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The map label for this gene is rsmI [H]

Identifier: 167625972

GI number: 167625972

Start: 4954297

End: 4955139

Strand: Reverse

Name: rsmI [H]

Synonym: Shal_4067

Alternate gene names: 167625972

Gene position: 4955139-4954297 (Counterclockwise)

Preceding gene: 167625977

Following gene: 167625971

Centisome position: 94.8

GC content: 46.74

Gene sequence:

>843_bases
ATGGACCTGTCGGTCGCGCTTTACATTGTTCCCACACCAATTGGGAATCTAGGGGACATCAGTAGCCGTGCAATAGAGGT
ACTTAATCAAGTATCGCTTATCGCCTGTGAAGACACCCGTCATAGTGGAAAATTGCTGAGTCACTTCGGTATCGAGACCC
GTAAAACGGCTTTGCACGATCATAATGAACGTGACCGAGCGCAGTGGATCATTCAAAAACTGGGTAATGGCGAAGCAGTT
GCTTTGATCTCTGATGCGGGCACACCGCTGATCTCAGATCCTGGCTACCACTTAGTTAAGCAAGTGCGTGAAGCGGGCTT
TAATGTGATCCCACTACCAGGCCCATGTGCTGCGATTACGGCATTAAGTGCTTCAGGTTTACCCTCTGATCGTTTCACGT
TTGAAGGTTTCTTGCCGTCAAAAGAGAAAGCTCGATTTGATAAGCTGACTGCACTGAAAGATGATCCTCGTACGTTAATC
TTTTATGAGTCACCGCATCGTATCGTTCACAGCCTAGAATCACTCGTTGAGGCGTTAGGCGCAGATCGTGAAATTGTGAT
GGCTCGAGAAGTCACTAAAACCTTTGAGACTTTCTTATCTGGCCCCGCAGGTGAAGTACTGCAAACCGTTAAAGATGATC
CTAATCAGCAGCGCGGTGAAATCGTGTTGATGTGTCATGGTCATCGCAGCGACGAAGAATCAGAGTTTTCGCCTACGGTG
ATTAATACGCTTAAATTGTTGTGTGAAGAGCTGCCACTGAAAAAAGCTGCGGCGGTTGCAGGGCAGATTTACGACATTAA
AAAGAACGCACTTTATAAGCACGGATTATCTATAGGGCTTTAA

Upstream 100 bases:

>100_bases
GTCTTCACTCTGGTAAGATGCTGCTAATAGTTTAACCTGCTCTTCCGCTTGGCGAAAGTATTGTTAGAAACTCTTGCCAA
CACTCAATACAGAGGTAGTT

Downstream 100 bases:

>100_bases
CTTTTAGCGATAGATCGCTAATAGATTCACCCTTGAGTTAAGCTGATTTGTGAAAGTCCTTGGTTTGTTGCTTGAGCTTA
GGCTATAATCCGCGCCGAGT

Product: uroporphyrin-III C/tetrapyrrole methyltransferase

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MDLSVALYIVPTPIGNLGDISSRAIEVLNQVSLIACEDTRHSGKLLSHFGIETRKTALHDHNERDRAQWIIQKLGNGEAV
ALISDAGTPLISDPGYHLVKQVREAGFNVIPLPGPCAAITALSASGLPSDRFTFEGFLPSKEKARFDKLTALKDDPRTLI
FYESPHRIVHSLESLVEALGADREIVMAREVTKTFETFLSGPAGEVLQTVKDDPNQQRGEIVLMCHGHRSDEESEFSPTV
INTLKLLCEELPLKKAAAVAGQIYDIKKNALYKHGLSIGL

Sequences:

>Translated_280_residues
MDLSVALYIVPTPIGNLGDISSRAIEVLNQVSLIACEDTRHSGKLLSHFGIETRKTALHDHNERDRAQWIIQKLGNGEAV
ALISDAGTPLISDPGYHLVKQVREAGFNVIPLPGPCAAITALSASGLPSDRFTFEGFLPSKEKARFDKLTALKDDPRTLI
FYESPHRIVHSLESLVEALGADREIVMAREVTKTFETFLSGPAGEVLQTVKDDPNQQRGEIVLMCHGHRSDEESEFSPTV
INTLKLLCEELPLKKAAAVAGQIYDIKKNALYKHGLSIGL
>Mature_280_residues
MDLSVALYIVPTPIGNLGDISSRAIEVLNQVSLIACEDTRHSGKLLSHFGIETRKTALHDHNERDRAQWIIQKLGNGEAV
ALISDAGTPLISDPGYHLVKQVREAGFNVIPLPGPCAAITALSASGLPSDRFTFEGFLPSKEKARFDKLTALKDDPRTLI
FYESPHRIVHSLESLVEALGADREIVMAREVTKTFETFLSGPAGEVLQTVKDDPNQQRGEIVLMCHGHRSDEESEFSPTV
INTLKLLCEELPLKKAAAVAGQIYDIKKNALYKHGLSIGL

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=270, Percent_Identity=61.4814814814815, Blast_Score=330, Evalue=5e-92,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 30642; Mature: 30642

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: PS01296 UPF0011

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLSVALYIVPTPIGNLGDISSRAIEVLNQVSLIACEDTRHSGKLLSHFGIETRKTALHD
CCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHEEEECCCCCCCHHHHHCCCCHHHHHHHC
HNERDRAQWIIQKLGNGEAVALISDAGTPLISDPGYHLVKQVREAGFNVIPLPGPCAAIT
CCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEECCCCHHHHH
ALSASGLPSDRFTFEGFLPSKEKARFDKLTALKDDPRTLIFYESPHRIVHSLESLVEALG
HHHCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHC
ADREIVMAREVTKTFETFLSGPAGEVLQTVKDDPNQQRGEIVLMCHGHRSDEESEFSPTV
CCCEEHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCHH
INTLKLLCEELPLKKAAAVAGQIYDIKKNALYKHGLSIGL
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MDLSVALYIVPTPIGNLGDISSRAIEVLNQVSLIACEDTRHSGKLLSHFGIETRKTALHD
CCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHEEEECCCCCCCHHHHHCCCCHHHHHHHC
HNERDRAQWIIQKLGNGEAVALISDAGTPLISDPGYHLVKQVREAGFNVIPLPGPCAAIT
CCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEECCCCHHHHH
ALSASGLPSDRFTFEGFLPSKEKARFDKLTALKDDPRTLIFYESPHRIVHSLESLVEALG
HHHCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHC
ADREIVMAREVTKTFETFLSGPAGEVLQTVKDDPNQQRGEIVLMCHGHRSDEESEFSPTV
CCCEEHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCHH
INTLKLLCEELPLKKAAAVAGQIYDIKKNALYKHGLSIGL
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]