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The map label for this gene is yigB [H]

Identifier: 167625814

GI number: 167625814

Start: 4745721

End: 4746437

Strand: Reverse

Name: yigB [H]

Synonym: Shal_3909

Alternate gene names: 167625814

Gene position: 4746437-4745721 (Counterclockwise)

Preceding gene: 167625815

Following gene: 167625812

Centisome position: 90.81

GC content: 49.93

Gene sequence:

>717_bases
ATGAAGATCTTTATTCGCCCACAGCCCTTTGAAGCCATTAGCTTCGACTTAGATGATACCCTCTATGATAATCGGCCAAT
CATTCGAAACGCCGAAGCCGCGCTACAGAAGTTTTTACATCAAGCCTATCCTAAGTCTGCCAAGTGGCAGTTTGCCGATT
GGCGCAGGCTTAAATTCGCTCTGTTTAGTGACTCTCCTGAGCTGCGTAATGATACGACCGCCGCGCGATTGGCAATGTTA
GAACGTGGTCTACTGCAATTGGGTTATGACGCTCAAACCGCGCAAACAGGCGCACAGGCAGGTCTTGATCACTTCGTGAA
GCATCGTAGTCACTTCAAAGTATCGACTGAGGTTATTGAGCTGCTGGCTCAGCTTAAGCAGAAGTATCGCTTAGTTGGGA
TCACCAATGGTAATGTCGACCATCAAAGGATCGGTTTAGAGGGGGTATTCGAGTTCGTACTGCACCCCGGGCACGGCTAT
AAGCAAAAGCCATCACCAGAGATGTTTGTATTGGCCGCTGAAAAACTGGGGCTACCTTTGGCAAATATTCTTCATGTTGG
TGACAGCGCATCGAGCGATGTCGATGGTGCAAGGGTGGCTGGTTGTCAGACCGTGTGGCTTAACCCGAGCTTTGGGGGAA
CTGAGAAGTCGAGCGCCAACGGGCTATTACCTCATATTGAGATATCGTCTGTGCAGCAGCTGAGGCAGCTTCTCTAG

Upstream 100 bases:

>100_bases
ACTTGTCGACTACCCAAGTTTATACCAGTCTAGACTTTCAACATCTTGCCAAGGTATACGACGGTGCACATCCAAGAGCG
AGAAAAAGAGGCAACAGCTG

Downstream 100 bases:

>100_bases
CTTATGAAAGCGCCATTTAATAAAAAAGCTCACAATCGTGAGCCTTTGTACTTTTTAAAGCCTAGCTTTAAAGCTCTTGT
TTAAAAGCAGGCTTTAAGCG

Product: HAD family hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MKIFIRPQPFEAISFDLDDTLYDNRPIIRNAEAALQKFLHQAYPKSAKWQFADWRRLKFALFSDSPELRNDTTAARLAML
ERGLLQLGYDAQTAQTGAQAGLDHFVKHRSHFKVSTEVIELLAQLKQKYRLVGITNGNVDHQRIGLEGVFEFVLHPGHGY
KQKPSPEMFVLAAEKLGLPLANILHVGDSASSDVDGARVAGCQTVWLNPSFGGTEKSSANGLLPHIEISSVQQLRQLL

Sequences:

>Translated_238_residues
MKIFIRPQPFEAISFDLDDTLYDNRPIIRNAEAALQKFLHQAYPKSAKWQFADWRRLKFALFSDSPELRNDTTAARLAML
ERGLLQLGYDAQTAQTGAQAGLDHFVKHRSHFKVSTEVIELLAQLKQKYRLVGITNGNVDHQRIGLEGVFEFVLHPGHGY
KQKPSPEMFVLAAEKLGLPLANILHVGDSASSDVDGARVAGCQTVWLNPSFGGTEKSSANGLLPHIEISSVQQLRQLL
>Mature_238_residues
MKIFIRPQPFEAISFDLDDTLYDNRPIIRNAEAALQKFLHQAYPKSAKWQFADWRRLKFALFSDSPELRNDTTAARLAML
ERGLLQLGYDAQTAQTGAQAGLDHFVKHRSHFKVSTEVIELLAQLKQKYRLVGITNGNVDHQRIGLEGVFEFVLHPGHGY
KQKPSPEMFVLAAEKLGLPLANILHVGDSASSDVDGARVAGCQTVWLNPSFGGTEKSSANGLLPHIEISSVQQLRQLL

Specific function: Unknown

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yjjG [H]

Homologues:

Organism=Homo sapiens, GI23308749, Length=234, Percent_Identity=26.9230769230769, Blast_Score=71, Evalue=7e-13,
Organism=Escherichia coli, GI2367295, Length=236, Percent_Identity=40.6779661016949, Blast_Score=175, Evalue=3e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006439 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 26560; Mature: 26560

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIFIRPQPFEAISFDLDDTLYDNRPIIRNAEAALQKFLHQAYPKSAKWQFADWRRLKFA
CEEEECCCCCCEEEECCCCHHCCCCCCEECHHHHHHHHHHHHCCCCCCCCCCCHHHEEEE
LFSDSPELRNDTTAARLAMLERGLLQLGYDAQTAQTGAQAGLDHFVKHRSHFKVSTEVIE
EECCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LLAQLKQKYRLVGITNGNVDHQRIGLEGVFEFVLHPGHGYKQKPSPEMFVLAAEKLGLPL
HHHHHHHCEEEEEEECCCCCHHHHCHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHCCCH
ANILHVGDSASSDVDGARVAGCQTVWLNPSFGGTEKSSANGLLPHIEISSVQQLRQLL
HHHHCCCCCCCCCCCCCEECCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHC
>Mature Secondary Structure
MKIFIRPQPFEAISFDLDDTLYDNRPIIRNAEAALQKFLHQAYPKSAKWQFADWRRLKFA
CEEEECCCCCCEEEECCCCHHCCCCCCEECHHHHHHHHHHHHCCCCCCCCCCCHHHEEEE
LFSDSPELRNDTTAARLAMLERGLLQLGYDAQTAQTGAQAGLDHFVKHRSHFKVSTEVIE
EECCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LLAQLKQKYRLVGITNGNVDHQRIGLEGVFEFVLHPGHGYKQKPSPEMFVLAAEKLGLPL
HHHHHHHCEEEEEEECCCCCHHHHCHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHCCCH
ANILHVGDSASSDVDGARVAGCQTVWLNPSFGGTEKSSANGLLPHIEISSVQQLRQLL
HHHHCCCCCCCCCCCCCEECCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2254268; 1379743; 9278503; 6379604; 6324092 [H]