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The map label for this gene is 167625971

Identifier: 167625971

GI number: 167625971

Start: 4951931

End: 4953694

Strand: Reverse

Name: 167625971

Synonym: Shal_4066

Alternate gene names: NA

Gene position: 4953694-4951931 (Counterclockwise)

Preceding gene: 167625972

Following gene: 167625970

Centisome position: 94.77

GC content: 40.36

Gene sequence:

>1764_bases
ATGAAATCAGTTCATGGATTCAAGCATCTATACCTTCGTAATAACACCTATTATTTCCGCTTTGTATTGCGCAGACATCG
AATCAAGCATCAATTCTCCCTAAGTCTTAAATCGACAGAGTTTAGCGAAGCCATTGTTTCATGGAAGAAAATAAGTCTCG
AAGTAACTAAGCTAAAAAAGCTTGTGCAGACTTATCAAAAGCATGAAACTGATGAAATTCGCCGCTTAGTTAATGGATTT
AAAATAAGCATGCAAGAAAAGCTCACAATGCATCACATTGACCCTATCATTGCTGAATTAGAGCAATCCTATACCAGTAA
TGTCCATATGCTTAAGGTACTAGGAAGAAATTGCCCAATAGACTTTCCTGAGCGTTTTCATCACATGCTAGCCTCATTAG
GAAATAATGCTTGTGGAATGCCTGTAGGAGAAAAGCTATATGAGGTGATGGATAGCATATCGAATGAGGATATGTCTGCC
TTTCTACAGTATCTAGCAAGTATTCTCATTCGATTTACAGCCTCTGATGAAGACTTCAATGTTGACGGGTTAGCAGAGAC
TGCGAAGGAGATTTTAGCTAAGCATAACCTCTGTTTTGATGAGCAATCTCTAGAGTTTCAAGTATTGCTTAGTAAGCTTA
GAACTTCATCTCAGATTCGAAACACATTGATTGAAACCGTTGTTTGTGAAGATGGAGTTAAAGAGCGTGAATTAACTCAA
TTACTTCAAACTCCCACGGTTGTAGCGAGTGAAGCTAAAACTAAAATAGATGTAGTTAGTAGTGCTCCACATTTTTCGGC
AGTTTATGCTGAATTTTTACAGCATAAAATTAAGAAAGAGAAATTAGCTGACAAGGTACAGCAAGACTACGCTAGAAAGT
ATGTGGTGTGGCAATCCCTGACTGAAGATAAGCCTATTGACCTTTATTCTCCTAAAGATATTGGACGATTTATTGATCGC
TGCTTTGAACTTCCGAAGATGAATATTGCACCGTATAGCAAGATGTCTTGGGCTGAGCGTTTAGAAGTCGATGTGCCTGA
AGAGGATATGATCTCTCCTAAATCGGTCAGCCACTTCTATAAATGGCTGCAAGGAGTATTTGCCTACGCTAAGCGTGACA
CTATCGGTTATATCAACGCTTCACCTTGTTCGATTAAGCGCGAGTACAAATCAAGAACTCGTGGCGTATTTGACGATATC
GAACTGCAAGTCTTCCTAAAGGCTGCTGATGACGAAAAGCAGGTTTGGCGAAAGTGGATGATCTATCTTGGCATCTATAC
CGGAGCAAGACGTGGTGAGTTGGTTCAGCTACGTAAAGAAGACGTTAAGTTTGATACGGCAACCAAACGCCATTACCTGC
TAATTACTGATGAGCATGAGAGCCAAAAGCTTAAAACAGAGAATGCCAAGCGGAAGATCCCGTTACACATGGATTTGATT
AATGCTGGCTTTATCGAGTACGTCGAATCCTGTAAGGAGAGGGTATTCGATAGGGTTAATAATCGTGAGGTGGTGACGGC
ATGGTTTGCAAGGCAGATGCAGAATATTGAAATCAATTCGATTAATGAGCTGGGACATATCCGCTCGTTCCATAGCTTTC
GTCATACCTTCATTACCAAACTGATGAACGAAGGTGTACAGGTGAACTTACTCCAACAGGTAGTAGGTCATGAGATTAGT
TCATTTGGAATCACTAGCAACTACACCCACAAGTCGACTGAACTTAAACATGTGTTGCCAGTAGTAGACCTGTTATTTGT
ATAG

Upstream 100 bases:

>100_bases
CTCACCTGTTACACGGTGTGTTACACCTCTTGTTACACGCTTTTCAAAATCTTATTCAAAGAACACTTCAGAATCTCCGT
TATATCTTGAGGTGCTTATC

Downstream 100 bases:

>100_bases
GCTTGAATTATTTTCTTTTGATAATAGCTTTTTATTGAATATCGATGAAAGATTGAGGTTTTTTGTGATAAAAAAAGCTT
TAGATATGTTTGAAGGTAAG

Product: integrase family protein

Products: NA

Alternate protein names: Integrase; Phage Integrase; Phage-Related Integrase; Phage Integrase Family Site Specific Recombinase; Phage Integerase; Site-Specific Recombinase; Phage Integrase Family Protein; Integrase/Resolvase Recombinase Protein

Number of amino acids: Translated: 587; Mature: 587

Protein sequence:

>587_residues
MKSVHGFKHLYLRNNTYYFRFVLRRHRIKHQFSLSLKSTEFSEAIVSWKKISLEVTKLKKLVQTYQKHETDEIRRLVNGF
KISMQEKLTMHHIDPIIAELEQSYTSNVHMLKVLGRNCPIDFPERFHHMLASLGNNACGMPVGEKLYEVMDSISNEDMSA
FLQYLASILIRFTASDEDFNVDGLAETAKEILAKHNLCFDEQSLEFQVLLSKLRTSSQIRNTLIETVVCEDGVKERELTQ
LLQTPTVVASEAKTKIDVVSSAPHFSAVYAEFLQHKIKKEKLADKVQQDYARKYVVWQSLTEDKPIDLYSPKDIGRFIDR
CFELPKMNIAPYSKMSWAERLEVDVPEEDMISPKSVSHFYKWLQGVFAYAKRDTIGYINASPCSIKREYKSRTRGVFDDI
ELQVFLKAADDEKQVWRKWMIYLGIYTGARRGELVQLRKEDVKFDTATKRHYLLITDEHESQKLKTENAKRKIPLHMDLI
NAGFIEYVESCKERVFDRVNNREVVTAWFARQMQNIEINSINELGHIRSFHSFRHTFITKLMNEGVQVNLLQQVVGHEIS
SFGITSNYTHKSTELKHVLPVVDLLFV

Sequences:

>Translated_587_residues
MKSVHGFKHLYLRNNTYYFRFVLRRHRIKHQFSLSLKSTEFSEAIVSWKKISLEVTKLKKLVQTYQKHETDEIRRLVNGF
KISMQEKLTMHHIDPIIAELEQSYTSNVHMLKVLGRNCPIDFPERFHHMLASLGNNACGMPVGEKLYEVMDSISNEDMSA
FLQYLASILIRFTASDEDFNVDGLAETAKEILAKHNLCFDEQSLEFQVLLSKLRTSSQIRNTLIETVVCEDGVKERELTQ
LLQTPTVVASEAKTKIDVVSSAPHFSAVYAEFLQHKIKKEKLADKVQQDYARKYVVWQSLTEDKPIDLYSPKDIGRFIDR
CFELPKMNIAPYSKMSWAERLEVDVPEEDMISPKSVSHFYKWLQGVFAYAKRDTIGYINASPCSIKREYKSRTRGVFDDI
ELQVFLKAADDEKQVWRKWMIYLGIYTGARRGELVQLRKEDVKFDTATKRHYLLITDEHESQKLKTENAKRKIPLHMDLI
NAGFIEYVESCKERVFDRVNNREVVTAWFARQMQNIEINSINELGHIRSFHSFRHTFITKLMNEGVQVNLLQQVVGHEIS
SFGITSNYTHKSTELKHVLPVVDLLFV
>Mature_587_residues
MKSVHGFKHLYLRNNTYYFRFVLRRHRIKHQFSLSLKSTEFSEAIVSWKKISLEVTKLKKLVQTYQKHETDEIRRLVNGF
KISMQEKLTMHHIDPIIAELEQSYTSNVHMLKVLGRNCPIDFPERFHHMLASLGNNACGMPVGEKLYEVMDSISNEDMSA
FLQYLASILIRFTASDEDFNVDGLAETAKEILAKHNLCFDEQSLEFQVLLSKLRTSSQIRNTLIETVVCEDGVKERELTQ
LLQTPTVVASEAKTKIDVVSSAPHFSAVYAEFLQHKIKKEKLADKVQQDYARKYVVWQSLTEDKPIDLYSPKDIGRFIDR
CFELPKMNIAPYSKMSWAERLEVDVPEEDMISPKSVSHFYKWLQGVFAYAKRDTIGYINASPCSIKREYKSRTRGVFDDI
ELQVFLKAADDEKQVWRKWMIYLGIYTGARRGELVQLRKEDVKFDTATKRHYLLITDEHESQKLKTENAKRKIPLHMDLI
NAGFIEYVESCKERVFDRVNNREVVTAWFARQMQNIEINSINELGHIRSFHSFRHTFITKLMNEGVQVNLLQQVVGHEIS
SFGITSNYTHKSTELKHVLPVVDLLFV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68398; Mature: 68398

Theoretical pI: Translated: 8.57; Mature: 8.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSVHGFKHLYLRNNTYYFRFVLRRHRIKHQFSLSLKSTEFSEAIVSWKKISLEVTKLKK
CCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHH
LVQTYQKHETDEIRRLVNGFKISMQEKLTMHHIDPIIAELEQSYTSNVHMLKVLGRNCPI
HHHHHHHCCHHHHHHHHHHHHEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCC
DFPERFHHMLASLGNNACGMPVGEKLYEVMDSISNEDMSAFLQYLASILIRFTASDEDFN
CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCC
VDGLAETAKEILAKHNLCFDEQSLEFQVLLSKLRTSSQIRNTLIETVVCEDGVKERELTQ
CCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
LLQTPTVVASEAKTKIDVVSSAPHFSAVYAEFLQHKIKKEKLADKVQQDYARKYVVWQSL
HHHCCHHHHHCCHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TEDKPIDLYSPKDIGRFIDRCFELPKMNIAPYSKMSWAERLEVDVPEEDMISPKSVSHFY
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCHHHCCCHHHHHHHH
KWLQGVFAYAKRDTIGYINASPCSIKREYKSRTRGVFDDIELQVFLKAADDEKQVWRKWM
HHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHH
IYLGIYTGARRGELVQLRKEDVKFDTATKRHYLLITDEHESQKLKTENAKRKIPLHMDLI
HHHHHHCCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHCCCCCCCCEEHHHH
NAGFIEYVESCKERVFDRVNNREVVTAWFARQMQNIEINSINELGHIRSFHSFRHTFITK
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
LMNEGVQVNLLQQVVGHEISSFGITSNYTHKSTELKHVLPVVDLLFV
HHHCCCCHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKSVHGFKHLYLRNNTYYFRFVLRRHRIKHQFSLSLKSTEFSEAIVSWKKISLEVTKLKK
CCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHH
LVQTYQKHETDEIRRLVNGFKISMQEKLTMHHIDPIIAELEQSYTSNVHMLKVLGRNCPI
HHHHHHHCCHHHHHHHHHHHHEHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCC
DFPERFHHMLASLGNNACGMPVGEKLYEVMDSISNEDMSAFLQYLASILIRFTASDEDFN
CCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCC
VDGLAETAKEILAKHNLCFDEQSLEFQVLLSKLRTSSQIRNTLIETVVCEDGVKERELTQ
CCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
LLQTPTVVASEAKTKIDVVSSAPHFSAVYAEFLQHKIKKEKLADKVQQDYARKYVVWQSL
HHHCCHHHHHCCHHHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TEDKPIDLYSPKDIGRFIDRCFELPKMNIAPYSKMSWAERLEVDVPEEDMISPKSVSHFY
CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCHHHCCCHHHHHHHH
KWLQGVFAYAKRDTIGYINASPCSIKREYKSRTRGVFDDIELQVFLKAADDEKQVWRKWM
HHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHH
IYLGIYTGARRGELVQLRKEDVKFDTATKRHYLLITDEHESQKLKTENAKRKIPLHMDLI
HHHHHHCCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHCCCCCCCCEEHHHH
NAGFIEYVESCKERVFDRVNNREVVTAWFARQMQNIEINSINELGHIRSFHSFRHTFITK
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
LMNEGVQVNLLQQVVGHEISSFGITSNYTHKSTELKHVLPVVDLLFV
HHHCCCCHHHHHHHHCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA