| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is yeiG [H]
Identifier: 167625937
GI number: 167625937
Start: 4912818
End: 4913657
Strand: Reverse
Name: yeiG [H]
Synonym: Shal_4032
Alternate gene names: 167625937
Gene position: 4913657-4912818 (Counterclockwise)
Preceding gene: 167625938
Following gene: 167625936
Centisome position: 94.01
GC content: 47.86
Gene sequence:
>840_bases ATGACCGTTGAAAATATCAGTGTAAATAAGAGCTTTGGTGGCTGGCATAAACAATATAGCCATCATTCGAAGACACTTAA TTGCGCCATGCGATTTGCCATTTACTTACCGCCTCAAGCGTCAAATGGTGAAAAGGTGCCGGTGCTTTATTGGCTATCTG GCTTAACCTGTACCGACGAAAACTTTATGCAAAAAGCTGGCGCTCAGCGCATGGCTGCAGAACTTGGCATCGCGATTGTT GCGCCTGATACCAGCCCTCGAGGCGACGATGTTGCCGATGATACTGGCTACGATCTCGGTAAGGGTGCAGGTTTCTATGT TAACGCCACTCAAGCACCTTGGAATCGTCATTATAGAATGTATGACTATGTGGTAAATGAATTGCCGCGGCTGATAGAGT CGATGTTCCCCGTCAGCGATAAGCGCTCAATTGCGGGTCACTCTATGGGCGGGCATGGCGCACTCGTTATTGCGATGCGT AACCCACAGGTGTATCAGTCAGTGTCGGCATTTAGTCCGATTACTAATCCAGTCAACTGCCCTTGGGGTAAAAAGGCATT CACCGCTTATTTAGGCCGTGATACCACTACATGGACTGACTACGATGCTAGCCTGTTGATGCGTCAAGCGACTGAGTTTG TGCCAGCGCTAGTAGATCAGGGAGAGGCTGATGACTTCCTTGTTGAGCAATTAAAGCCAGAGGTGTTAGAAGCTGCTGCC AAGTTAAGTGGCTATCCACTGACGCTCAATATGCAAGAAGGCTTCGATCATAGCTATTACTTCATCTCTAGCTTTATTGA AAGCCACCTGCGCTTTCATGCAGAGCACTTGGCTAAATAA
Upstream 100 bases:
>100_bases TTTTTAAAGATTGAACATCTATTGGTTTAGCTTTTAAAGATTGGGCTTTAAAGATTAACCTTTCAAAATTAAGTAAAAAA TTTATAGGAGTCGGTATTAA
Downstream 100 bases:
>100_bases AGTGATCAGCCGTTTTTTAAATGAGTGAAGTCATTCGTTAGATTACTTCGTTTGATGACTCTCAGTTTGCCAAATAGCCG CCATGTAGGGCGGCTTTTTG
Product: S-formylglutathione hydrolase
Products: NA
Alternate protein names: FGH [H]
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MTVENISVNKSFGGWHKQYSHHSKTLNCAMRFAIYLPPQASNGEKVPVLYWLSGLTCTDENFMQKAGAQRMAAELGIAIV APDTSPRGDDVADDTGYDLGKGAGFYVNATQAPWNRHYRMYDYVVNELPRLIESMFPVSDKRSIAGHSMGGHGALVIAMR NPQVYQSVSAFSPITNPVNCPWGKKAFTAYLGRDTTTWTDYDASLLMRQATEFVPALVDQGEADDFLVEQLKPEVLEAAA KLSGYPLTLNMQEGFDHSYYFISSFIESHLRFHAEHLAK
Sequences:
>Translated_279_residues MTVENISVNKSFGGWHKQYSHHSKTLNCAMRFAIYLPPQASNGEKVPVLYWLSGLTCTDENFMQKAGAQRMAAELGIAIV APDTSPRGDDVADDTGYDLGKGAGFYVNATQAPWNRHYRMYDYVVNELPRLIESMFPVSDKRSIAGHSMGGHGALVIAMR NPQVYQSVSAFSPITNPVNCPWGKKAFTAYLGRDTTTWTDYDASLLMRQATEFVPALVDQGEADDFLVEQLKPEVLEAAA KLSGYPLTLNMQEGFDHSYYFISSFIESHLRFHAEHLAK >Mature_278_residues TVENISVNKSFGGWHKQYSHHSKTLNCAMRFAIYLPPQASNGEKVPVLYWLSGLTCTDENFMQKAGAQRMAAELGIAIVA PDTSPRGDDVADDTGYDLGKGAGFYVNATQAPWNRHYRMYDYVVNELPRLIESMFPVSDKRSIAGHSMGGHGALVIAMRN PQVYQSVSAFSPITNPVNCPWGKKAFTAYLGRDTTTWTDYDASLLMRQATEFVPALVDQGEADDFLVEQLKPEVLEAAAK LSGYPLTLNMQEGFDHSYYFISSFIESHLRFHAEHLAK
Specific function: Serine hydrolase involved in the detoxification of formaldehyde. Hydrolyzes S-formylglutathione to glutathione and formate [H]
COG id: COG0627
COG function: function code R; Predicted esterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the esterase D family [H]
Homologues:
Organism=Homo sapiens, GI33413400, Length=281, Percent_Identity=53.7366548042705, Blast_Score=318, Evalue=5e-87, Organism=Escherichia coli, GI1788477, Length=279, Percent_Identity=58.4229390681004, Blast_Score=349, Evalue=9e-98, Organism=Escherichia coli, GI1786551, Length=275, Percent_Identity=55.6363636363636, Blast_Score=328, Evalue=3e-91, Organism=Caenorhabditis elegans, GI17510185, Length=284, Percent_Identity=49.2957746478873, Blast_Score=266, Evalue=1e-71, Organism=Saccharomyces cerevisiae, GI6322393, Length=287, Percent_Identity=42.8571428571429, Blast_Score=229, Evalue=5e-61, Organism=Drosophila melanogaster, GI45551932, Length=283, Percent_Identity=51.5901060070671, Blast_Score=291, Evalue=3e-79, Organism=Drosophila melanogaster, GI24648347, Length=283, Percent_Identity=51.5901060070671, Blast_Score=291, Evalue=4e-79,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000801 - InterPro: IPR014186 [H]
Pfam domain/function: PF00756 Esterase [H]
EC number: =3.1.2.12 [H]
Molecular weight: Translated: 31075; Mature: 30944
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVENISVNKSFGGWHKQYSHHSKTLNCAMRFAIYLPPQASNGEKVPVLYWLSGLTCTDE CCCCCEECCCCCCCHHHHHHHHHHHHHEEEEEEEEECCCCCCCCCCEEEEEECCCEECCH NFMQKAGAQRMAAELGIAIVAPDTSPRGDDVADDTGYDLGKGAGFYVNATQAPWNRHYRM HHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHCHHH YDYVVNELPRLIESMFPVSDKRSIAGHSMGGHGALVIAMRNPQVYQSVSAFSPITNPVNC HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCC PWGKKAFTAYLGRDTTTWTDYDASLLMRQATEFVPALVDQGEADDFLVEQLKPEVLEAAA CCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCHHHHHHHH KLSGYPLTLNMQEGFDHSYYFISSFIESHLRFHAEHLAK HHCCCCEEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TVENISVNKSFGGWHKQYSHHSKTLNCAMRFAIYLPPQASNGEKVPVLYWLSGLTCTDE CCCCEECCCCCCCHHHHHHHHHHHHHEEEEEEEEECCCCCCCCCCEEEEEECCCEECCH NFMQKAGAQRMAAELGIAIVAPDTSPRGDDVADDTGYDLGKGAGFYVNATQAPWNRHYRM HHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHCHHH YDYVVNELPRLIESMFPVSDKRSIAGHSMGGHGALVIAMRNPQVYQSVSAFSPITNPVNC HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCC PWGKKAFTAYLGRDTTTWTDYDASLLMRQATEFVPALVDQGEADDFLVEQLKPEVLEAAA CCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCHHHHHHHH KLSGYPLTLNMQEGFDHSYYFISSFIESHLRFHAEHLAK HHCCCCEEEEHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA