| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is ilvE [H]
Identifier: 167625847
GI number: 167625847
Start: 4807350
End: 4808279
Strand: Reverse
Name: ilvE [H]
Synonym: Shal_3942
Alternate gene names: 167625847
Gene position: 4808279-4807350 (Counterclockwise)
Preceding gene: 167625848
Following gene: 167625846
Centisome position: 91.99
GC content: 50.0
Gene sequence:
>930_bases ATGGCCGCGAAAACAGCAGAGTTAATTTGGTTCAATGGTGAAATGATGCCTTGGGGTGATGCTAAGGTTCATGTCATGTC TCACGCGCTGCACTATGGTACTTCCGTTTTTGAAGGCATACGTGTTTACGATACTCATCGCGGTCCGGCGGGGTTTCGTT TAACTGAGCATATTCAGCGCCTATTTGATTCTGCCAAGATTTACCGTATGCCTATCCCATATAGCTTCGATAATGTTATG CAGGCGTGTCGAGACGCCACATTAGGCAATGGTTTAAAGAGCGCTTATATCCGCCCCTTAGCCTTTTATGGTGATGTTGG TATGGGGATCACCCCCCCTAAAGATGCTCAGTGCGACTTGTTAGTCGCAGCATTTCCGTGGGGAGCCTATTTAGGGGAAG ACAGCATGGATGCCGGGGTCGATGTCGCGGTAACCTCCTGGAATCGCTTAGCGCCAAACACGATTCCAACGGGAGCCAAA GCGGGCGGGAATTACCTCTCTTCGCTACAGATCTCTACCGAAGCTAAACGTAACGGTTTCGATGAAGGGATTGCACTCGA TACTAACGGTTTAGTCAGCGAAGCCGCTGGTGCCAATATTTTTGTCATTAAAAAGAACAAGATCTACACACCTCCAGCCA CAGCCGCTATTCTGATGGGGCTGACTCGAGACAGCATTATTACTCTTGCACGAGATAAAGGTTATCAAGTGGTTGAAGAG CCGATGTCACGCGAGTTTCTCTACCTTGCCGATGAGATCTTTATGACCGGCACCGCGGCCGAAATTGTGCCGGTACGTAG CGTCGATCGCATCGAGATAGGCAGCGGCAAGCGCGGTGAGATCACCAAAGAAATTCAGCAGAGCTTTTTCGGCCTGTTCA GCGGTGAAACCGAAGACAAGTGGGGTTGGTTGGAGGCTTTGGAAGGCTAA
Upstream 100 bases:
>100_bases TTGCTAACCAATCAAATAAATAAGCTTATTGATGTGATTGATTGCCAAGTATTGGTAAATAACACCGCAGTAGCATTAGC ACAAAATAAAGGGTGAGAAT
Downstream 100 bases:
>100_bases GACGAACGCTGTGCTGACGGAAAGGCCGGAAAAGCAGATCCTAGGTACTAGAAAAAGCTAAGAAAGGCCCTAGGAAAGCA GAGGCTAAGACGAACGCTGT
Product: branched-chain amino acid aminotransferase
Products: NA
Alternate protein names: BCAT; Transaminase B [H]
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MAAKTAELIWFNGEMMPWGDAKVHVMSHALHYGTSVFEGIRVYDTHRGPAGFRLTEHIQRLFDSAKIYRMPIPYSFDNVM QACRDATLGNGLKSAYIRPLAFYGDVGMGITPPKDAQCDLLVAAFPWGAYLGEDSMDAGVDVAVTSWNRLAPNTIPTGAK AGGNYLSSLQISTEAKRNGFDEGIALDTNGLVSEAAGANIFVIKKNKIYTPPATAAILMGLTRDSIITLARDKGYQVVEE PMSREFLYLADEIFMTGTAAEIVPVRSVDRIEIGSGKRGEITKEIQQSFFGLFSGETEDKWGWLEALEG
Sequences:
>Translated_309_residues MAAKTAELIWFNGEMMPWGDAKVHVMSHALHYGTSVFEGIRVYDTHRGPAGFRLTEHIQRLFDSAKIYRMPIPYSFDNVM QACRDATLGNGLKSAYIRPLAFYGDVGMGITPPKDAQCDLLVAAFPWGAYLGEDSMDAGVDVAVTSWNRLAPNTIPTGAK AGGNYLSSLQISTEAKRNGFDEGIALDTNGLVSEAAGANIFVIKKNKIYTPPATAAILMGLTRDSIITLARDKGYQVVEE PMSREFLYLADEIFMTGTAAEIVPVRSVDRIEIGSGKRGEITKEIQQSFFGLFSGETEDKWGWLEALEG >Mature_308_residues AAKTAELIWFNGEMMPWGDAKVHVMSHALHYGTSVFEGIRVYDTHRGPAGFRLTEHIQRLFDSAKIYRMPIPYSFDNVMQ ACRDATLGNGLKSAYIRPLAFYGDVGMGITPPKDAQCDLLVAAFPWGAYLGEDSMDAGVDVAVTSWNRLAPNTIPTGAKA GGNYLSSLQISTEAKRNGFDEGIALDTNGLVSEAAGANIFVIKKNKIYTPPATAAILMGLTRDSIITLARDKGYQVVEEP MSREFLYLADEIFMTGTAAEIVPVRSVDRIEIGSGKRGEITKEIQQSFFGLFSGETEDKWGWLEALEG
Specific function: Acts on leucine, isoleucine and valine [H]
COG id: COG0115
COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI50658084, Length=319, Percent_Identity=25.3918495297806, Blast_Score=79, Evalue=5e-15, Organism=Homo sapiens, GI296010904, Length=334, Percent_Identity=25.748502994012, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI296010906, Length=334, Percent_Identity=25.748502994012, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI38176287, Length=334, Percent_Identity=25.748502994012, Blast_Score=71, Evalue=2e-12, Organism=Escherichia coli, GI48994963, Length=307, Percent_Identity=63.843648208469, Blast_Score=429, Evalue=1e-122, Organism=Escherichia coli, GI1787338, Length=252, Percent_Identity=26.1904761904762, Blast_Score=68, Evalue=9e-13, Organism=Caenorhabditis elegans, GI17565728, Length=289, Percent_Identity=25.9515570934256, Blast_Score=69, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6322002, Length=317, Percent_Identity=26.1829652996845, Blast_Score=78, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6322608, Length=339, Percent_Identity=26.5486725663717, Blast_Score=77, Evalue=5e-15, Organism=Drosophila melanogaster, GI24641779, Length=282, Percent_Identity=27.3049645390071, Blast_Score=74, Evalue=1e-13,
Paralogues:
None
Copy number: 2342 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 11,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001544 - InterPro: IPR018300 - InterPro: IPR005785 [H]
Pfam domain/function: PF01063 Aminotran_4 [H]
EC number: =2.6.1.42 [H]
Molecular weight: Translated: 33808; Mature: 33677
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: PS00770 AA_TRANSFER_CLASS_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAKTAELIWFNGEMMPWGDAKVHVMSHALHYGTSVFEGIRVYDTHRGPAGFRLTEHIQR CCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHH LFDSAKIYRMPIPYSFDNVMQACRDATLGNGLKSAYIRPLAFYGDVGMGITPPKDAQCDL HHCCCEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHCEEEEECCCCCCCCCCCCCCCCE LVAAFPWGAYLGEDSMDAGVDVAVTSWNRLAPNTIPTGAKAGGNYLSSLQISTEAKRNGF EEEECCCCHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHEEEEECHHHHCCC DEGIALDTNGLVSEAAGANIFVIKKNKIYTPPATAAILMGLTRDSIITLARDKGYQVVEE CCCEEECCCCCHHHCCCCEEEEEECCEEECCCHHHHHHHHCCCCCEEEEECCCCCHHHHH PMSREFLYLADEIFMTGTAAEIVPVRSVDRIEIGSGKRGEITKEIQQSFFGLFSGETEDK HHCCHHHEEEHHHHCCCCCCEEEECCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCC WGWLEALEG CHHHHHCCC >Mature Secondary Structure AAKTAELIWFNGEMMPWGDAKVHVMSHALHYGTSVFEGIRVYDTHRGPAGFRLTEHIQR CCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHH LFDSAKIYRMPIPYSFDNVMQACRDATLGNGLKSAYIRPLAFYGDVGMGITPPKDAQCDL HHCCCEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHCEEEEECCCCCCCCCCCCCCCCE LVAAFPWGAYLGEDSMDAGVDVAVTSWNRLAPNTIPTGAKAGGNYLSSLQISTEAKRNGF EEEECCCCHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHEEEEECHHHHCCC DEGIALDTNGLVSEAAGANIFVIKKNKIYTPPATAAILMGLTRDSIITLARDKGYQVVEE CCCEEECCCCCHHHCCCCEEEEEECCEEECCCHHHHHHHHCCCCCEEEEECCCCCHHHHH PMSREFLYLADEIFMTGTAAEIVPVRSVDRIEIGSGKRGEITKEIQQSFFGLFSGETEDK HHCCHHHEEEHHHHCCCCCCEEEECCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCC WGWLEALEG CHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]