| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is yecN [H]
Identifier: 167625932
GI number: 167625932
Start: 4907916
End: 4908323
Strand: Reverse
Name: yecN [H]
Synonym: Shal_4027
Alternate gene names: 167625932
Gene position: 4908323-4907916 (Counterclockwise)
Preceding gene: 167625935
Following gene: 167625931
Centisome position: 93.9
GC content: 46.57
Gene sequence:
>408_bases ATGCCGCTTGCAATATCTGGGCTGTATATCAGTCTTACTGCACTGCTTACTGTTGTGCTCGCTTTTCGAGTGATTAAGCT CAGGCGAACCCATAAAATAGGCATCGGAAGTGCGGGGAATGAATCGTTGGAGTTGGCGCAAAGAGTGCACGCTAATTTAT TAGAGAATGCCCCCATTGCTTTACTATTGTTTGTGACGGCAGAAATGAATGGTGCGAAAGCTGAGCTTTTGTATCTGTTT GGTACGGTATGGATTGTTGCGCGCTTATTACATGCGATTGGGTTAACTCAAGGACAGGGCGGTTATCATTTCGGCCGTTT CTGGGGGGTATTGCTAACGTGGGGGGGTCATACTGGGCTTGGCGGCAGTCAATCTATTTTACTTTGCAATGACCCTTTAG TTGGTTAA
Upstream 100 bases:
>100_bases TTGAGCTAAAAAAGTTGCCATTTATTTACATAATGTTCTGTAATTGTAATTTCGTGGTGTTAATGACAAAACAGAAGATC CAAAATCAATAGGAGATCCA
Downstream 100 bases:
>100_bases TGCATGCAGAGAGTGAGCGTTGGTAACTTGGGTGCTATAAATGCTTGAAATCCCAGCCCACTGATACCCGCAGCCAAATT GTGGAATAGCAGGCTATACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MPLAISGLYISLTALLTVVLAFRVIKLRRTHKIGIGSAGNESLELAQRVHANLLENAPIALLLFVTAEMNGAKAELLYLF GTVWIVARLLHAIGLTQGQGGYHFGRFWGVLLTWGGHTGLGGSQSILLCNDPLVG
Sequences:
>Translated_135_residues MPLAISGLYISLTALLTVVLAFRVIKLRRTHKIGIGSAGNESLELAQRVHANLLENAPIALLLFVTAEMNGAKAELLYLF GTVWIVARLLHAIGLTQGQGGYHFGRFWGVLLTWGGHTGLGGSQSILLCNDPLVG >Mature_134_residues PLAISGLYISLTALLTVVLAFRVIKLRRTHKIGIGSAGNESLELAQRVHANLLENAPIALLLFVTAEMNGAKAELLYLFG TVWIVARLLHAIGLTQGQGGYHFGRFWGVLLTWGGHTGLGGSQSILLCNDPLVG
Specific function: Unknown
COG id: COG3788
COG function: function code R; Uncharacterized relative of glutathione S-transferase, MAPEG superfamily
Gene ontology:
Cell location: Cell inner membrane [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081993, Length=91, Percent_Identity=37.3626373626374, Blast_Score=69, Evalue=9e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001129 [H]
Pfam domain/function: PF01124 MAPEG [H]
EC number: NA
Molecular weight: Translated: 14445; Mature: 14314
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLAISGLYISLTALLTVVLAFRVIKLRRTHKIGIGSAGNESLELAQRVHANLLENAPIA CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEE LLLFVTAEMNGAKAELLYLFGTVWIVARLLHAIGLTQGQGGYHFGRFWGVLLTWGGHTGL EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCC GGSQSILLCNDPLVG CCCCEEEEECCCCCC >Mature Secondary Structure PLAISGLYISLTALLTVVLAFRVIKLRRTHKIGIGSAGNESLELAQRVHANLLENAPIA CEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEE LLLFVTAEMNGAKAELLYLFGTVWIVARLLHAIGLTQGQGGYHFGRFWGVLLTWGGHTGL EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCC GGSQSILLCNDPLVG CCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]