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The map label for this gene is yaaO [H]

Identifier: 169824973

GI number: 169824973

Start: 1388788

End: 1390032

Strand: Direct

Name: yaaO [H]

Synonym: FMG_1276

Alternate gene names: 169824973

Gene position: 1388788-1390032 (Clockwise)

Preceding gene: 169824972

Following gene: 169824974

Centisome position: 77.26

GC content: 32.53

Gene sequence:

>1245_bases
ATGCGTAATTTGTATGATAATCTTATAAATAGAAAAGAAAAAGTAAGCTTTCATATGCCTGGTCATAAGGGCAAGATGTT
GGAAGGAATGAACGATTTTCTTGAAAATATTTTAAAGATTGATGTAACAGAATTATCTGATACAGATGATTTGTACCATG
CAAATAATATTATAGCTGAGGGCAGGAATAATCTTGCCCTTTTTTCGCATGCAAAAAAATCAATGTATCTTGTCAATGGT
TCAACCTCTGGTATCGTCGCAAGTATAATGAGCGTATTAGATGAGAACGAAAAAATTTTGATAGAGAAAAATTGTCACAA
ATCCGTAATCAACGGCGTAAGACTCGCACGTGGAGAATCTGTGGAGATCGACTGTGATGGAGTGTGTGAACAAGAAGTTT
TGATAGAAAATTTGAAAAAAGATTCATCTATCAAAGCAGTTCTCATCACACGTCCCAATTATTATGGGATTTATCAGCCT
ATCGAAAAACTTGTAGAATACTGCCACGAAAATAATATCAAGATTATCGTAGACGAAGCACACGGAACGCATTTCGCACT
GGACTGTTTCGACAAAAATGCAATGCAACTAGGTTGTGATATTTCTATTAATTCATATCACAAAACAATGCCTGCATTCA
CACAAACTGCTGCGATTAATTTCAACTGCGAATATGAATTGATAGATAAAACCATAAGTAATCTACAAATGATTATGACA
TCTTCCCCATCGTATATTTTCATGACATCTGTAGAATATGCAATTGATTATTGCACTAAAAATGAAAACAAATACGCTGA
ATTAAAAGAAATAATAGATTGGTTTTATAGTGAGATTGAAGGCTTGGATTTCATAAGAAAAGCTCCTATTCAAAAAAATT
GCAAGAGAGATTTTACAAGAATTGTCCTTGAATGCGACAATCCAAGTGATGTCAATGAGCATTTGATAAAAAACGGAATT
TATATTGAAATGATAGACGACAAAAATCTCGTATTGATTTCAACGATTGCAGATGAGAAAAAAGATTTTGAAATCTTGCT
GGAAGCTCTTCGTTCATATAAAAAATCAGACTCTACGAAAACTTATAAAACGTACGATTATTTACTGAACAAAATAATCG
CCAATGATATCGTGATTTATCCACCAGGAAAAATTTTTGCGAAGAAAAATTCCACAATTAATCAAGAACAAATCGATGAG
CTGAACGATTTATCATCAAAGGGCGTAAATATTTTATTAAAATAG

Upstream 100 bases:

>100_bases
AATTTTAATAACGATATTTACAAACCTTATGAATTAGGTTGCGCAATGCAAAAGAAACGTACTGAATGTGCAATTATGGT
TGAAGTGGAGAAAATGTTGA

Downstream 100 bases:

>100_bases
GTTGACTTTTTTATTGTAACGGTGTATTATTGTTATAGAACAGATGAGAAAGGAGATAATATGCAATTTGATGATAATAA
GCCTATCTACATTCAAATCG

Product: putative arginine/lysine/ornithine decarboxylase

Products: cadaverine; CO2

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 414

Protein sequence:

>414_residues
MRNLYDNLINRKEKVSFHMPGHKGKMLEGMNDFLENILKIDVTELSDTDDLYHANNIIAEGRNNLALFSHAKKSMYLVNG
STSGIVASIMSVLDENEKILIEKNCHKSVINGVRLARGESVEIDCDGVCEQEVLIENLKKDSSIKAVLITRPNYYGIYQP
IEKLVEYCHENNIKIIVDEAHGTHFALDCFDKNAMQLGCDISINSYHKTMPAFTQTAAINFNCEYELIDKTISNLQMIMT
SSPSYIFMTSVEYAIDYCTKNENKYAELKEIIDWFYSEIEGLDFIRKAPIQKNCKRDFTRIVLECDNPSDVNEHLIKNGI
YIEMIDDKNLVLISTIADEKKDFEILLEALRSYKKSDSTKTYKTYDYLLNKIIANDIVIYPPGKIFAKKNSTINQEQIDE
LNDLSSKGVNILLK

Sequences:

>Translated_414_residues
MRNLYDNLINRKEKVSFHMPGHKGKMLEGMNDFLENILKIDVTELSDTDDLYHANNIIAEGRNNLALFSHAKKSMYLVNG
STSGIVASIMSVLDENEKILIEKNCHKSVINGVRLARGESVEIDCDGVCEQEVLIENLKKDSSIKAVLITRPNYYGIYQP
IEKLVEYCHENNIKIIVDEAHGTHFALDCFDKNAMQLGCDISINSYHKTMPAFTQTAAINFNCEYELIDKTISNLQMIMT
SSPSYIFMTSVEYAIDYCTKNENKYAELKEIIDWFYSEIEGLDFIRKAPIQKNCKRDFTRIVLECDNPSDVNEHLIKNGI
YIEMIDDKNLVLISTIADEKKDFEILLEALRSYKKSDSTKTYKTYDYLLNKIIANDIVIYPPGKIFAKKNSTINQEQIDE
LNDLSSKGVNILLK
>Mature_414_residues
MRNLYDNLINRKEKVSFHMPGHKGKMLEGMNDFLENILKIDVTELSDTDDLYHANNIIAEGRNNLALFSHAKKSMYLVNG
STSGIVASIMSVLDENEKILIEKNCHKSVINGVRLARGESVEIDCDGVCEQEVLIENLKKDSSIKAVLITRPNYYGIYQP
IEKLVEYCHENNIKIIVDEAHGTHFALDCFDKNAMQLGCDISINSYHKTMPAFTQTAAINFNCEYELIDKTISNLQMIMT
SSPSYIFMTSVEYAIDYCTKNENKYAELKEIIDWFYSEIEGLDFIRKAPIQKNCKRDFTRIVLECDNPSDVNEHLIKNGI
YIEMIDDKNLVLISTIADEKKDFEILLEALRSYKKSDSTKTYKTYDYLLNKIIANDIVIYPPGKIFAKKNSTINQEQIDE
LNDLSSKGVNILLK

Specific function: Unknown

COG id: COG1982

COG function: function code E; Arginine/lysine/ornithine decarboxylases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Orn/Lys/Arg decarboxylase class-I family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000310
- InterPro:   IPR008286
- InterPro:   IPR015424
- InterPro:   IPR015421 [H]

Pfam domain/function: PF01276 OKR_DC_1; PF03711 OKR_DC_1_C [H]

EC number: 4.1.1.18

Molecular weight: Translated: 47379; Mature: 47379

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNLYDNLINRKEKVSFHMPGHKGKMLEGMNDFLENILKIDVTELSDTDDLYHANNIIAE
CCCHHHHHCCCHHEEEEECCCCCCHHHHHHHHHHHHHHEEEHHCCCCCCCHHHHCCHHCC
GRNNLALFSHAKKSMYLVNGSTSGIVASIMSVLDENEKILIEKNCHKSVINGVRLARGES
CCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHCCCCEEEEECCHHHHHHCCCEECCCCE
VEIDCDGVCEQEVLIENLKKDSSIKAVLITRPNYYGIYQPIEKLVEYCHENNIKIIVDEA
EEECCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECC
HGTHFALDCFDKNAMQLGCDISINSYHKTMPAFTQTAAINFNCEYELIDKTISNLQMIMT
CCCEEEEEECCCCCEEEECEEEECCHHHHCCCHHHEEEEEECCCHHHHHHHHHHHEEEEE
SSPSYIFMTSVEYAIDYCTKNENKYAELKEIIDWFYSEIEGLDFIRKAPIQKNCKRDFTR
CCCCEEEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHEE
IVLECDNPSDVNEHLIKNGIYIEMIDDKNLVLISTIADEKKDFEILLEALRSYKKSDSTK
EEEECCCCCCHHHHHHHCCCEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCC
TYKTYDYLLNKIIANDIVIYPPGKIFAKKNSTINQEQIDELNDLSSKGVNILLK
HHHHHHHHHHHHHHCCEEEECCCCEEECCCCCCCHHHHHHHHHHHCCCCEEEEC
>Mature Secondary Structure
MRNLYDNLINRKEKVSFHMPGHKGKMLEGMNDFLENILKIDVTELSDTDDLYHANNIIAE
CCCHHHHHCCCHHEEEEECCCCCCHHHHHHHHHHHHHHEEEHHCCCCCCCHHHHCCHHCC
GRNNLALFSHAKKSMYLVNGSTSGIVASIMSVLDENEKILIEKNCHKSVINGVRLARGES
CCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHCCCCEEEEECCHHHHHHCCCEECCCCE
VEIDCDGVCEQEVLIENLKKDSSIKAVLITRPNYYGIYQPIEKLVEYCHENNIKIIVDEA
EEECCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCEEEEECC
HGTHFALDCFDKNAMQLGCDISINSYHKTMPAFTQTAAINFNCEYELIDKTISNLQMIMT
CCCEEEEEECCCCCEEEECEEEECCHHHHCCCHHHEEEEEECCCHHHHHHHHHHHEEEEE
SSPSYIFMTSVEYAIDYCTKNENKYAELKEIIDWFYSEIEGLDFIRKAPIQKNCKRDFTR
CCCCEEEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHEE
IVLECDNPSDVNEHLIKNGIYIEMIDDKNLVLISTIADEKKDFEILLEALRSYKKSDSTK
EEEECCCCCCHHHHHHHCCCEEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCC
TYKTYDYLLNKIIANDIVIYPPGKIFAKKNSTINQEQIDELNDLSSKGVNILLK
HHHHHHHHHHHHHHCCEEEECCCCEEECCCCCCCHHHHHHHHHHHCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: L-lysine

Specific reaction: L-lysine = cadaverine + CO2

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]