BacMap

Definition	Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession	NC_010334
Length	5,226,917

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The map label for this gene is rhlB [H]

Identifier: 167625797

GI number: 167625797

Start: 4724564

End: 4725874

Strand: Reverse

Name: rhlB [H]

Synonym: Shal_3892

Alternate gene names: 167625797

Gene position: 4725874-4724564 (Counterclockwise)

Preceding gene: 167625800

Following gene: 167625796

Centisome position: 90.41

GC content: 44.7

Gene sequence:

>1311_bases
ATGAGCGATACACATTTATCTACACAGAAGTTTGCTGACTTTCCTCTACATAAAGAGGTTCATCAGGCACTTAACGAAGC
AGGATTTGAGTTTTGTACTCCAATTCAAGCTTTATCGTTACCCATTTTATTAGAAAAAAAAGATATAGCGGGTCAGGCAC
AAACAGGTACGGGTAAAACACTGGCCTTTTTAGTTGCCACGTTTAACCACCTCCTATCGACGCCAATCCCTGCCGAACGT
CAACTAAATCAGCCTCGCGCTATTATTATGGCGCCAACTCGAGAATTAGCGATTCAAATTGCTAAAGATGCGAATCTACT
GGCTAAGCATACTGGCCTTAAGGTCGGTATCGTTTACGGCGGTGAAGGCTACGAAGTTCAGCGCAAAGTATTAGATAAAG
GCGTTGATATACTGATTGGTACCACTGGCCGCATTATCGATTATGTGCGTCAAGGCGTGATCAATGTTAGCTGTATTCAA
GCCGTTGTACTTGATGAAGCTGATCGCATGTTCGATCTTGGCTTTATTAAGGACATTCGTTTCTTGTTTAGACGTATGCC
TGATGCTAAATCACGTTTGAATATGTTGTTCTCTGCAACGCTTTCAATGAAAGTGCAAGAACTTGCTTATGACCACATGA
ATGAGCCAGAGAAAGTTGAGATTGCGCCAAACGAGAAAACATCAAAGAACATTAAAGAGGAAATCTTCTATCCATCGATG
GAGGAGAAGATGCCTTTGCTATTGTCTTTGCTTGAAGAAGACTGGCCAGAAAAAGCCATCGTATTTTCTAATACCAAACA
CAGCTGTGAAAAAGTATGGTCATGGCTTGAAGGTGACGGCCATCGCGCAGGCTTGCTAACAGGCGATGTACCGCAGAAGA
AGCGTTTACGTATTCTGGAGCAATTCACTAAAGGTGAAATTGATATCTTAGTGGCAACCGATGTTGCGGCGCGTGGCTTA
CATATCGCAGATGTGTCTCATGTGTACAACTACGATCTACCTGACGACTGTGAAGATTACGTACACCGTATTGGTCGTAC
TGGTCGTGCTGGTCAAAAAGGGATCTCGGTCAGCTTTGCATGTGAAGAATACGCATTGAACTTACCTGCTATCGAGTCTT
ATATTCAACACTCGATCCCAGTGACGTCATACGACAGTGATGCGCTGCTTGATGATATTCCACCACCAGTGCGAATTCAT
CGTAAGCCAAGCACTCATACTCGCAATACCCGAGACCGTGGTGCAAGTCGTCCACAAGGTGGTCAGCGCAGTGGCCCGCG
TCGTCACGACAGAACGCGTAGACATTCATAG

Upstream 100 bases:

>100_bases
ACGTTTCTCCGAGTGTGCACCAATTTTCCGTGATAAAATTCTATCGCTATTTCAAACGATCGAGTTTTTTATTGCAACCT
TTTACAGGTAAGCCTGCGCT

Downstream 100 bases:

>100_bases
GCGATAACGCTTAATGACAACACCTCTTTATGCAGCCATTACGTTAGGCTCAAATAGTTTTAATATGTTGGTTGCTCAAA
CAGCGGTTCAACAGCCTAAA

Product: ATP-dependent RNA helicase RhlB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 436; Mature: 435

Protein sequence:

>436_residues
MSDTHLSTQKFADFPLHKEVHQALNEAGFEFCTPIQALSLPILLEKKDIAGQAQTGTGKTLAFLVATFNHLLSTPIPAER
QLNQPRAIIMAPTRELAIQIAKDANLLAKHTGLKVGIVYGGEGYEVQRKVLDKGVDILIGTTGRIIDYVRQGVINVSCIQ
AVVLDEADRMFDLGFIKDIRFLFRRMPDAKSRLNMLFSATLSMKVQELAYDHMNEPEKVEIAPNEKTSKNIKEEIFYPSM
EEKMPLLLSLLEEDWPEKAIVFSNTKHSCEKVWSWLEGDGHRAGLLTGDVPQKKRLRILEQFTKGEIDILVATDVAARGL
HIADVSHVYNYDLPDDCEDYVHRIGRTGRAGQKGISVSFACEEYALNLPAIESYIQHSIPVTSYDSDALLDDIPPPVRIH
RKPSTHTRNTRDRGASRPQGGQRSGPRRHDRTRRHS

Sequences:

>Translated_436_residues
MSDTHLSTQKFADFPLHKEVHQALNEAGFEFCTPIQALSLPILLEKKDIAGQAQTGTGKTLAFLVATFNHLLSTPIPAER
QLNQPRAIIMAPTRELAIQIAKDANLLAKHTGLKVGIVYGGEGYEVQRKVLDKGVDILIGTTGRIIDYVRQGVINVSCIQ
AVVLDEADRMFDLGFIKDIRFLFRRMPDAKSRLNMLFSATLSMKVQELAYDHMNEPEKVEIAPNEKTSKNIKEEIFYPSM
EEKMPLLLSLLEEDWPEKAIVFSNTKHSCEKVWSWLEGDGHRAGLLTGDVPQKKRLRILEQFTKGEIDILVATDVAARGL
HIADVSHVYNYDLPDDCEDYVHRIGRTGRAGQKGISVSFACEEYALNLPAIESYIQHSIPVTSYDSDALLDDIPPPVRIH
RKPSTHTRNTRDRGASRPQGGQRSGPRRHDRTRRHS
>Mature_435_residues
SDTHLSTQKFADFPLHKEVHQALNEAGFEFCTPIQALSLPILLEKKDIAGQAQTGTGKTLAFLVATFNHLLSTPIPAERQ
LNQPRAIIMAPTRELAIQIAKDANLLAKHTGLKVGIVYGGEGYEVQRKVLDKGVDILIGTTGRIIDYVRQGVINVSCIQA
VVLDEADRMFDLGFIKDIRFLFRRMPDAKSRLNMLFSATLSMKVQELAYDHMNEPEKVEIAPNEKTSKNIKEEIFYPSME
EKMPLLLSLLEEDWPEKAIVFSNTKHSCEKVWSWLEGDGHRAGLLTGDVPQKKRLRILEQFTKGEIDILVATDVAARGLH
IADVSHVYNYDLPDDCEDYVHRIGRTGRAGQKGISVSFACEEYALNLPAIESYIQHSIPVTSYDSDALLDDIPPPVRIHR
KPSTHTRNTRDRGASRPQGGQRSGPRRHDRTRRHS

Specific function: Can carry out ATP-dependent unwinding of double stranded RNA. Has a role in RNA decay. Involved in the RNA degradosome, a multi-enzyme complex important in RNA processing and messenger RNA degradation [H]

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI41327771, Length=409, Percent_Identity=35.6968215158924, Blast_Score=230, Evalue=2e-60,
Organism=Homo sapiens, GI301171467, Length=368, Percent_Identity=36.4130434782609, Blast_Score=228, Evalue=6e-60,
Organism=Homo sapiens, GI222352149, Length=355, Percent_Identity=39.4366197183099, Blast_Score=228, Evalue=7e-60,
Organism=Homo sapiens, GI87196351, Length=368, Percent_Identity=36.4130434782609, Blast_Score=228, Evalue=7e-60,
Organism=Homo sapiens, GI301171475, Length=368, Percent_Identity=36.4130434782609, Blast_Score=228, Evalue=8e-60,
Organism=Homo sapiens, GI169881239, Length=370, Percent_Identity=35.6756756756757, Blast_Score=222, Evalue=5e-58,
Organism=Homo sapiens, GI13514809, Length=370, Percent_Identity=35.6756756756757, Blast_Score=222, Evalue=5e-58,
Organism=Homo sapiens, GI148613856, Length=353, Percent_Identity=39.0934844192635, Blast_Score=221, Evalue=1e-57,
Organism=Homo sapiens, GI38201710, Length=353, Percent_Identity=39.0934844192635, Blast_Score=221, Evalue=1e-57,
Organism=Homo sapiens, GI45446747, Length=355, Percent_Identity=35.2112676056338, Blast_Score=213, Evalue=3e-55,
Organism=Homo sapiens, GI45446743, Length=355, Percent_Identity=35.2112676056338, Blast_Score=213, Evalue=3e-55,
Organism=Homo sapiens, GI262118318, Length=356, Percent_Identity=35.1123595505618, Blast_Score=213, Evalue=4e-55,
Organism=Homo sapiens, GI262231852, Length=356, Percent_Identity=35.1123595505618, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI216548263, Length=356, Percent_Identity=35.1123595505618, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI13518015, Length=356, Percent_Identity=35.1123595505618, Blast_Score=211, Evalue=1e-54,
Organism=Homo sapiens, GI55749865, Length=359, Percent_Identity=36.4902506963788, Blast_Score=209, Evalue=5e-54,
Organism=Homo sapiens, GI4758138, Length=353, Percent_Identity=37.9603399433428, Blast_Score=207, Evalue=2e-53,
Organism=Homo sapiens, GI224593278, Length=365, Percent_Identity=35.6164383561644, Blast_Score=205, Evalue=8e-53,
Organism=Homo sapiens, GI21071032, Length=384, Percent_Identity=32.2916666666667, Blast_Score=204, Evalue=2e-52,
Organism=Homo sapiens, GI7661920, Length=375, Percent_Identity=32.2666666666667, Blast_Score=201, Evalue=2e-51,
Organism=Homo sapiens, GI50659095, Length=414, Percent_Identity=33.0917874396135, Blast_Score=197, Evalue=2e-50,
Organism=Homo sapiens, GI20149629, Length=375, Percent_Identity=33.0666666666667, Blast_Score=196, Evalue=3e-50,
Organism=Homo sapiens, GI41327773, Length=356, Percent_Identity=36.5168539325843, Blast_Score=196, Evalue=5e-50,
Organism=Homo sapiens, GI164664518, Length=403, Percent_Identity=30.5210918114144, Blast_Score=194, Evalue=1e-49,
Organism=Homo sapiens, GI13129006, Length=357, Percent_Identity=33.8935574229692, Blast_Score=190, Evalue=2e-48,
Organism=Homo sapiens, GI51094101, Length=363, Percent_Identity=32.2314049586777, Blast_Score=188, Evalue=7e-48,
Organism=Homo sapiens, GI164419743, Length=363, Percent_Identity=32.2314049586777, Blast_Score=188, Evalue=8e-48,
Organism=Homo sapiens, GI41327779, Length=379, Percent_Identity=35.0923482849604, Blast_Score=181, Evalue=1e-45,
Organism=Homo sapiens, GI13514831, Length=384, Percent_Identity=31.25, Blast_Score=180, Evalue=2e-45,
Organism=Homo sapiens, GI4758112, Length=358, Percent_Identity=31.2849162011173, Blast_Score=174, Evalue=1e-43,
Organism=Homo sapiens, GI18375623, Length=358, Percent_Identity=31.2849162011173, Blast_Score=174, Evalue=1e-43,
Organism=Homo sapiens, GI21040371, Length=358, Percent_Identity=31.2849162011173, Blast_Score=171, Evalue=9e-43,
Organism=Homo sapiens, GI8922886, Length=373, Percent_Identity=31.0991957104558, Blast_Score=169, Evalue=3e-42,
Organism=Homo sapiens, GI6005743, Length=373, Percent_Identity=31.0991957104558, Blast_Score=169, Evalue=4e-42,
Organism=Homo sapiens, GI31542656, Length=391, Percent_Identity=31.2020460358056, Blast_Score=166, Evalue=3e-41,
Organism=Homo sapiens, GI188035877, Length=353, Percent_Identity=29.1784702549575, Blast_Score=164, Evalue=1e-40,
Organism=Homo sapiens, GI38569503, Length=388, Percent_Identity=28.8659793814433, Blast_Score=164, Evalue=1e-40,
Organism=Homo sapiens, GI38569505, Length=388, Percent_Identity=28.8659793814433, Blast_Score=164, Evalue=1e-40,
Organism=Homo sapiens, GI38327634, Length=334, Percent_Identity=32.3353293413174, Blast_Score=163, Evalue=3e-40,
Organism=Homo sapiens, GI62241022, Length=352, Percent_Identity=31.8181818181818, Blast_Score=163, Evalue=3e-40,
Organism=Homo sapiens, GI41327776, Length=375, Percent_Identity=29.6, Blast_Score=162, Evalue=4e-40,
Organism=Homo sapiens, GI17505907, Length=409, Percent_Identity=30.0733496332518, Blast_Score=161, Evalue=1e-39,
Organism=Homo sapiens, GI4503529, Length=374, Percent_Identity=32.0855614973262, Blast_Score=159, Evalue=4e-39,
Organism=Homo sapiens, GI83700235, Length=373, Percent_Identity=31.9034852546917, Blast_Score=159, Evalue=4e-39,
Organism=Homo sapiens, GI164419732, Length=362, Percent_Identity=29.5580110497238, Blast_Score=156, Evalue=3e-38,
Organism=Homo sapiens, GI62241024, Length=331, Percent_Identity=31.7220543806647, Blast_Score=156, Evalue=4e-38,
Organism=Homo sapiens, GI256223453, Length=365, Percent_Identity=30.1369863013699, Blast_Score=150, Evalue=3e-36,
Organism=Homo sapiens, GI9966805, Length=313, Percent_Identity=30.6709265175719, Blast_Score=146, Evalue=3e-35,
Organism=Homo sapiens, GI256773275, Length=395, Percent_Identity=29.1139240506329, Blast_Score=145, Evalue=7e-35,
Organism=Homo sapiens, GI9506931, Length=407, Percent_Identity=27.2727272727273, Blast_Score=139, Evalue=4e-33,
Organism=Homo sapiens, GI4826686, Length=338, Percent_Identity=30.7692307692308, Blast_Score=131, Evalue=1e-30,
Organism=Homo sapiens, GI154759257, Length=415, Percent_Identity=26.5060240963855, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI20336298, Length=220, Percent_Identity=33.6363636363636, Blast_Score=120, Evalue=3e-27,
Organism=Escherichia coli, GI1790214, Length=438, Percent_Identity=64.8401826484018, Blast_Score=590, Evalue=1e-170,
Organism=Escherichia coli, GI87082221, Length=381, Percent_Identity=38.0577427821522, Blast_Score=262, Evalue=3e-71,
Organism=Escherichia coli, GI1787016, Length=380, Percent_Identity=37.3684210526316, Blast_Score=259, Evalue=4e-70,
Organism=Escherichia coli, GI1788930, Length=378, Percent_Identity=36.5079365079365, Blast_Score=236, Evalue=2e-63,
Organism=Escherichia coli, GI1787605, Length=354, Percent_Identity=37.0056497175141, Blast_Score=221, Evalue=7e-59,
Organism=Caenorhabditis elegans, GI17510307, Length=365, Percent_Identity=39.4520547945205, Blast_Score=237, Evalue=8e-63,
Organism=Caenorhabditis elegans, GI17510309, Length=365, Percent_Identity=39.4520547945205, Blast_Score=237, Evalue=1e-62,
Organism=Caenorhabditis elegans, GI71995718, Length=363, Percent_Identity=38.8429752066116, Blast_Score=237, Evalue=1e-62,
Organism=Caenorhabditis elegans, GI71995514, Length=365, Percent_Identity=39.4520547945205, Blast_Score=236, Evalue=1e-62,
Organism=Caenorhabditis elegans, GI32565321, Length=374, Percent_Identity=37.1657754010695, Blast_Score=227, Evalue=7e-60,
Organism=Caenorhabditis elegans, GI86570094, Length=344, Percent_Identity=38.6627906976744, Blast_Score=211, Evalue=8e-55,
Organism=Caenorhabditis elegans, GI115533224, Length=356, Percent_Identity=35.6741573033708, Blast_Score=207, Evalue=7e-54,
Organism=Caenorhabditis elegans, GI17507877, Length=383, Percent_Identity=35.7702349869452, Blast_Score=205, Evalue=3e-53,
Organism=Caenorhabditis elegans, GI17507879, Length=388, Percent_Identity=35.0515463917526, Blast_Score=203, Evalue=1e-52,
Organism=Caenorhabditis elegans, GI71987143, Length=375, Percent_Identity=32.5333333333333, Blast_Score=201, Evalue=9e-52,
Organism=Caenorhabditis elegans, GI71995724, Length=370, Percent_Identity=31.8918918918919, Blast_Score=200, Evalue=1e-51,
Organism=Caenorhabditis elegans, GI17552642, Length=357, Percent_Identity=35.8543417366947, Blast_Score=200, Evalue=1e-51,
Organism=Caenorhabditis elegans, GI17507121, Length=370, Percent_Identity=31.8918918918919, Blast_Score=200, Evalue=1e-51,
Organism=Caenorhabditis elegans, GI17510559, Length=381, Percent_Identity=32.5459317585302, Blast_Score=199, Evalue=3e-51,
Organism=Caenorhabditis elegans, GI17555296, Length=355, Percent_Identity=33.2394366197183, Blast_Score=196, Evalue=2e-50,
Organism=Caenorhabditis elegans, GI17507881, Length=374, Percent_Identity=34.2245989304813, Blast_Score=195, Evalue=5e-50,
Organism=Caenorhabditis elegans, GI17507945, Length=338, Percent_Identity=35.207100591716, Blast_Score=193, Evalue=1e-49,
Organism=Caenorhabditis elegans, GI17537549, Length=359, Percent_Identity=35.933147632312, Blast_Score=189, Evalue=3e-48,
Organism=Caenorhabditis elegans, GI17509811, Length=383, Percent_Identity=32.3759791122715, Blast_Score=182, Evalue=3e-46,
Organism=Caenorhabditis elegans, GI115532546, Length=385, Percent_Identity=30.6493506493506, Blast_Score=179, Evalue=2e-45,
Organism=Caenorhabditis elegans, GI115532548, Length=385, Percent_Identity=30.6493506493506, Blast_Score=179, Evalue=2e-45,
Organism=Caenorhabditis elegans, GI71999646, Length=346, Percent_Identity=32.0809248554913, Blast_Score=179, Evalue=3e-45,
Organism=Caenorhabditis elegans, GI71999644, Length=346, Percent_Identity=32.0809248554913, Blast_Score=179, Evalue=4e-45,
Organism=Caenorhabditis elegans, GI17552114, Length=370, Percent_Identity=30.2702702702703, Blast_Score=171, Evalue=9e-43,
Organism=Caenorhabditis elegans, GI71982858, Length=357, Percent_Identity=29.9719887955182, Blast_Score=167, Evalue=8e-42,
Organism=Caenorhabditis elegans, GI17536099, Length=406, Percent_Identity=31.7733990147783, Blast_Score=164, Evalue=1e-40,
Organism=Caenorhabditis elegans, GI17536101, Length=406, Percent_Identity=31.7733990147783, Blast_Score=163, Evalue=1e-40,
Organism=Caenorhabditis elegans, GI17505370, Length=338, Percent_Identity=34.9112426035503, Blast_Score=163, Evalue=2e-40,
Organism=Caenorhabditis elegans, GI193208216, Length=373, Percent_Identity=32.4396782841823, Blast_Score=163, Evalue=2e-40,
Organism=Caenorhabditis elegans, GI17536103, Length=406, Percent_Identity=31.7733990147783, Blast_Score=161, Evalue=6e-40,
Organism=Caenorhabditis elegans, GI71990816, Length=372, Percent_Identity=33.3333333333333, Blast_Score=159, Evalue=4e-39,
Organism=Caenorhabditis elegans, GI17508543, Length=380, Percent_Identity=28.1578947368421, Blast_Score=157, Evalue=1e-38,
Organism=Caenorhabditis elegans, GI17507641, Length=383, Percent_Identity=30.8093994778068, Blast_Score=155, Evalue=3e-38,
Organism=Caenorhabditis elegans, GI32564046, Length=370, Percent_Identity=30.8108108108108, Blast_Score=149, Evalue=3e-36,
Organism=Caenorhabditis elegans, GI193206561, Length=360, Percent_Identity=29.1666666666667, Blast_Score=144, Evalue=7e-35,
Organism=Caenorhabditis elegans, GI25148203, Length=416, Percent_Identity=25.7211538461538, Blast_Score=127, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI17556951, Length=332, Percent_Identity=28.0120481927711, Blast_Score=121, Evalue=6e-28,
Organism=Caenorhabditis elegans, GI17553716, Length=368, Percent_Identity=27.1739130434783, Blast_Score=117, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI25148291, Length=330, Percent_Identity=28.1818181818182, Blast_Score=117, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI71997889, Length=378, Percent_Identity=25.9259259259259, Blast_Score=102, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI71982862, Length=208, Percent_Identity=29.8076923076923, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI71987152, Length=89, Percent_Identity=47.1910112359551, Blast_Score=92, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI17557982, Length=374, Percent_Identity=23.7967914438503, Blast_Score=78, Evalue=9e-15,
Organism=Saccharomyces cerevisiae, GI6325138, Length=359, Percent_Identity=38.4401114206128, Blast_Score=244, Evalue=2e-65,
Organism=Saccharomyces cerevisiae, GI6324778, Length=414, Percent_Identity=35.2657004830918, Blast_Score=234, Evalue=3e-62,
Organism=Saccharomyces cerevisiae, GI6324217, Length=363, Percent_Identity=37.465564738292, Blast_Score=228, Evalue=2e-60,
Organism=Saccharomyces cerevisiae, GI6321360, Length=340, Percent_Identity=37.9411764705882, Blast_Score=218, Evalue=1e-57,
Organism=Saccharomyces cerevisiae, GI6323021, Length=361, Percent_Identity=34.0720221606648, Blast_Score=204, Evalue=3e-53,
Organism=Saccharomyces cerevisiae, GI6320041, Length=362, Percent_Identity=31.767955801105, Blast_Score=197, Evalue=2e-51,
Organism=Saccharomyces cerevisiae, GI6321856, Length=386, Percent_Identity=33.9378238341969, Blast_Score=194, Evalue=3e-50,
Organism=Saccharomyces cerevisiae, GI6323947, Length=357, Percent_Identity=34.453781512605, Blast_Score=189, Evalue=9e-49,
Organism=Saccharomyces cerevisiae, GI6320224, Length=375, Percent_Identity=30.9333333333333, Blast_Score=181, Evalue=2e-46,
Organism=Saccharomyces cerevisiae, GI6320449, Length=382, Percent_Identity=31.413612565445, Blast_Score=180, Evalue=4e-46,
Organism=Saccharomyces cerevisiae, GI6322912, Length=385, Percent_Identity=33.2467532467532, Blast_Score=178, Evalue=1e-45,
Organism=Saccharomyces cerevisiae, GI6322323, Length=385, Percent_Identity=33.2467532467532, Blast_Score=178, Evalue=1e-45,
Organism=Saccharomyces cerevisiae, GI6322427, Length=358, Percent_Identity=33.5195530726257, Blast_Score=178, Evalue=2e-45,
Organism=Saccharomyces cerevisiae, GI6324620, Length=378, Percent_Identity=30.952380952381, Blast_Score=169, Evalue=6e-43,
Organism=Saccharomyces cerevisiae, GI6320400, Length=374, Percent_Identity=33.6898395721925, Blast_Score=168, Evalue=2e-42,
Organism=Saccharomyces cerevisiae, GI6320173, Length=435, Percent_Identity=30.5747126436782, Blast_Score=162, Evalue=1e-40,
Organism=Saccharomyces cerevisiae, GI6321111, Length=367, Percent_Identity=31.0626702997275, Blast_Score=161, Evalue=2e-40,
Organism=Saccharomyces cerevisiae, GI6320119, Length=357, Percent_Identity=28.8515406162465, Blast_Score=154, Evalue=2e-38,
Organism=Saccharomyces cerevisiae, GI6321963, Length=385, Percent_Identity=29.8701298701299, Blast_Score=153, Evalue=5e-38,
Organism=Saccharomyces cerevisiae, GI6321267, Length=374, Percent_Identity=31.0160427807487, Blast_Score=153, Evalue=5e-38,
Organism=Saccharomyces cerevisiae, GI6319714, Length=361, Percent_Identity=29.9168975069252, Blast_Score=149, Evalue=6e-37,
Organism=Saccharomyces cerevisiae, GI6319618, Length=419, Percent_Identity=28.1622911694511, Blast_Score=137, Evalue=2e-33,
Organism=Saccharomyces cerevisiae, GI6323306, Length=422, Percent_Identity=24.6445497630332, Blast_Score=127, Evalue=4e-30,
Organism=Saccharomyces cerevisiae, GI6322876, Length=400, Percent_Identity=28.5, Blast_Score=119, Evalue=9e-28,
Organism=Saccharomyces cerevisiae, GI6324366, Length=349, Percent_Identity=27.5071633237822, Blast_Score=112, Evalue=9e-26,
Organism=Drosophila melanogaster, GI24584399, Length=358, Percent_Identity=36.5921787709497, Blast_Score=234, Evalue=1e-61,
Organism=Drosophila melanogaster, GI17985987, Length=370, Percent_Identity=37.027027027027, Blast_Score=230, Evalue=2e-60,
Organism=Drosophila melanogaster, GI21356161, Length=358, Percent_Identity=37.7094972067039, Blast_Score=228, Evalue=5e-60,
Organism=Drosophila melanogaster, GI24662330, Length=359, Percent_Identity=36.2116991643454, Blast_Score=216, Evalue=2e-56,
Organism=Drosophila melanogaster, GI24584994, Length=375, Percent_Identity=36, Blast_Score=215, Evalue=5e-56,
Organism=Drosophila melanogaster, GI24644479, Length=370, Percent_Identity=35.6756756756757, Blast_Score=213, Evalue=2e-55,
Organism=Drosophila melanogaster, GI281361218, Length=370, Percent_Identity=35.6756756756757, Blast_Score=213, Evalue=2e-55,
Organism=Drosophila melanogaster, GI24644481, Length=370, Percent_Identity=35.6756756756757, Blast_Score=213, Evalue=2e-55,
Organism=Drosophila melanogaster, GI24644483, Length=370, Percent_Identity=35.6756756756757, Blast_Score=213, Evalue=3e-55,
Organism=Drosophila melanogaster, GI24644487, Length=370, Percent_Identity=35.6756756756757, Blast_Score=213, Evalue=3e-55,
Organism=Drosophila melanogaster, GI45551833, Length=370, Percent_Identity=35.6756756756757, Blast_Score=213, Evalue=3e-55,
Organism=Drosophila melanogaster, GI24644485, Length=370, Percent_Identity=35.6756756756757, Blast_Score=213, Evalue=3e-55,
Organism=Drosophila melanogaster, GI21355075, Length=372, Percent_Identity=38.1720430107527, Blast_Score=211, Evalue=7e-55,
Organism=Drosophila melanogaster, GI18857967, Length=362, Percent_Identity=37.5690607734807, Blast_Score=211, Evalue=9e-55,
Organism=Drosophila melanogaster, GI28574962, Length=345, Percent_Identity=37.9710144927536, Blast_Score=209, Evalue=3e-54,
Organism=Drosophila melanogaster, GI24642151, Length=361, Percent_Identity=36.8421052631579, Blast_Score=208, Evalue=5e-54,
Organism=Drosophila melanogaster, GI17977678, Length=357, Percent_Identity=33.0532212885154, Blast_Score=201, Evalue=8e-52,
Organism=Drosophila melanogaster, GI24645031, Length=372, Percent_Identity=32.7956989247312, Blast_Score=200, Evalue=2e-51,
Organism=Drosophila melanogaster, GI24585582, Length=422, Percent_Identity=30.0947867298578, Blast_Score=193, Evalue=2e-49,
Organism=Drosophila melanogaster, GI24642822, Length=421, Percent_Identity=31.8289786223278, Blast_Score=180, Evalue=2e-45,
Organism=Drosophila melanogaster, GI28575014, Length=386, Percent_Identity=29.5336787564767, Blast_Score=176, Evalue=3e-44,
Organism=Drosophila melanogaster, GI19920478, Length=338, Percent_Identity=32.8402366863905, Blast_Score=175, Evalue=6e-44,
Organism=Drosophila melanogaster, GI24583279, Length=364, Percent_Identity=29.9450549450549, Blast_Score=173, Evalue=3e-43,
Organism=Drosophila melanogaster, GI24583281, Length=364, Percent_Identity=29.9450549450549, Blast_Score=172, Evalue=3e-43,
Organism=Drosophila melanogaster, GI28571808, Length=343, Percent_Identity=34.1107871720117, Blast_Score=171, Evalue=7e-43,
Organism=Drosophila melanogaster, GI28571809, Length=343, Percent_Identity=34.1107871720117, Blast_Score=171, Evalue=7e-43,
Organism=Drosophila melanogaster, GI24581954, Length=357, Percent_Identity=31.6526610644258, Blast_Score=170, Evalue=2e-42,
Organism=Drosophila melanogaster, GI24581952, Length=357, Percent_Identity=31.6526610644258, Blast_Score=170, Evalue=2e-42,
Organism=Drosophila melanogaster, GI24581956, Length=357, Percent_Identity=31.6526610644258, Blast_Score=170, Evalue=2e-42,
Organism=Drosophila melanogaster, GI24582080, Length=382, Percent_Identity=30.6282722513089, Blast_Score=169, Evalue=4e-42,
Organism=Drosophila melanogaster, GI24582078, Length=382, Percent_Identity=30.6282722513089, Blast_Score=169, Evalue=4e-42,
Organism=Drosophila melanogaster, GI17136248, Length=382, Percent_Identity=30.6282722513089, Blast_Score=169, Evalue=4e-42,
Organism=Drosophila melanogaster, GI24582075, Length=382, Percent_Identity=30.6282722513089, Blast_Score=169, Evalue=4e-42,
Organism=Drosophila melanogaster, GI24666101, Length=373, Percent_Identity=29.2225201072386, Blast_Score=166, Evalue=3e-41,
Organism=Drosophila melanogaster, GI20130173, Length=425, Percent_Identity=31.2941176470588, Blast_Score=165, Evalue=6e-41,
Organism=Drosophila melanogaster, GI281365720, Length=306, Percent_Identity=36.2745098039216, Blast_Score=164, Evalue=1e-40,
Organism=Drosophila melanogaster, GI17136814, Length=347, Percent_Identity=31.4121037463977, Blast_Score=162, Evalue=4e-40,
Organism=Drosophila melanogaster, GI24643725, Length=396, Percent_Identity=29.7979797979798, Blast_Score=162, Evalue=5e-40,
Organism=Drosophila melanogaster, GI17647335, Length=359, Percent_Identity=30.9192200557103, Blast_Score=157, Evalue=9e-39,
Organism=Drosophila melanogaster, GI21355559, Length=393, Percent_Identity=30.7888040712468, Blast_Score=149, Evalue=4e-36,
Organism=Drosophila melanogaster, GI24668515, Length=327, Percent_Identity=29.0519877675841, Blast_Score=123, Evalue=2e-28,
Organism=Drosophila melanogaster, GI17136666, Length=418, Percent_Identity=25.5980861244019, Blast_Score=109, Evalue=5e-24,
Organism=Drosophila melanogaster, GI18859659, Length=196, Percent_Identity=32.6530612244898, Blast_Score=102, Evalue=4e-22,
Organism=Drosophila melanogaster, GI28571338, Length=196, Percent_Identity=32.6530612244898, Blast_Score=102, Evalue=4e-22,
Organism=Drosophila melanogaster, GI24640164, Length=353, Percent_Identity=23.7960339943343, Blast_Score=99, Evalue=5e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 48993; Mature: 48861

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTHLSTQKFADFPLHKEVHQALNEAGFEFCTPIQALSLPILLEKKDIAGQAQTGTGKT
CCCCCCCHHHHHCCCCHHHHHHHHHHCCCHHHCCHHHHCCCEEEECCCCCCCCCCCCCHH
LAFLVATFNHLLSTPIPAERQLNQPRAIIMAPTRELAIQIAKDANLLAKHTGLKVGIVYG
HHHHHHHHHHHHCCCCCCHHHCCCCCEEEEECCHHHHEEHHCCCHHHHHHCCCEEEEEEC
GEGYEVQRKVLDKGVDILIGTTGRIIDYVRQGVINVSCIQAVVLDEADRMFDLGFIKDIR
CCCHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHH
FLFRRMPDAKSRLNMLFSATLSMKVQELAYDHMNEPEKVEIAPNEKTSKNIKEEIFYPSM
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCCH
EEKMPLLLSLLEEDWPEKAIVFSNTKHSCEKVWSWLEGDGHRAGLLTGDVPQKKRLRILE
HHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHH
QFTKGEIDILVATDVAARGLHIADVSHVYNYDLPDDCEDYVHRIGRTGRAGQKGISVSFA
HHCCCCEEEEEECCHHHCCEEEEEHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEE
CEEYALNLPAIESYIQHSIPVTSYDSDALLDDIPPPVRIHRKPSTHTRNTRDRGASRPQG
HHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHCCCCCCEEECCCCCCCCCCHHCCCCCCCC
GQRSGPRRHDRTRRHS
CCCCCCCHHHHHCCCC
>Mature Secondary Structure 
SDTHLSTQKFADFPLHKEVHQALNEAGFEFCTPIQALSLPILLEKKDIAGQAQTGTGKT
CCCCCCHHHHHCCCCHHHHHHHHHHCCCHHHCCHHHHCCCEEEECCCCCCCCCCCCCHH
LAFLVATFNHLLSTPIPAERQLNQPRAIIMAPTRELAIQIAKDANLLAKHTGLKVGIVYG
HHHHHHHHHHHHCCCCCCHHHCCCCCEEEEECCHHHHEEHHCCCHHHHHHCCCEEEEEEC
GEGYEVQRKVLDKGVDILIGTTGRIIDYVRQGVINVSCIQAVVLDEADRMFDLGFIKDIR
CCCHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHH
FLFRRMPDAKSRLNMLFSATLSMKVQELAYDHMNEPEKVEIAPNEKTSKNIKEEIFYPSM
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCCH
EEKMPLLLSLLEEDWPEKAIVFSNTKHSCEKVWSWLEGDGHRAGLLTGDVPQKKRLRILE
HHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHH
QFTKGEIDILVATDVAARGLHIADVSHVYNYDLPDDCEDYVHRIGRTGRAGQKGISVSFA
HHCCCCEEEEEECCHHHCCEEEEEHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEE
CEEYALNLPAIESYIQHSIPVTSYDSDALLDDIPPPVRIHRKPSTHTRNTRDRGASRPQG
HHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHCCCCCCEEECCCCCCCCCCHHCCCCCCCC
GQRSGPRRHDRTRRHS
CCCCCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA