Click here to switch to the map view.

The map label for this gene is 167625761

Identifier: 167625761

GI number: 167625761

Start: 4677329

End: 4677937

Strand: Reverse

Name: 167625761

Synonym: Shal_3856

Alternate gene names: NA

Gene position: 4677937-4677329 (Counterclockwise)

Preceding gene: 167625762

Following gene: 167625760

Centisome position: 89.5

GC content: 43.02

Gene sequence:

>609_bases
ATGAAATTAAGAGTCAATCTTTATTCTGATTCACTATTTCCGCCAGAGCTGCGGTTATCTTTTTTAAAGTTAAGCCAAGT
CATGCTCATCGTTGTGGTCGTATTATTGTTATCGAGCGTGGCGGTGTTCGCATTGAACTCTAGCCTTGAATCTGACAAGA
CACAGCTTATGCAAGATAAGCAGCGCCTCGATTCAGATAAAAAAGATCTCGAGGCAGCATTAGCTAAGCGGGGACCAAGT
AAAGCATTGGTCGCTGAGGTGGAGTTGAAAGCCCAGCAGCTGGAACTTAAGCAAAAGTTATTCGGCAAACTGAGTCAGCA
AGAAGTGCTCACTAGCTATGGCTATTCACCACTAATGACCGATCTTGCTAGCGTTGCTGATTCGAGTATTTGGTTAAACC
GTATTCAGGTTAATGAGAAAAGTTATATTTTCGAAGGTTTTACCTCTAGCCCTGAAAGTGTGCCGTTATGGATTGAACGC
TTAAAAACAACCACGACTCTCAAAGGTCATGCTTTTGCAACTATGACGATGAATCTCGGTGAAAACCAGCCGCTTGCCTT
TAAGTTGACAAGCGATGCGACTCCTACCGGTAAGGAGTTGATTAAATGA

Upstream 100 bases:

>100_bases
GTGCCAATTTTGATCAAAGCGTTACGCCTCATAACGGCGCATCGGTTGAAGTTGTATTTGCCGAGTTAGCACTAGCTGAA
ATTGCGCGAGGTGAAGTGCA

Downstream 100 bases:

>100_bases
AGCAGCAGTGGAATAAGTTAGCCGAAAAATTTGACGCCTTAAGTCAGCGTGAAAGAGTCTTGGTTGCAGCCGCAGCGCTG
ATCGTTGCTGGTTTACTGTT

Product: fimbrial assembly family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MKLRVNLYSDSLFPPELRLSFLKLSQVMLIVVVVLLLSSVAVFALNSSLESDKTQLMQDKQRLDSDKKDLEAALAKRGPS
KALVAEVELKAQQLELKQKLFGKLSQQEVLTSYGYSPLMTDLASVADSSIWLNRIQVNEKSYIFEGFTSSPESVPLWIER
LKTTTTLKGHAFATMTMNLGENQPLAFKLTSDATPTGKELIK

Sequences:

>Translated_202_residues
MKLRVNLYSDSLFPPELRLSFLKLSQVMLIVVVVLLLSSVAVFALNSSLESDKTQLMQDKQRLDSDKKDLEAALAKRGPS
KALVAEVELKAQQLELKQKLFGKLSQQEVLTSYGYSPLMTDLASVADSSIWLNRIQVNEKSYIFEGFTSSPESVPLWIER
LKTTTTLKGHAFATMTMNLGENQPLAFKLTSDATPTGKELIK
>Mature_202_residues
MKLRVNLYSDSLFPPELRLSFLKLSQVMLIVVVVLLLSSVAVFALNSSLESDKTQLMQDKQRLDSDKKDLEAALAKRGPS
KALVAEVELKAQQLELKQKLFGKLSQQEVLTSYGYSPLMTDLASVADSSIWLNRIQVNEKSYIFEGFTSSPESVPLWIER
LKTTTTLKGHAFATMTMNLGENQPLAFKLTSDATPTGKELIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22513; Mature: 22513

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLRVNLYSDSLFPPELRLSFLKLSQVMLIVVVVLLLSSVAVFALNSSLESDKTQLMQDK
CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
QRLDSDKKDLEAALAKRGPSKALVAEVELKAQQLELKQKLFGKLSQQEVLTSYGYSPLMT
HHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHH
DLASVADSSIWLNRIQVNEKSYIFEGFTSSPESVPLWIERLKTTTTLKGHAFATMTMNLG
HHHHHHCCHHHHHHEEECCCCEEEECCCCCCCCCHHHHHHHHHHCEECCCEEEEEEEECC
ENQPLAFKLTSDATPTGKELIK
CCCCEEEEEECCCCCCHHHHCC
>Mature Secondary Structure
MKLRVNLYSDSLFPPELRLSFLKLSQVMLIVVVVLLLSSVAVFALNSSLESDKTQLMQDK
CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
QRLDSDKKDLEAALAKRGPSKALVAEVELKAQQLELKQKLFGKLSQQEVLTSYGYSPLMT
HHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHH
DLASVADSSIWLNRIQVNEKSYIFEGFTSSPESVPLWIERLKTTTTLKGHAFATMTMNLG
HHHHHHCCHHHHHHEEECCCCEEEECCCCCCCCCHHHHHHHHHHCEECCCEEEEEEEECC
ENQPLAFKLTSDATPTGKELIK
CCCCEEEEEECCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA