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The map label for this gene is dmpD [H]

Identifier: 167625878

GI number: 167625878

Start: 4844629

End: 4845537

Strand: Reverse

Name: dmpD [H]

Synonym: Shal_3973

Alternate gene names: 167625878

Gene position: 4845537-4844629 (Counterclockwise)

Preceding gene: 167625879

Following gene: 167625877

Centisome position: 92.7

GC content: 50.72

Gene sequence:

>909_bases
ATGCGCCATATTTATCTATTGTTACTGACGCTATTTATCAGTGGCTGCTCTGCCGTCGATATCATCGACTCTCGTGAAAA
ACAGCAACTGCAAACAGCGGGGTTCGAGCAACATAAATTGGCGCTGACTGAGGGCGGCGAGCTTAATTACTGGCAAGCGG
GCCAAGGTAAGGCTGTGCTGCTTATCCATGGCTTTGGCGGTACGGCGGTGACCAGTTGGCAGCAGGTGATGCTGGAGCTC
AGTAAGGATTACCGAGTCATCGCCCCCGATCTCGCTTGGTTTGGTGAGTCAGTGAGTCTGGCTGCCCCAAGTTTGGCGAC
TCAGTCGCAGGCGGTAATGCAGCTGATCCAAGAATTGCAGCTGGATAAGGTCAATGTGGTTGGGATCTCTTATGGAGGTT
TCGTTACTTTTGATCTGATGATCAACGAGCCTAAGGTCGAGAAAGCGGTACTGCTGGCGAGCCCCGGGGTACTGTTTTCT
GACAGCGATCTACTGCAGATGAATCAGCGTTTTGAGGTCGATGATCCAAGCGCTATCTTTGTGCCTGAAACGCCAAAGCA
GATGCGGCGCTTACTCGATGCCACCTTCGTCGACTTCCCTTGGTACCCTGGCTTTATCGATTCGAGTATTTATGACAAGT
ACTTTGCAGGTTATCTAGATGAAAAGCGCAAGCTTATCGATGGGCTGCCCGCAGATAGAGATAGAATTGCCGCCAATGTC
GTGGCCGACTCGTTGCCGCCCAGTGTGTTGATTTGGGGTGAGAATGACAAAGTTTTTCCTTTGGCATCAGGCATACAACT
CGCCGATTACCTAGCTGCGCCGATAGTGGTTATCCCACAAGGAGCTCACGGGATCAGTAACGATTATCCAGAGATTGTCA
GTCAGACAATTAGGGCATTTGTGCAATGA

Upstream 100 bases:

>100_bases
GATCTGTTAATGGAGTTCGGGGTTGGTACGCGTAGCAGCTTTATGCTGGGACTAGGCTACCGATTTTAACGACATCTTAT
AAATAAATCTTGGAGGGAGT

Downstream 100 bases:

>100_bases
TAAGTCGTGTATTTAGCCATGGGATGGTGAGTGTTGTCGCTATCTTTGTACTGAGTGCCTGTGGTAGTAGTGACTGGCAG
GTGCGAGCCTTGCCCAGTGA

Product: alpha/beta hydrolase fold protein

Products: NA

Alternate protein names: HMSH [H]

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MRHIYLLLLTLFISGCSAVDIIDSREKQQLQTAGFEQHKLALTEGGELNYWQAGQGKAVLLIHGFGGTAVTSWQQVMLEL
SKDYRVIAPDLAWFGESVSLAAPSLATQSQAVMQLIQELQLDKVNVVGISYGGFVTFDLMINEPKVEKAVLLASPGVLFS
DSDLLQMNQRFEVDDPSAIFVPETPKQMRRLLDATFVDFPWYPGFIDSSIYDKYFAGYLDEKRKLIDGLPADRDRIAANV
VADSLPPSVLIWGENDKVFPLASGIQLADYLAAPIVVIPQGAHGISNDYPEIVSQTIRAFVQ

Sequences:

>Translated_302_residues
MRHIYLLLLTLFISGCSAVDIIDSREKQQLQTAGFEQHKLALTEGGELNYWQAGQGKAVLLIHGFGGTAVTSWQQVMLEL
SKDYRVIAPDLAWFGESVSLAAPSLATQSQAVMQLIQELQLDKVNVVGISYGGFVTFDLMINEPKVEKAVLLASPGVLFS
DSDLLQMNQRFEVDDPSAIFVPETPKQMRRLLDATFVDFPWYPGFIDSSIYDKYFAGYLDEKRKLIDGLPADRDRIAANV
VADSLPPSVLIWGENDKVFPLASGIQLADYLAAPIVVIPQGAHGISNDYPEIVSQTIRAFVQ
>Mature_302_residues
MRHIYLLLLTLFISGCSAVDIIDSREKQQLQTAGFEQHKLALTEGGELNYWQAGQGKAVLLIHGFGGTAVTSWQQVMLEL
SKDYRVIAPDLAWFGESVSLAAPSLATQSQAVMQLIQELQLDKVNVVGISYGGFVTFDLMINEPKVEKAVLLASPGVLFS
DSDLLQMNQRFEVDDPSAIFVPETPKQMRRLLDATFVDFPWYPGFIDSSIYDKYFAGYLDEKRKLIDGLPADRDRIAANV
VADSLPPSVLIWGENDKVFPLASGIQLADYLAAPIVVIPQGAHGISNDYPEIVSQTIRAFVQ

Specific function: Conversion of 2-hydroxymuconic acid semialdehyde to 2- hydroxypent-2,4-dienoate [H]

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dmpD/todF/xylF esterase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR000639 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 33355; Mature: 33355

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRHIYLLLLTLFISGCSAVDIIDSREKQQLQTAGFEQHKLALTEGGELNYWQAGQGKAVL
CHHHHHHHHHHHHCCCCEEEHHCCHHHHHHHHCCCCHHEEEEECCCCCCEEECCCCCEEE
LIHGFGGTAVTSWQQVMLELSKDYRVIAPDLAWFGESVSLAAPSLATQSQAVMQLIQELQ
EEECCCCHHHHHHHHHHHHHCCCCEEEECHHHHCCCCCEECCCCHHHHHHHHHHHHHHHC
LDKVNVVGISYGGFVTFDLMINEPKVEKAVLLASPGVLFSDSDLLQMNQRFEVDDPSAIF
CCCEEEEEEECCCEEEEEEEECCCCCCEEEEEECCCCEECCCHHHHHCCCCCCCCCCEEE
VPETPKQMRRLLDATFVDFPWYPGFIDSSIYDKYFAGYLDEKRKLIDGLPADRDRIAANV
CCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
VADSLPPSVLIWGENDKVFPLASGIQLADYLAAPIVVIPQGAHGISNDYPEIVSQTIRAF
HHCCCCCCEEEECCCCCEEEECCCCHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHH
VQ
CC
>Mature Secondary Structure
MRHIYLLLLTLFISGCSAVDIIDSREKQQLQTAGFEQHKLALTEGGELNYWQAGQGKAVL
CHHHHHHHHHHHHCCCCEEEHHCCHHHHHHHHCCCCHHEEEEECCCCCCEEECCCCCEEE
LIHGFGGTAVTSWQQVMLELSKDYRVIAPDLAWFGESVSLAAPSLATQSQAVMQLIQELQ
EEECCCCHHHHHHHHHHHHHCCCCEEEECHHHHCCCCCEECCCCHHHHHHHHHHHHHHHC
LDKVNVVGISYGGFVTFDLMINEPKVEKAVLLASPGVLFSDSDLLQMNQRFEVDDPSAIF
CCCEEEEEEECCCEEEEEEEECCCCCCEEEEEECCCCEECCCHHHHHCCCCCCCCCCEEE
VPETPKQMRRLLDATFVDFPWYPGFIDSSIYDKYFAGYLDEKRKLIDGLPADRDRIAANV
CCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
VADSLPPSVLIWGENDKVFPLASGIQLADYLAAPIVVIPQGAHGISNDYPEIVSQTIRAF
HHCCCCCCEEEECCCCCEEEECCCCHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHH
VQ
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2194577 [H]