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The map label for this gene is yhfE [H]

Identifier: 169832514

GI number: 169832514

Start: 668817

End: 669854

Strand: Direct

Name: yhfE [H]

Synonym: SPH_0720

Alternate gene names: 169832514

Gene position: 668817-669854 (Clockwise)

Preceding gene: 169833916

Following gene: 169833144

Centisome position: 29.78

GC content: 45.18

Gene sequence:

>1038_bases
ATGAATCAAACAGTAGAATATATCAAAGAACTGACAGCCATCGCATCGCCAACGGGCTTCACTCGTGAAATTTCGAATTA
TTTAGTCAAGACTCTAGAAGGTTTTGGTTACCAGCCAGTTCGCACAGCCAAGGGTGGTGTCAATGTGACCATCAAAGGTC
AAAAAAACGAAGAACATCGCTATGTAACTGCCCATGTGGACACACTCGGAGCCATTGTTCGTGCTGTCAAACCTGACGGT
CGTCTCAAATTGGACCGGATCGGTGGTTTTCCTTGGAACATGATTGAGGGTGAAAACTGTACCGTTCATGTGACTAGTAC
AGGTAAAACGGTATCTGGAACTATCCTCATCCACCAGACTTCTTGCCATGTATACAAAGATGCAGGAACTGCTGAACGCA
CTCAGGACAATATGGAAGTTCGTTTAGACGAAAAAGTGACCAATGAAAAAGAAACACGTGCCTTGGGTATTGAGGTTGGT
GACTTCATCAGCTTTGACCCGCGAACTGTCGTGACAGAGACTGGTTTTATCAAGTCTCGACATTTGGACGACAAGGTCAG
CGCAGCAATTTTGCTCAATCTTCTTCGTGTTTATAAGGAAGAGGGAATTGAATTGCCAGTAACAACTCATTTTGCTTTTT
CAGTTTTCGAAGAGGTGGGCCACGGTGCTAATTCCAATATTCCAACTCAAGTGGTGGAATATCTAGCTGTCGATATGGGG
GCAATGGGAGATGACCAGCAGACGGATGAGTATACAGTGTCTATCTGTGTCAAGGACGCTTCAGGTCCCTATCACTATGA
CTTCCGTCAACATTTAGTGGCTTTGGCAAAGGAGCAAGATATTCCATTTAAGCTCGACATTTATCCATTTTACGGTTCGG
ATGCTTCAGCAGCTATGTCAGCAGGAGCAGAGGTTAAGCATGCCCTCCTTGGAGCTGGTATTGAATCCAGTCACTCTTAC
GAACGAACACACATTGATTCGGTAGTGGCGACTGAGCGTATGGTAGACGCCTATCTCAAGAGTACCTTGGTAGACTAA

Upstream 100 bases:

>100_bases
TAATCACTTAAATCACTTTTGTAGCCAAGTCTACAGGAGTGATTTTCTTTTTTTATCCGATGATAAATGTGTTATAATAG
GTAGCGAAAGAGGTGAAGAA

Downstream 100 bases:

>100_bases
TATGTGCTTGATTTGTCAAAGAATTGAATGGATCAAGGCAGGGGAAAATCCCTACTTTGTAAAAGAACTAGAAACAGGCT
ATGTTGTCATTGGAGATCAC

Product: peptidase, M42

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MNQTVEYIKELTAIASPTGFTREISNYLVKTLEGFGYQPVRTAKGGVNVTIKGQKNEEHRYVTAHVDTLGAIVRAVKPDG
RLKLDRIGGFPWNMIEGENCTVHVTSTGKTVSGTILIHQTSCHVYKDAGTAERTQDNMEVRLDEKVTNEKETRALGIEVG
DFISFDPRTVVTETGFIKSRHLDDKVSAAILLNLLRVYKEEGIELPVTTHFAFSVFEEVGHGANSNIPTQVVEYLAVDMG
AMGDDQQTDEYTVSICVKDASGPYHYDFRQHLVALAKEQDIPFKLDIYPFYGSDASAAMSAGAEVKHALLGAGIESSHSY
ERTHIDSVVATERMVDAYLKSTLVD

Sequences:

>Translated_345_residues
MNQTVEYIKELTAIASPTGFTREISNYLVKTLEGFGYQPVRTAKGGVNVTIKGQKNEEHRYVTAHVDTLGAIVRAVKPDG
RLKLDRIGGFPWNMIEGENCTVHVTSTGKTVSGTILIHQTSCHVYKDAGTAERTQDNMEVRLDEKVTNEKETRALGIEVG
DFISFDPRTVVTETGFIKSRHLDDKVSAAILLNLLRVYKEEGIELPVTTHFAFSVFEEVGHGANSNIPTQVVEYLAVDMG
AMGDDQQTDEYTVSICVKDASGPYHYDFRQHLVALAKEQDIPFKLDIYPFYGSDASAAMSAGAEVKHALLGAGIESSHSY
ERTHIDSVVATERMVDAYLKSTLVD
>Mature_345_residues
MNQTVEYIKELTAIASPTGFTREISNYLVKTLEGFGYQPVRTAKGGVNVTIKGQKNEEHRYVTAHVDTLGAIVRAVKPDG
RLKLDRIGGFPWNMIEGENCTVHVTSTGKTVSGTILIHQTSCHVYKDAGTAERTQDNMEVRLDEKVTNEKETRALGIEVG
DFISFDPRTVVTETGFIKSRHLDDKVSAAILLNLLRVYKEEGIELPVTTHFAFSVFEEVGHGANSNIPTQVVEYLAVDMG
AMGDDQQTDEYTVSICVKDASGPYHYDFRQHLVALAKEQDIPFKLDIYPFYGSDASAAMSAGAEVKHALLGAGIESSHSY
ERTHIDSVVATERMVDAYLKSTLVD

Specific function: Unknown

COG id: COG1363

COG function: function code G; Cellulase M and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M42 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008007 [H]

Pfam domain/function: PF05343 Peptidase_M42 [H]

EC number: NA

Molecular weight: Translated: 38040; Mature: 38040

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQTVEYIKELTAIASPTGFTREISNYLVKTLEGFGYQPVRTAKGGVNVTIKGQKNEEHR
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEECCCCEEEEEECCCCCCCE
YVTAHVDTLGAIVRAVKPDGRLKLDRIGGFPWNMIEGENCTVHVTSTGKTVSGTILIHQT
EEEEEHHHHHHHHHHCCCCCCEEEEECCCCCCCEECCCCCEEEEEECCCEEEEEEEEEEC
SCHVYKDAGTAERTQDNMEVRLDEKVTNEKETRALGIEVGDFISFDPRTVVTETGFIKSR
CCEEEECCCCCHHCCCCCEEEECHHHCCCHHHEEECCCCCCCCCCCCCEEEEECCCCCCC
HLDDKVSAAILLNLLRVYKEEGIELPVTTHFAFSVFEEVGHGANSNIPTQVVEYLAVDMG
CCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHC
AMGDDQQTDEYTVSICVKDASGPYHYDFRQHLVALAKEQDIPFKLDIYPFYGSDASAAMS
CCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCHHHHHH
AGAEVKHALLGAGIESSHSYERTHIDSVVATERMVDAYLKSTLVD
CCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNQTVEYIKELTAIASPTGFTREISNYLVKTLEGFGYQPVRTAKGGVNVTIKGQKNEEHR
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEECCCCEEEEEECCCCCCCE
YVTAHVDTLGAIVRAVKPDGRLKLDRIGGFPWNMIEGENCTVHVTSTGKTVSGTILIHQT
EEEEEHHHHHHHHHHCCCCCCEEEEECCCCCCCEECCCCCEEEEEECCCEEEEEEEEEEC
SCHVYKDAGTAERTQDNMEVRLDEKVTNEKETRALGIEVGDFISFDPRTVVTETGFIKSR
CCEEEECCCCCHHCCCCCEEEECHHHCCCHHHEEECCCCCCCCCCCCCEEEEECCCCCCC
HLDDKVSAAILLNLLRVYKEEGIELPVTTHFAFSVFEEVGHGANSNIPTQVVEYLAVDMG
CCCHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHC
AMGDDQQTDEYTVSICVKDASGPYHYDFRQHLVALAKEQDIPFKLDIYPFYGSDASAAMS
CCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCHHHHHH
AGAEVKHALLGAGIESSHSYERTHIDSVVATERMVDAYLKSTLVD
CCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]