEILDVPGFPN
CCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHEECCCCCC
LTGEELTNRLIEQLNGFDTPIHLNETVLEIDKQEEEFAITTSKGSHLTKTVIIAMGGGAF
CCHHHHHHHHHHHHCCCCCCEECCCCEEEECCCCCEEEEEECCCCCEEEEEEEEECCCCC
KPRPLELEGVEGYENIHYHVSNIQQYAGKKVTILGGGDSAVDWALAFEKIAPTTLVHRRD
CCCCEEECCCCCCCHHHEEHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCHHEEECCC
NFRALEHSVQALQESSVTIKTPFAPSQLLGNGKTLAKLEITKVKSDETETIDLDHLFVNY
CHHHHHHHHHHHHHCCCEEECCCCHHHHHCCCCEEEEEEEEEECCCCCCEEEEEEEEEEC
GFKSSVGNLKNWGLDLNRHKIIVNSKQESSQAGIYAIGDCCYYDGKIDLIATGLGEAPTA
CCHHCCCCHHHCCCCCCCEEEEEECCCCCCCCCEEEEEEEEEECCEEEEEEECCCCCCHH
VNNAINYIDPEQKVQPKHSTSL
HHHHHCCCCCHHHCCCCCCCCC
>Mature Secondary Structure 
SQLYDITIVGGGPVGLFAAFYAHLRQAKVQIIDSLPQLGGQPAILYPEKEILDVPGFPN
CCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHEECCCCCC
LTGEELTNRLIEQLNGFDTPIHLNETVLEIDKQEEEFAITTSKGSHLTKTVIIAMGGGAF
CCHHHHHHHHHHHHCCCCCCEECCCCEEEECCCCCEEEEEECCCCCEEEEEEEEECCCCC
KPRPLELEGVEGYENIHYHVSNIQQYAGKKVTILGGGDSAVDWALAFEKIAPTTLVHRRD
CCCCEEECCCCCCCHHHEEHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCHHEEECCC
NFRALEHSVQALQESSVTIKTPFAPSQLLGNGKTLAKLEITKVKSDETETIDLDHLFVNY
CHHHHHHHHHHHHHCCCEEECCCCHHHHHCCCCEEEEEEEEEECCCCCCEEEEEEEEEEC
GFKSSVGNLKNWGLDLNRHKIIVNSKQESSQAGIYAIGDCCYYDGKIDLIATGLGEAPTA
CCHHCCCCHHHCCCCCCCEEEEEECCCCCCCCCEEEEEEEEEECCEEEEEEECCCCCCHH
VNNAINYIDPEQKVQPKHSTSL
HHHHHCCCCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA