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The map label for this gene is secY [H]

Identifier: 169823872

GI number: 169823872

Start: 188612

End: 189886

Strand: Direct

Name: secY [H]

Synonym: FMG_0175

Alternate gene names: 169823872

Gene position: 188612-189886 (Clockwise)

Preceding gene: 169823871

Following gene: 169823873

Centisome position: 10.49

GC content: 33.49

Gene sequence:

>1275_bases
ATGCTTAAAACCTTGAAAGATTCATGGAAGGTTTTAGACATTCGTAAAAGAATCGGCTTTACTCTACTAATGATTGTAGT
TTTTAGATTAGGTAATACAATACCGGTTCCTTTTATGGATAAGGCCATCATTAAACAAATAATGAGTGGTCAAGAAGGCG
GAATAGTTTCTTTATTGAACCTATTGAGTGGGGGATCATTGAGACAAATGAGCATATTTGCTCTTTCAATCTACCCTTAC
ATTACCGCTTCAATCATTCTTCAACTTTTAACAGTAGCATTTCCTAGATTAGGTGAGCTTACTCGTGAAGGTGAAGAAGG
AAAGAAGAGAATGGGTAAATACACTAAGATCTGTAGTATAATTTTGGCATTCATTCAAGGATATGCTACAGTTAATGGTT
TATTTAACAGAGCAATCGTAGACAAAAGCTTTTTAACAGGATTTGTTATACTAATAAGTTTGGTAGCAGGATCGATGTTT
CTTGTATGGCTAGGAGAAATGATTACTGAAAGAGGTATCGGTAACGGAATTTCAATCTTGATTTTCCTAGGAATCATTTC
AAATATGCCTAGACAAATCGGTACAATGATTTATCAATCTAGACAAGGAATGTTATCTTGGTGGAAAATATCACTTTTCG
TACTAATAGCGATTATAATATTAGTAGTAGTTGTATTAATTAACCAAGGTGAAAGAAGAATTCCTGTACAATACGCTAAA
AGAGTAGTAGGAAGAAAAATGTATGGTGGTCAATCAACTCATATTCCAATCAAGGTTAATATGGGTGGTGTAATGCCAGT
AATCTTTGCATCAGCAATCTTACAATTACCACAAACAATAGCATTATTATTCGGCAAGGACATGCCAGGATGGTTAGCCC
ACATTTTCACAGTACAAACAACATCAGGGTTAGTTATCTTCTCAATAGTAAACATGTTATTGATTATAATATTCGCATTT
TTCTACTCAGCAATTCAATTTAACACTGTTGAATACGCTAAAAACTTGCAACAATATGGCGGATTCATTATGGGAATTAG
ACCTGGTAAACCAACAGGTATGTATCTAAAGAAAATTTCTGATAGAGTAACATTTATAGGCGCAATCATATTAGCAATAG
TTGCATCAGCACCAATGCTAATATCAAAAGCTATAGGAATACAAATCCTATTCGGTGGTACATCAATCATCATCGTAGTA
GGTGTTGTATTAGATACTGTAAAACAAATGGAAAGTATGCTAACTATGAAACACTATAAAGGATTTTTGAAATAA

Upstream 100 bases:

>100_bases
GGAGAAATTACTAAGAAATTAACTATTAAAGCTAATAAATTTACTAAATCAGCTGAAGAAAAAATTACAAAAGCCGGAGG
AAAGGTAGAGGTGATTTAAG

Downstream 100 bases:

>100_bases
GGAGTTTATAATGAGATTAATATTATTAGGACCTCCGGGAGCAGGTAAAGGAACTCAAGCTAAAAGAGTTATTGAAGAAT
TTGATATTCCTCACATTTCA

Product: preprotein translocase subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 424; Mature: 424

Protein sequence:

>424_residues
MLKTLKDSWKVLDIRKRIGFTLLMIVVFRLGNTIPVPFMDKAIIKQIMSGQEGGIVSLLNLLSGGSLRQMSIFALSIYPY
ITASIILQLLTVAFPRLGELTREGEEGKKRMGKYTKICSIILAFIQGYATVNGLFNRAIVDKSFLTGFVILISLVAGSMF
LVWLGEMITERGIGNGISILIFLGIISNMPRQIGTMIYQSRQGMLSWWKISLFVLIAIIILVVVVLINQGERRIPVQYAK
RVVGRKMYGGQSTHIPIKVNMGGVMPVIFASAILQLPQTIALLFGKDMPGWLAHIFTVQTTSGLVIFSIVNMLLIIIFAF
FYSAIQFNTVEYAKNLQQYGGFIMGIRPGKPTGMYLKKISDRVTFIGAIILAIVASAPMLISKAIGIQILFGGTSIIIVV
GVVLDTVKQMESMLTMKHYKGFLK

Sequences:

>Translated_424_residues
MLKTLKDSWKVLDIRKRIGFTLLMIVVFRLGNTIPVPFMDKAIIKQIMSGQEGGIVSLLNLLSGGSLRQMSIFALSIYPY
ITASIILQLLTVAFPRLGELTREGEEGKKRMGKYTKICSIILAFIQGYATVNGLFNRAIVDKSFLTGFVILISLVAGSMF
LVWLGEMITERGIGNGISILIFLGIISNMPRQIGTMIYQSRQGMLSWWKISLFVLIAIIILVVVVLINQGERRIPVQYAK
RVVGRKMYGGQSTHIPIKVNMGGVMPVIFASAILQLPQTIALLFGKDMPGWLAHIFTVQTTSGLVIFSIVNMLLIIIFAF
FYSAIQFNTVEYAKNLQQYGGFIMGIRPGKPTGMYLKKISDRVTFIGAIILAIVASAPMLISKAIGIQILFGGTSIIIVV
GVVLDTVKQMESMLTMKHYKGFLK
>Mature_424_residues
MLKTLKDSWKVLDIRKRIGFTLLMIVVFRLGNTIPVPFMDKAIIKQIMSGQEGGIVSLLNLLSGGSLRQMSIFALSIYPY
ITASIILQLLTVAFPRLGELTREGEEGKKRMGKYTKICSIILAFIQGYATVNGLFNRAIVDKSFLTGFVILISLVAGSMF
LVWLGEMITERGIGNGISILIFLGIISNMPRQIGTMIYQSRQGMLSWWKISLFVLIAIIILVVVVLINQGERRIPVQYAK
RVVGRKMYGGQSTHIPIKVNMGGVMPVIFASAILQLPQTIALLFGKDMPGWLAHIFTVQTTSGLVIFSIVNMLLIIIFAF
FYSAIQFNTVEYAKNLQQYGGFIMGIRPGKPTGMYLKKISDRVTFIGAIILAIVASAPMLISKAIGIQILFGGTSIIIVV
GVVLDTVKQMESMLTMKHYKGFLK

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=418, Percent_Identity=41.6267942583732, Blast_Score=308, Evalue=3e-85,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 46891; Mature: 46891

Theoretical pI: Translated: 10.81; Mature: 10.81

Prosite motif: PS00755 SECY_1 ; PS00756 SECY_2 ; PS00307 LECTIN_LEGUME_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HCCC
>Mature Secondary Structure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HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA