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The map label for this gene is 167625870

Identifier: 167625870

GI number: 167625870

Start: 4835529

End: 4836320

Strand: Reverse

Name: 167625870

Synonym: Shal_3965

Alternate gene names: NA

Gene position: 4836320-4835529 (Counterclockwise)

Preceding gene: 167625876

Following gene: 167625869

Centisome position: 92.53

GC content: 46.46

Gene sequence:

>792_bases
ATGAAATGTCCCACTGAAACGTTGCCCATGATGCGCTGCAACCAGATACTCGACGCCGCAGAACGGCTCATTGAGTCGCA
AGGCATCGTGTCATTTAAGTTCTCGCAACTTGCGAAAGAGGTGGGATGTTCCACTGGCACACTGTATAAGTTTTTTGAGC
GTAAAGAGGATGTTTTGGTTTGTCTTTTTTTACGCAGCGCGACCTCTAACCACTTACCAATATTTATTAACAAATATCCC
GATTTAACCGCCCAAGAAAAAGTGTTGTTGCCCATTCTGTTTACATTCGAAACCATCAAGCGCAGTAAGAGTTTCTTTAC
TCTGCGCTCTGTTTCAGTCAATACCATGGTGTGGCAACTGGCCAGTGATGAGAAAGTGGATCGTTTCAAAAAGCGTATCA
ATGCGTTTTGGGGCTGGTTTACCGACTCACTCAATGAAGCCGTAGCAAGAGGCGAACTTGTGGCCACGCCACTACAGGTG
AAAGAGCTCGTTCAAGGGATCACCTTTTACCTTACAGGTTCGTTAACCCAGTTCGAAAGCCAACTGATTGCGCCTGAATA
CTTATCGAATCGTCGCGAGACCTGTTATCGCCACTTGGCAAGATTGATGGCGCAATACAAGTGGACTAAGCCATTGAATC
CTGAACTGTTTGAGTCTCTCGAGAGTCGAAGCTCGAACTTTTTCGATAAACACTATCGCGATCATATGAGTTGCAGCGCA
TGCAGTGCCTTGACCAGCTCCTCGGCCAATAGCTCAGCACCTTGTTTACGCAAAAAAGAATGCGCCGCTTAA

Upstream 100 bases:

>100_bases
TATTAGCGTGAAGTGAATCCCGATTAAGAAAGAGGTATCTATAATCGACAATTGTTAAAAGCGCATAATCGGTTTAACTC
GATAAACAGGTTGGTTATAG

Downstream 100 bases:

>100_bases
CTCTTTTTTAAAGTATAAAAAAGCCCTCCTGAAAAGAGGGCTGGCTCAGTAACCCTTACCTGATATCTTTCCAGAGTTTA
GTTAATACGCTTATTGAAGA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MKCPTETLPMMRCNQILDAAERLIESQGIVSFKFSQLAKEVGCSTGTLYKFFERKEDVLVCLFLRSATSNHLPIFINKYP
DLTAQEKVLLPILFTFETIKRSKSFFTLRSVSVNTMVWQLASDEKVDRFKKRINAFWGWFTDSLNEAVARGELVATPLQV
KELVQGITFYLTGSLTQFESQLIAPEYLSNRRETCYRHLARLMAQYKWTKPLNPELFESLESRSSNFFDKHYRDHMSCSA
CSALTSSSANSSAPCLRKKECAA

Sequences:

>Translated_263_residues
MKCPTETLPMMRCNQILDAAERLIESQGIVSFKFSQLAKEVGCSTGTLYKFFERKEDVLVCLFLRSATSNHLPIFINKYP
DLTAQEKVLLPILFTFETIKRSKSFFTLRSVSVNTMVWQLASDEKVDRFKKRINAFWGWFTDSLNEAVARGELVATPLQV
KELVQGITFYLTGSLTQFESQLIAPEYLSNRRETCYRHLARLMAQYKWTKPLNPELFESLESRSSNFFDKHYRDHMSCSA
CSALTSSSANSSAPCLRKKECAA
>Mature_263_residues
MKCPTETLPMMRCNQILDAAERLIESQGIVSFKFSQLAKEVGCSTGTLYKFFERKEDVLVCLFLRSATSNHLPIFINKYP
DLTAQEKVLLPILFTFETIKRSKSFFTLRSVSVNTMVWQLASDEKVDRFKKRINAFWGWFTDSLNEAVARGELVATPLQV
KELVQGITFYLTGSLTQFESQLIAPEYLSNRRETCYRHLARLMAQYKWTKPLNPELFESLESRSSNFFDKHYRDHMSCSA
CSALTSSSANSSAPCLRKKECAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30128; Mature: 30128

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKCPTETLPMMRCNQILDAAERLIESQGIVSFKFSQLAKEVGCSTGTLYKFFERKEDVLV
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHEE
CLFLRSATSNHLPIFINKYPDLTAQEKVLLPILFTFETIKRSKSFFTLRSVSVNTMVWQL
EEEEHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHEEHHHCHHHHHHHHH
ASDEKVDRFKKRINAFWGWFTDSLNEAVARGELVATPLQVKELVQGITFYLTGSLTQFES
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHCCCHHHHHH
QLIAPEYLSNRRETCYRHLARLMAQYKWTKPLNPELFESLESRSSNFFDKHYRDHMSCSA
HHCCHHHHHCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCHHH
CSALTSSSANSSAPCLRKKECAA
HHHHHCCCCCCCCCCCCHHHCCC
>Mature Secondary Structure
MKCPTETLPMMRCNQILDAAERLIESQGIVSFKFSQLAKEVGCSTGTLYKFFERKEDVLV
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHEE
CLFLRSATSNHLPIFINKYPDLTAQEKVLLPILFTFETIKRSKSFFTLRSVSVNTMVWQL
EEEEHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHEEHHHCHHHHHHHHH
ASDEKVDRFKKRINAFWGWFTDSLNEAVARGELVATPLQVKELVQGITFYLTGSLTQFES
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHCCCHHHHHH
QLIAPEYLSNRRETCYRHLARLMAQYKWTKPLNPELFESLESRSSNFFDKHYRDHMSCSA
HHCCHHHHHCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCHHH
CSALTSSSANSSAPCLRKKECAA
HHHHHCCCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA