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The map label for this gene is yjkA [H]

Identifier: 169823708

GI number: 169823708

Start: 11130

End: 11903

Strand: Direct

Name: yjkA [H]

Synonym: FMG_0011

Alternate gene names: 169823708

Gene position: 11130-11903 (Clockwise)

Preceding gene: 169823707

Following gene: 169823709

Centisome position: 0.62

GC content: 33.98

Gene sequence:

>774_bases
ATGGGAATAATTAAAATACCATGGACGAGGTTTTTGTTAATTTATCTGCTTTTGTTGTTTGTGTTATTCGTAATGAAAAA
ATGCCGCATAAACAAAGCGAAAACACTGATAATAGCGAGTTTTCGAATGACTGTGCAACTTATTATCGTAGGTTTCATCC
TAACTTATGTTATAAATGCGAACAACAATTTATTTGTAATAATTTACATATTGATAATGGCGACATTCAGCACTTTAAAA
GTATTCAAAGGCAATAATTTATCGGACAAATTCAAGGTGATTATAGGACTTAGTATATTATTTTCGGGAATTCTCGTGGA
GTGTTTCTACGTTGGATTTGTCATCAGAAAACCGATTTTCGATGCACAATACGCGATTCCAATTTCTGGAATGCTTTTCG
GAAATACGATGACGGCTGTGAATTTGGGAGTCAATTACTTAAACGAAAATTTGAAACTGAACAAAAACAAAATCACAACG
CTGATTAATTTGGGAGTAAAGGCAGATACAGCTTTAATTCCAATCGTAAATCAATCCGTAGAAATGGCGATACTACCGAA
TTTGAACAGTATGATTGCGATGGGAATTATAAGTCTTCCTGGAATGATGACAGGACAAATCCTATCCGGAGTTAGCCCGA
ACACTGCGATAATTTATCAGATTTCTGTGATGATTGCAATCTGTGCGAGCGTTAACATTGCAAGTTTCTTGTCGCTTTAT
CTAGGATACAAAAGTTTGATTAACAATAGAGAACAAATAAATTTTGAATTGTAA

Upstream 100 bases:

>100_bases
GATTATTGTAAACACAATGATATTACTCTTGTAGTTGTGAGTCACGCGAGAAATTTGGTGGATGAATTTGCAGACAAAAC
AATAGATTTAGGAGATTGAA

Downstream 100 bases:

>100_bases
TTGGAGGAAAAAATGAGAATTGAAAGGGATTCTATCGGAGAAATCGAAGTAAATGACGATGTGTTGTGGGGAGCACAAAC
TCAAAGAAGTTTCAACAATT

Product: glutamine ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 256

Protein sequence:

>257_residues
MGIIKIPWTRFLLIYLLLLFVLFVMKKCRINKAKTLIIASFRMTVQLIIVGFILTYVINANNNLFVIIYILIMATFSTLK
VFKGNNLSDKFKVIIGLSILFSGILVECFYVGFVIRKPIFDAQYAIPISGMLFGNTMTAVNLGVNYLNENLKLNKNKITT
LINLGVKADTALIPIVNQSVEMAILPNLNSMIAMGIISLPGMMTGQILSGVSPNTAIIYQISVMIAICASVNIASFLSLY
LGYKSLINNREQINFEL

Sequences:

>Translated_257_residues
MGIIKIPWTRFLLIYLLLLFVLFVMKKCRINKAKTLIIASFRMTVQLIIVGFILTYVINANNNLFVIIYILIMATFSTLK
VFKGNNLSDKFKVIIGLSILFSGILVECFYVGFVIRKPIFDAQYAIPISGMLFGNTMTAVNLGVNYLNENLKLNKNKITT
LINLGVKADTALIPIVNQSVEMAILPNLNSMIAMGIISLPGMMTGQILSGVSPNTAIIYQISVMIAICASVNIASFLSLY
LGYKSLINNREQINFEL
>Mature_256_residues
GIIKIPWTRFLLIYLLLLFVLFVMKKCRINKAKTLIIASFRMTVQLIIVGFILTYVINANNNLFVIIYILIMATFSTLKV
FKGNNLSDKFKVIIGLSILFSGILVECFYVGFVIRKPIFDAQYAIPISGMLFGNTMTAVNLGVNYLNENLKLNKNKITTL
INLGVKADTALIPIVNQSVEMAILPNLNSMIAMGIISLPGMMTGQILSGVSPNTAIIYQISVMIAICASVNIASFLSLYL
GYKSLINNREQINFEL

Specific function: Unknown

COG id: COG0390

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0014 family [H]

Homologues:

Organism=Escherichia coli, GI87081746, Length=247, Percent_Identity=27.5303643724696, Blast_Score=103, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005226 [H]

Pfam domain/function: PF03649 UPF0014 [H]

EC number: NA

Molecular weight: Translated: 28566; Mature: 28435

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIIKIPWTRFLLIYLLLLFVLFVMKKCRINKAKTLIIASFRMTVQLIIVGFILTYVINA
CCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEHHHHHHHHHHHHHHHHHHHCCC
NNNLFVIIYILIMATFSTLKVFKGNNLSDKFKVIIGLSILFSGILVECFYVGFVIRKPIF
CCCEEHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DAQYAIPISGMLFGNTMTAVNLGVNYLNENLKLNKNKITTLINLGVKADTALIPIVNQSV
CCCEECCCCCEEECCCHHHHHHHHHHHCCCCEECCHHEEEEEECCCCCCCEEEEEECCCE
EMAILPNLNSMIAMGIISLPGMMTGQILSGVSPNTAIIYQISVMIAICASVNIASFLSLY
EEEECCCCHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEEHHHHHHHHHHCCCHHHHHHHH
LGYKSLINNREQINFEL
HHHHHHHCCCHHEEECC
>Mature Secondary Structure 
GIIKIPWTRFLLIYLLLLFVLFVMKKCRINKAKTLIIASFRMTVQLIIVGFILTYVINA
CEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEHHHHHHHHHHHHHHHHHHHCCC
NNNLFVIIYILIMATFSTLKVFKGNNLSDKFKVIIGLSILFSGILVECFYVGFVIRKPIF
CCCEEHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DAQYAIPISGMLFGNTMTAVNLGVNYLNENLKLNKNKITTLINLGVKADTALIPIVNQSV
CCCEECCCCCEEECCCHHHHHHHHHHHCCCCEECCHHEEEEEECCCCCCCEEEEEECCCE
EMAILPNLNSMIAMGIISLPGMMTGQILSGVSPNTAIIYQISVMIAICASVNIASFLSLY
EEEECCCCHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEEHHHHHHHHHHCCCHHHHHHHH
LGYKSLINNREQINFEL
HHHHHHHCCCHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9579062; 9384377 [H]