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The map label for this gene is 167625879

Identifier: 167625879

GI number: 167625879

Start: 4845569

End: 4846474

Strand: Reverse

Name: 167625879

Synonym: Shal_3974

Alternate gene names: NA

Gene position: 4846474-4845569 (Counterclockwise)

Preceding gene: 167625880

Following gene: 167625878

Centisome position: 92.72

GC content: 47.35

Gene sequence:

>906_bases
ATGCTTAAAATTACTTCTATTTTGACAGCACTTTCGGTGCTGTTTTTCTTTTCTCCTGTTCAGGCTAAGTCTGAATCTGA
GTCGATTGAACGAGAGCCACAAAAAGCACGTTACGACAGAACCTTCCCTATCTGGGCCCAAGAAGCGATCGACTTGGGCC
ATGAGCTGCCCAAGCCTTACGGCTTTACGCTGAACTACATGCAGATGGATCAACCCTTAGTCGTCGACTCGGTAGGCTTC
TCTGGGCTGGGTGGGTTAGATGACATTTTAAGTATTAAAGGCAGCAAAGCTAAACAGACGTCTGAAACCTTGACCCTGAG
AGGTGATATGTGGGTGCTGCCCTTTTTAAACCTCTATGGCGTTATCGGTCATACCAAGGGCAGTAGTGTTGCAAACGTAA
AGTTGGAGGCTGACTTAACCGAGGTCTTACCGCCACTATTTTGCAAGTTTAACCCTTGTACCGCTACTAGTCCGGCATTC
GACTTTGTGTTGGATTTTAAGGGCACCACTTATGGGGTCGGCGGCACCATCGTTGGTGGTATCGATAATTGGTTTGCTTT
ATTGGATGTCAACTACACCAATACTCGCCTGAATATTCTCGACGGTGAGATCAGCTCCATTGTGGTGTCGCCGCGTGCGG
GTTATCGCACCAAGTACAACAATCACGATGTTCAAGTTTGGGTTGGCGCCATGTATCAAAATGTGGAGCAGACCTTCAGC
GGCTATCTGCGTGATATCGGCATCCCTTTAGGGGATGCAAAGTTTGAGGTTAACCAGCATCTTGAAGATAAGTGGAACGG
CTTAATCGGCAGTCAGGTTGGACTAACTAAGAATTTCGATCTGTTAATGGAGTTCGGGGTTGGTACGCGTAGCAGCTTTA
TGCTGGGACTAGGCTACCGATTTTAA

Upstream 100 bases:

>100_bases
AATAATTAACCTAAGTTATTTATCTCCTGCCAGAGTGTTCAGCGATAAACTCTTTTTTATATTCGACATAAAATCTTTTA
TTTTAAGGTTCAATCTATAC

Downstream 100 bases:

>100_bases
CGACATCTTATAAATAAATCTTGGAGGGAGTATGCGCCATATTTATCTATTGTTACTGACGCTATTTATCAGTGGCTGCT
CTGCCGTCGATATCATCGAC

Product: virulence-like outer membrane protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MLKITSILTALSVLFFFSPVQAKSESESIEREPQKARYDRTFPIWAQEAIDLGHELPKPYGFTLNYMQMDQPLVVDSVGF
SGLGGLDDILSIKGSKAKQTSETLTLRGDMWVLPFLNLYGVIGHTKGSSVANVKLEADLTEVLPPLFCKFNPCTATSPAF
DFVLDFKGTTYGVGGTIVGGIDNWFALLDVNYTNTRLNILDGEISSIVVSPRAGYRTKYNNHDVQVWVGAMYQNVEQTFS
GYLRDIGIPLGDAKFEVNQHLEDKWNGLIGSQVGLTKNFDLLMEFGVGTRSSFMLGLGYRF

Sequences:

>Translated_301_residues
MLKITSILTALSVLFFFSPVQAKSESESIEREPQKARYDRTFPIWAQEAIDLGHELPKPYGFTLNYMQMDQPLVVDSVGF
SGLGGLDDILSIKGSKAKQTSETLTLRGDMWVLPFLNLYGVIGHTKGSSVANVKLEADLTEVLPPLFCKFNPCTATSPAF
DFVLDFKGTTYGVGGTIVGGIDNWFALLDVNYTNTRLNILDGEISSIVVSPRAGYRTKYNNHDVQVWVGAMYQNVEQTFS
GYLRDIGIPLGDAKFEVNQHLEDKWNGLIGSQVGLTKNFDLLMEFGVGTRSSFMLGLGYRF
>Mature_301_residues
MLKITSILTALSVLFFFSPVQAKSESESIEREPQKARYDRTFPIWAQEAIDLGHELPKPYGFTLNYMQMDQPLVVDSVGF
SGLGGLDDILSIKGSKAKQTSETLTLRGDMWVLPFLNLYGVIGHTKGSSVANVKLEADLTEVLPPLFCKFNPCTATSPAF
DFVLDFKGTTYGVGGTIVGGIDNWFALLDVNYTNTRLNILDGEISSIVVSPRAGYRTKYNNHDVQVWVGAMYQNVEQTFS
GYLRDIGIPLGDAKFEVNQHLEDKWNGLIGSQVGLTKNFDLLMEFGVGTRSSFMLGLGYRF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33342; Mature: 33342

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: PS00695 ENT_VIR_OMP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKITSILTALSVLFFFSPVQAKSESESIEREPQKARYDRTFPIWAQEAIDLGHELPKPY
CEEHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHCCCCC
GFTLNYMQMDQPLVVDSVGFSGLGGLDDILSIKGSKAKQTSETLTLRGDMWVLPFLNLYG
CCEEEEEECCCCEEEECCCCCCCCCHHHHHHCCCCCCCCCCCEEEEECCEEEHHHHHHHH
VIGHTKGSSVANVKLEADLTEVLPPLFCKFNPCTATSPAFDFVLDFKGTTYGVGGTIVGG
HHCCCCCCCEEEEEEECCHHHHCCHHHCCCCCCCCCCCCEEEEEECCCCEEECCCEEECC
IDNWFALLDVNYTNTRLNILDGEISSIVVSPRAGYRTKYNNHDVQVWVGAMYQNVEQTFS
CCCEEEEEEECCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCEEEEHHHHHHHHHHHHH
GYLRDIGIPLGDAKFEVNQHLEDKWNGLIGSQVGLTKNFDLLMEFGVGTRSSFMLGLGYR
HHHHHCCCCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCHHHHEEECCCCCCCEEEECCCC
F
C
>Mature Secondary Structure
MLKITSILTALSVLFFFSPVQAKSESESIEREPQKARYDRTFPIWAQEAIDLGHELPKPY
CEEHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHCCCCC
GFTLNYMQMDQPLVVDSVGFSGLGGLDDILSIKGSKAKQTSETLTLRGDMWVLPFLNLYG
CCEEEEEECCCCEEEECCCCCCCCCHHHHHHCCCCCCCCCCCEEEEECCEEEHHHHHHHH
VIGHTKGSSVANVKLEADLTEVLPPLFCKFNPCTATSPAFDFVLDFKGTTYGVGGTIVGG
HHCCCCCCCEEEEEEECCHHHHCCHHHCCCCCCCCCCCCEEEEEECCCCEEECCCEEECC
IDNWFALLDVNYTNTRLNILDGEISSIVVSPRAGYRTKYNNHDVQVWVGAMYQNVEQTFS
CCCEEEEEEECCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCEEEEHHHHHHHHHHHHH
GYLRDIGIPLGDAKFEVNQHLEDKWNGLIGSQVGLTKNFDLLMEFGVGTRSSFMLGLGYR
HHHHHCCCCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCHHHHEEECCCCCCCEEEECCCC
F
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA