| Definition | Finegoldia magna ATCC 29328 chromosome, complete genome. |
|---|---|
| Accession | NC_010376 |
| Length | 1,797,577 |
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The map label for this gene is spoVD [H]
Identifier: 169824310
GI number: 169824310
Start: 675594
End: 677813
Strand: Direct
Name: spoVD [H]
Synonym: FMG_0613
Alternate gene names: 169824310
Gene position: 675594-677813 (Clockwise)
Preceding gene: 169824309
Following gene: 169824311
Centisome position: 37.58
GC content: 31.13
Gene sequence:
>2220_bases ATGAGAAGGCGCAATTTAAGCAAAGGAAAAATTAATAAAAATTTCAATAAAAACTACAATTCTCGTATTGTAGTTTTATT TTGTATATTGACATTTATTGTTCTACTAATAGTAGGGAAGTTGATTTATTTACAATTAACTCCGGCTGGAGATAAATATC GAAAATTATCTGCAAAACAAAGTACCAATACTATTAATATTGACGCTGAAAGAGGAAAAATATTGGATACAAATGGTGAA ACGTTGGCTGATAATGTCGTATCAAATAATTTGTATGTGAATGCTACTTATTTAAATGATCAAGCAAAATCTAATTTAGT AGATTCATTAAGCAAAAGTTTAAGTATGAAACCAGAAGAGTTAAGAAAAATTCTAGAAAAAAAGAAAACTGTTTTGGTTA AGCCTTCGTTATCTAAATCGGAAATAGATAATATAAAAAAATTGCCTATTAGTAACCAGAAATTCATCAGTGTTGTATCT GAAAAAAAGAGATATTATCCAAATAAAGAAATGTTATCTCAGGTTTTAGGATTTACTAATGTGAATAATGATGGAGTAGT AGGCTTGGAAAGCTTTTATAATTCTAAATTAAAAGGCAAACCTGGTAAAAGAATTCTAAATAGCTCTGTAAATCGATCGA TAGATTTATCAGATGACAGCTCTGTCATTATAAATCCAGAAAATGGATATGATTTAAAAACAACCATAGATATTACTATC CAAGGTTTTGTAGAAGATAGTTTGAAGGATATCGAGAATAATTTCAAACCAAAATCCGCAACAATTATTGTTATGAATCC AAATAATGGGGACGTTTTGGGAATGGGATCTTATCCTAATTTTAATCCAAATGACCCTAAAAAACCGCTTTTAAAAGAAC AATTAGATGAATTAAATGATTTGAAAAAAGAAAATGACGAAGATAAAATCAGTAAATTTTATTTTAATATGTGGGAAAAT AAGGCAACTTCATGGACTTATGAGCCAGGAAGCGTATTTAAAACAATAACAAGTGCAGCTGCAACTGAAGAGCACACAGC AACACAACATTCACATTATTTTTGTAATGGGTTTATTAGAGATATTCCCGGTGTTGTTATAAGGTGTGAAAGATACTGGA ATCCACATGGAGACGAAACATTCCAGGAAGCCTTCAATAACTCTTGCAATATTGCTTATGTACACATCGGTAGAGATTTA GGGAAAGCAAATATGCAAAAATACGTAAATGGGTTTGGATTTAATCAAAAAACAGATATTGATTTGCCGGCAGAAGAATT GGGGATAGCTCCAAAAAGTGTAAAAGATATTGATGCCGCTAGACTTGCTACACTTTCTTACGGCCATGGAATATCAGCGA CACCCATTCAAATGTTGACCGCTCTAAATTCGATTGTAAATGGTGGTATGTTAATAGAACCTCATGTAGCGAAGGAATTT ATATCAAAAGATACAAAAAAGGTAGAAAAAGTTCAATCAAAAGTCAAAAGACAAATAATTTCAGCACAAACTTCTAAGCA AATTAACAAAATGTTGCAAGGAGTTGTCGATGATGGAAGTGGTAAAAAGGCTGCAATACAAGGATTTGGAATTGGTGGTA AAACTGGAACGAGTATAAAAATTGAAGATGGTAAATACACTGATAGTAAAACTACTGCATCTTTTTTCGGTTCTTTTCCA ACAGATCATCCAGAATACACAGTTTTGGTTGTAGTAGACGAGCCTCAAAGAAAAAATGGAGGAAGTGCAGTATGCGCGCC TTCCGCAGGCAAGATTTTTTCTAAGATAATTGAATACAAAAGAATGAACAAGACTAGATTAGATTCTGACGATTCAGATA AAATTACTGTTCCTGAATTAGAGGGACTTACATTAAAGTTAGCTGTTGATAAGTTAAATTCATTAGGGTTAAAATCTAAA GTTACAAATTCAGATTCAAATTTGAATTCAATTGTAACATCACAAGAAACAGAAGCTTATTCTAAAGTGAATAAGGGAGA TATTATTGAGCTCACAACAGGAAGTGTTGAAGACTCATTAATTAGAATTCCAGAGATAGTAGGATTCACAGTTGAAGATG CGGTGGATACATTAAAAAAATACGGAATTAATAATATTGAAATTAAAAATGGTAAAAAAGGGAAAGTAGTCAAAACTGAT CCTGAAGAAAACAAATTGATTGATCCAAAATCTTATATTAAAATTTATACTGAACAATAA
Upstream 100 bases:
>100_bases AATTAACTAATAAAAACATTGAAGAAATAGCAAAAAATAATTTGGGTATGCAATTTCCTGAAAATGCTCAAATTATGTAC TTAAAATTAGAGGAAAAATA
Downstream 100 bases:
>100_bases AAAACACTGAATAATAAAATTCTCGTGTGGTATAATAATTACTTATGAGGTATAAAATTGGACATAATTTGTGTTCATAA TTTAAGGAGATAAATATGAA
Product: cell division protein
Products: NA
Alternate protein names: Sporulation-specific penicillin-binding protein [H]
Number of amino acids: Translated: 739; Mature: 739
Protein sequence:
>739_residues MRRRNLSKGKINKNFNKNYNSRIVVLFCILTFIVLLIVGKLIYLQLTPAGDKYRKLSAKQSTNTINIDAERGKILDTNGE TLADNVVSNNLYVNATYLNDQAKSNLVDSLSKSLSMKPEELRKILEKKKTVLVKPSLSKSEIDNIKKLPISNQKFISVVS EKKRYYPNKEMLSQVLGFTNVNNDGVVGLESFYNSKLKGKPGKRILNSSVNRSIDLSDDSSVIINPENGYDLKTTIDITI QGFVEDSLKDIENNFKPKSATIIVMNPNNGDVLGMGSYPNFNPNDPKKPLLKEQLDELNDLKKENDEDKISKFYFNMWEN KATSWTYEPGSVFKTITSAAATEEHTATQHSHYFCNGFIRDIPGVVIRCERYWNPHGDETFQEAFNNSCNIAYVHIGRDL GKANMQKYVNGFGFNQKTDIDLPAEELGIAPKSVKDIDAARLATLSYGHGISATPIQMLTALNSIVNGGMLIEPHVAKEF ISKDTKKVEKVQSKVKRQIISAQTSKQINKMLQGVVDDGSGKKAAIQGFGIGGKTGTSIKIEDGKYTDSKTTASFFGSFP TDHPEYTVLVVVDEPQRKNGGSAVCAPSAGKIFSKIIEYKRMNKTRLDSDDSDKITVPELEGLTLKLAVDKLNSLGLKSK VTNSDSNLNSIVTSQETEAYSKVNKGDIIELTTGSVEDSLIRIPEIVGFTVEDAVDTLKKYGINNIEIKNGKKGKVVKTD PEENKLIDPKSYIKIYTEQ
Sequences:
>Translated_739_residues MRRRNLSKGKINKNFNKNYNSRIVVLFCILTFIVLLIVGKLIYLQLTPAGDKYRKLSAKQSTNTINIDAERGKILDTNGE TLADNVVSNNLYVNATYLNDQAKSNLVDSLSKSLSMKPEELRKILEKKKTVLVKPSLSKSEIDNIKKLPISNQKFISVVS EKKRYYPNKEMLSQVLGFTNVNNDGVVGLESFYNSKLKGKPGKRILNSSVNRSIDLSDDSSVIINPENGYDLKTTIDITI QGFVEDSLKDIENNFKPKSATIIVMNPNNGDVLGMGSYPNFNPNDPKKPLLKEQLDELNDLKKENDEDKISKFYFNMWEN KATSWTYEPGSVFKTITSAAATEEHTATQHSHYFCNGFIRDIPGVVIRCERYWNPHGDETFQEAFNNSCNIAYVHIGRDL GKANMQKYVNGFGFNQKTDIDLPAEELGIAPKSVKDIDAARLATLSYGHGISATPIQMLTALNSIVNGGMLIEPHVAKEF ISKDTKKVEKVQSKVKRQIISAQTSKQINKMLQGVVDDGSGKKAAIQGFGIGGKTGTSIKIEDGKYTDSKTTASFFGSFP TDHPEYTVLVVVDEPQRKNGGSAVCAPSAGKIFSKIIEYKRMNKTRLDSDDSDKITVPELEGLTLKLAVDKLNSLGLKSK VTNSDSNLNSIVTSQETEAYSKVNKGDIIELTTGSVEDSLIRIPEIVGFTVEDAVDTLKKYGINNIEIKNGKKGKVVKTD PEENKLIDPKSYIKIYTEQ >Mature_739_residues MRRRNLSKGKINKNFNKNYNSRIVVLFCILTFIVLLIVGKLIYLQLTPAGDKYRKLSAKQSTNTINIDAERGKILDTNGE TLADNVVSNNLYVNATYLNDQAKSNLVDSLSKSLSMKPEELRKILEKKKTVLVKPSLSKSEIDNIKKLPISNQKFISVVS EKKRYYPNKEMLSQVLGFTNVNNDGVVGLESFYNSKLKGKPGKRILNSSVNRSIDLSDDSSVIINPENGYDLKTTIDITI QGFVEDSLKDIENNFKPKSATIIVMNPNNGDVLGMGSYPNFNPNDPKKPLLKEQLDELNDLKKENDEDKISKFYFNMWEN KATSWTYEPGSVFKTITSAAATEEHTATQHSHYFCNGFIRDIPGVVIRCERYWNPHGDETFQEAFNNSCNIAYVHIGRDL GKANMQKYVNGFGFNQKTDIDLPAEELGIAPKSVKDIDAARLATLSYGHGISATPIQMLTALNSIVNGGMLIEPHVAKEF ISKDTKKVEKVQSKVKRQIISAQTSKQINKMLQGVVDDGSGKKAAIQGFGIGGKTGTSIKIEDGKYTDSKTTASFFGSFP TDHPEYTVLVVVDEPQRKNGGSAVCAPSAGKIFSKIIEYKRMNKTRLDSDDSDKITVPELEGLTLKLAVDKLNSLGLKSK VTNSDSNLNSIVTSQETEAYSKVNKGDIIELTTGSVEDSLIRIPEIVGFTVEDAVDTLKKYGINNIEIKNGKKGKVVKTD PEENKLIDPKSYIKIYTEQ
Specific function: Penicillin-binding protein with an unknown catalytic activity. May have a specialized role in the morphogenesis of spore cortex, which is a modified form of peptidoglycan. Pore cortex formation is determined primarily by the mother cell [H]
COG id: COG0768
COG function: function code M; Cell division protein FtsI/penicillin-binding protein 2
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PASTA domain [H]
Homologues:
Organism=Escherichia coli, GI1786272, Length=626, Percent_Identity=24.7603833865815, Blast_Score=166, Evalue=4e-42, Organism=Escherichia coli, GI1786854, Length=657, Percent_Identity=21.1567732115677, Blast_Score=114, Evalue=3e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR005543 - InterPro: IPR005311 - InterPro: IPR001460 - InterPro: IPR011927 [H]
Pfam domain/function: PF03793 PASTA; PF03717 PBP_dimer; PF00905 Transpeptidase [H]
EC number: NA
Molecular weight: Translated: 82064; Mature: 82064
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: PS00018 EF_HAND_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRRNLSKGKINKNFNKNYNSRIVVLFCILTFIVLLIVGKLIYLQLTPAGDKYRKLSAKQ CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHC STNTINIDAERGKILDTNGETLADNVVSNNLYVNATYLNDQAKSNLVDSLSKSLSMKPEE CCCEEEEECCCCEEECCCCCHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHHCCCCHHH LRKILEKKKTVLVKPSLSKSEIDNIKKLPISNQKFISVVSEKKRYYPNKEMLSQVLGFTN HHHHHHHCCEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCC VNNDGVVGLESFYNSKLKGKPGKRILNSSVNRSIDLSDDSSVIINPENGYDLKTTIDITI CCCCCEEEHHHHHCCCCCCCCHHHHHHHHCCCEEECCCCCEEEECCCCCCEEEEEEEEEE QGFVEDSLKDIENNFKPKSATIIVMNPNNGDVLGMGSYPNFNPNDPKKPLLKEQLDELND EEHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHH LKKENDEDKISKFYFNMWENKATSWTYEPGSVFKTITSAAATEEHTATQHSHYFCNGFIR HHHCCCHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH DIPGVVIRCERYWNPHGDETFQEAFNNSCNIAYVHIGRDLGKANMQKYVNGFGFNQKTDI HCCCEEEEEEECCCCCCCHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCC DLPAEELGIAPKSVKDIDAARLATLSYGHGISATPIQMLTALNSIVNGGMLIEPHVAKEF CCCHHHHCCCCCHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHCCCEEECCHHHHHH ISKDTKKVEKVQSKVKRQIISAQTSKQINKMLQGVVDDGSGKKAAIQGFGIGGKTGTSIK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCEEE IEDGKYTDSKTTASFFGSFPTDHPEYTVLVVVDEPQRKNGGSAVCAPSAGKIFSKIIEYK ECCCCCCCCCHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCEEECCCHHHHHHHHHHHH RMNKTRLDSDDSDKITVPELEGLTLKLAVDKLNSLGLKSKVTNSDSNLNSIVTSQETEAY HCCHHCCCCCCCCEEECCCCCCCEEEEEEHHHHHCCCCCCCCCCCCCHHHHHCCCHHHHH SKVNKGDIIELTTGSVEDSLIRIPEIVGFTVEDAVDTLKKYGINNIEIKNGKKGKVVKTD HHCCCCCEEEEECCCCCHHHHHHHHHHCEEHHHHHHHHHHCCCCEEEECCCCCCCEEECC PEENKLIDPKSYIKIYTEQ CCCCCCCCCHHHEEEEECC >Mature Secondary Structure MRRRNLSKGKINKNFNKNYNSRIVVLFCILTFIVLLIVGKLIYLQLTPAGDKYRKLSAKQ CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHC STNTINIDAERGKILDTNGETLADNVVSNNLYVNATYLNDQAKSNLVDSLSKSLSMKPEE CCCEEEEECCCCEEECCCCCHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHHCCCCHHH LRKILEKKKTVLVKPSLSKSEIDNIKKLPISNQKFISVVSEKKRYYPNKEMLSQVLGFTN HHHHHHHCCEEEECCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCC VNNDGVVGLESFYNSKLKGKPGKRILNSSVNRSIDLSDDSSVIINPENGYDLKTTIDITI CCCCCEEEHHHHHCCCCCCCCHHHHHHHHCCCEEECCCCCEEEECCCCCCEEEEEEEEEE QGFVEDSLKDIENNFKPKSATIIVMNPNNGDVLGMGSYPNFNPNDPKKPLLKEQLDELND EEHHHHHHHHHHHCCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHH LKKENDEDKISKFYFNMWENKATSWTYEPGSVFKTITSAAATEEHTATQHSHYFCNGFIR HHHCCCHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH DIPGVVIRCERYWNPHGDETFQEAFNNSCNIAYVHIGRDLGKANMQKYVNGFGFNQKTDI HCCCEEEEEEECCCCCCCHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCC DLPAEELGIAPKSVKDIDAARLATLSYGHGISATPIQMLTALNSIVNGGMLIEPHVAKEF CCCHHHHCCCCCHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHCCCEEECCHHHHHH ISKDTKKVEKVQSKVKRQIISAQTSKQINKMLQGVVDDGSGKKAAIQGFGIGGKTGTSIK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCEEE IEDGKYTDSKTTASFFGSFPTDHPEYTVLVVVDEPQRKNGGSAVCAPSAGKIFSKIIEYK ECCCCCCCCCHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCEEECCCHHHHHHHHHHHH RMNKTRLDSDDSDKITVPELEGLTLKLAVDKLNSLGLKSKVTNSDSNLNSIVTSQETEAY HCCHHCCCCCCCCEEECCCCCCCEEEEEEHHHHHCCCCCCCCCCCCCHHHHHCCCHHHHH SKVNKGDIIELTTGSVEDSLIRIPEIVGFTVEDAVDTLKKYGINNIEIKNGKKGKVVKTD HHCCCCCEEEEECCCCCHHHHHHHHHHCEEHHHHHHHHHHCCCCEEEECCCCCCCEEECC PEENKLIDPKSYIKIYTEQ CCCCCCCCCHHHEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8289242; 9384377; 8244929; 8436954 [H]