Click here to switch to the map view.

The map label for this gene is yeaB [H]

Identifier: 169832757

GI number: 169832757

Start: 1538255

End: 1539439

Strand: Direct

Name: yeaB [H]

Synonym: SPH_1668

Alternate gene names: 169832757

Gene position: 1538255-1539439 (Clockwise)

Preceding gene: 169834079

Following gene: 169832922

Centisome position: 68.5

GC content: 42.19

Gene sequence:

>1185_bases
ATGAAGCAATCTATCTCAAATCTCAAGTTAGCTGAGCGTGGAGCCATTATCAGTATTTCGACCTATTTGATCTTGTCTGC
AGCCAAATTAGCAACTGGTCATCTCCTTCATTCATCCAGTTTGGTGGCCGATGGTTTTAATAACGTATCGGACATCATTG
GAAATGTGGCCCTCTTAATCGGGATTCGGATGGCGCGCCAGCCTGCAGACCGTGACCACCGTTTTGGTCATTGGAAGATT
GAAGATTTGGCAAGCTTGATCACTTCTATCATCATGTTCTATGTCGGTTTCGATGTTCTAAGAGATACCATTCAAAAGAT
TCTCAGTCGGGAAGAAACGGTCATTGATCCTCTTGGTGCAACTCTAGGAATCATTTCTGCAGCGATTATGTTTGTGGTCT
ATCTCTACAATACTCGCCTCAGTAAGAAATCCAACTCCAAGGCGCTGAAGGCAGCTGCTAAGGACAATCTTTCTGACGCT
GTTACCTCACTTGGAACCGCCATTGCCATCCTAGCTAGTAGTTTTAATTATCCGATTGTGGATAAACTGGTTGCTATCAT
CATCACTTTCTTTATCTTGAAGACTGCCTATGATATCTTCATCGAGTCTTCCTTTAGTCTTTCAGATGGCTTTGACGACC
GCCTGCTCGAGGACTACCAAAAGGCTATCATGGAAATTCCCAAAATCAGCAAGGTCAAATCGCAAAGAGGTCGCACCTAC
GGTAGCAACATCTACCTGGATATTACACTAGAGATGAATCCTGACTTGTCTGTTTTTGAAAGCCATGAAATCGCGGATCA
GGTCGAGTCTATGCTGGAGGAGCGTTTTGGCGTCTTTGATACCGATGTCCATATCGAACCAGCACCTATCCCTGAGGATG
AAATTTTAGACAATGTCTATAAAAAATTGCTTATGCGTGAACAATTGATTGACCAAGGAAACCAACTAGAAGAACTCTTG
ACTGATGATTTTGTCTATATTCGCCAAGATGGAGAGCAGATGGATAAAGAGGCTTATAAGACCAAAAAAGAGTTAAATTC
TGCTATCAAGGACATTCAAATTACTTCCATCAGTCAAAAAACCAAACTCATCTGCTATGAGTTAGATGGTATCATCCATA
CCAGTATCTGGCGTCGCCACGAAACCTGGCAAAATATCTTTCATCAAGAAACCAAAAAAGAATAG

Upstream 100 bases:

>100_bases
AATTTTGGGGAGTTTTCAAAGAATAAAAACTGCCTTATTTGAATTTTTCCTTGAAAACCAGTATAATGGTAGAATGCTAT
GTGACTAGAAAGGAAGTTGA

Downstream 100 bases:

>100_bases
AGAAATCCTTTCATGAGACGGGATTTTTCTATTCTTTTATACTCAATAAAAATCAAAGTGCAAATTAGGAAGCCAGTCAC
AGGCTGTACTTGAGTCGGCA

Product: cation efflux family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 394; Mature: 394

Protein sequence:

>394_residues
MKQSISNLKLAERGAIISISTYLILSAAKLATGHLLHSSSLVADGFNNVSDIIGNVALLIGIRMARQPADRDHRFGHWKI
EDLASLITSIIMFYVGFDVLRDTIQKILSREETVIDPLGATLGIISAAIMFVVYLYNTRLSKKSNSKALKAAAKDNLSDA
VTSLGTAIAILASSFNYPIVDKLVAIIITFFILKTAYDIFIESSFSLSDGFDDRLLEDYQKAIMEIPKISKVKSQRGRTY
GSNIYLDITLEMNPDLSVFESHEIADQVESMLEERFGVFDTDVHIEPAPIPEDEILDNVYKKLLMREQLIDQGNQLEELL
TDDFVYIRQDGEQMDKEAYKTKKELNSAIKDIQITSISQKTKLICYELDGIIHTSIWRRHETWQNIFHQETKKE

Sequences:

>Translated_394_residues
MKQSISNLKLAERGAIISISTYLILSAAKLATGHLLHSSSLVADGFNNVSDIIGNVALLIGIRMARQPADRDHRFGHWKI
EDLASLITSIIMFYVGFDVLRDTIQKILSREETVIDPLGATLGIISAAIMFVVYLYNTRLSKKSNSKALKAAAKDNLSDA
VTSLGTAIAILASSFNYPIVDKLVAIIITFFILKTAYDIFIESSFSLSDGFDDRLLEDYQKAIMEIPKISKVKSQRGRTY
GSNIYLDITLEMNPDLSVFESHEIADQVESMLEERFGVFDTDVHIEPAPIPEDEILDNVYKKLLMREQLIDQGNQLEELL
TDDFVYIRQDGEQMDKEAYKTKKELNSAIKDIQITSISQKTKLICYELDGIIHTSIWRRHETWQNIFHQETKKE
>Mature_394_residues
MKQSISNLKLAERGAIISISTYLILSAAKLATGHLLHSSSLVADGFNNVSDIIGNVALLIGIRMARQPADRDHRFGHWKI
EDLASLITSIIMFYVGFDVLRDTIQKILSREETVIDPLGATLGIISAAIMFVVYLYNTRLSKKSNSKALKAAAKDNLSDA
VTSLGTAIAILASSFNYPIVDKLVAIIITFFILKTAYDIFIESSFSLSDGFDDRLLEDYQKAIMEIPKISKVKSQRGRTY
GSNIYLDITLEMNPDLSVFESHEIADQVESMLEERFGVFDTDVHIEPAPIPEDEILDNVYKKLLMREQLIDQGNQLEELL
TDDFVYIRQDGEQMDKEAYKTKKELNSAIKDIQITSISQKTKLICYELDGIIHTSIWRRHETWQNIFHQETKKE

Specific function: Unknown

COG id: COG0053

COG function: function code P; Predicted Co/Zn/Cd cation transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family [H]

Homologues:

Organism=Escherichia coli, GI1790349, Length=261, Percent_Identity=26.4367816091954, Blast_Score=93, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002524 [H]

Pfam domain/function: PF01545 Cation_efflux [H]

EC number: NA

Molecular weight: Translated: 44537; Mature: 44537

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQSISNLKLAERGAIISISTYLILSAAKLATGHLLHSSSLVADGFNNVSDIIGNVALLI
CCCCHHHCHHHHCCCEEEEHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHH
GIRMARQPADRDHRFGHWKIEDLASLITSIIMFYVGFDVLRDTIQKILSREETVIDPLGA
HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
TLGIISAAIMFVVYLYNTRLSKKSNSKALKAAAKDNLSDAVTSLGTAIAILASSFNYPIV
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHH
DKLVAIIITFFILKTAYDIFIESSFSLSDGFDDRLLEDYQKAIMEIPKISKVKSQRGRTY
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCC
GSNIYLDITLEMNPDLSVFESHEIADQVESMLEERFGVFDTDVHIEPAPIPEDEILDNVY
CCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCHHHHHHHHH
KKLLMREQLIDQGNQLEELLTDDFVYIRQDGEQMDKEAYKTKKELNSAIKDIQITSISQK
HHHHHHHHHHHCCHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCEEEEECCH
TKLICYELDGIIHTSIWRRHETWQNIFHQETKKE
HEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKQSISNLKLAERGAIISISTYLILSAAKLATGHLLHSSSLVADGFNNVSDIIGNVALLI
CCCCHHHCHHHHCCCEEEEHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHH
GIRMARQPADRDHRFGHWKIEDLASLITSIIMFYVGFDVLRDTIQKILSREETVIDPLGA
HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
TLGIISAAIMFVVYLYNTRLSKKSNSKALKAAAKDNLSDAVTSLGTAIAILASSFNYPIV
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHH
DKLVAIIITFFILKTAYDIFIESSFSLSDGFDDRLLEDYQKAIMEIPKISKVKSQRGRTY
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCC
GSNIYLDITLEMNPDLSVFESHEIADQVESMLEERFGVFDTDVHIEPAPIPEDEILDNVY
CCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCHHHHHHHHH
KKLLMREQLIDQGNQLEELLTDDFVYIRQDGEQMDKEAYKTKKELNSAIKDIQITSISQK
HHHHHHHHHHHCCHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHCEEEEECCH
TKLICYELDGIIHTSIWRRHETWQNIFHQETKKE
HEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969499; 9384377; 8951816 [H]