The gene/protein map for NC_010334 is currently unavailable.
Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

Click here to switch to the map view.

The map label for this gene is 167625715

Identifier: 167625715

GI number: 167625715

Start: 4625788

End: 4626312

Strand: Reverse

Name: 167625715

Synonym: Shal_3810

Alternate gene names: NA

Gene position: 4626312-4625788 (Counterclockwise)

Preceding gene: 167625718

Following gene: 167625713

Centisome position: 88.51

GC content: 41.14

Gene sequence:

>525_bases
ATGAAGGTTAAACATTTACTGGTAGCGGGTTTACTTGCATCTAGCTCAGCTTGGGCGACAGATGAAGTGGTTGAAAACCC
GATTACTGAAGAAGGCGTGGTAAAAGTGGAATGGCAAGACCCTAGCAACTTTCGTGACGTTGAATCTAGCGGTGATATTC
AATCTCGTTTCGAAAAGCGTACCTTCGAGCAGTTGACCAAGAGTTTAAACAAGGAAGCTGCGAAGATCCTTAAGCCAGAA
CAGAAGCTTGAGATGGTGGTGACTGATTTAGATTTAGCGGGTGACGTTAGGCCTACATTTGGTGCAACTACGAATGATCT
TCGAATCGTAAAGAATATCTATCCGCCACGCATTACCTTTAGCTATAAGATTCTTGAAGGCGATAAAGTGATTATGGCTG
GTGATGAGAAGCTAACAGATTTAAACTTTATGTATTCAATCAATAAGATGAATGACAAGCCTTATCGTTATGAAAATGAG
CTACTAGCGTCTTGGCTTAAAAAAACGGTGAAGCCAAACCTTTAA

Upstream 100 bases:

>100_bases
GTTAGAGTGTTAACTGCCTAACGATACTAGATTAAGTTTCGATACAGGTTCACTATTGTATAGTTCAATCATCCTATCAT
GCTCAACAGTGGAGGCACAT

Downstream 100 bases:

>100_bases
CTTGCTTGATTCTTAGTTATTAGCGCCGTAAACCCTGAGCATGGCTTATAGACTCATTGCAGTCTTCAATATAAATAGGC
TAAGTGAGCTTTCTGCTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MKVKHLLVAGLLASSSAWATDEVVENPITEEGVVKVEWQDPSNFRDVESSGDIQSRFEKRTFEQLTKSLNKEAAKILKPE
QKLEMVVTDLDLAGDVRPTFGATTNDLRIVKNIYPPRITFSYKILEGDKVIMAGDEKLTDLNFMYSINKMNDKPYRYENE
LLASWLKKTVKPNL

Sequences:

>Translated_174_residues
MKVKHLLVAGLLASSSAWATDEVVENPITEEGVVKVEWQDPSNFRDVESSGDIQSRFEKRTFEQLTKSLNKEAAKILKPE
QKLEMVVTDLDLAGDVRPTFGATTNDLRIVKNIYPPRITFSYKILEGDKVIMAGDEKLTDLNFMYSINKMNDKPYRYENE
LLASWLKKTVKPNL
>Mature_174_residues
MKVKHLLVAGLLASSSAWATDEVVENPITEEGVVKVEWQDPSNFRDVESSGDIQSRFEKRTFEQLTKSLNKEAAKILKPE
QKLEMVVTDLDLAGDVRPTFGATTNDLRIVKNIYPPRITFSYKILEGDKVIMAGDEKLTDLNFMYSINKMNDKPYRYENE
LLASWLKKTVKPNL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19841; Mature: 19841

Theoretical pI: Translated: 5.41; Mature: 5.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVKHLLVAGLLASSSAWATDEVVENPITEEGVVKVEWQDPSNFRDVESSGDIQSRFEKR
CCHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHH
TFEQLTKSLNKEAAKILKPEQKLEMVVTDLDLAGDVRPTFGATTNDLRIVKNIYPPRITF
HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEE
SYKILEGDKVIMAGDEKLTDLNFMYSINKMNDKPYRYENELLASWLKKTVKPNL
EEEEECCCEEEEECCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKVKHLLVAGLLASSSAWATDEVVENPITEEGVVKVEWQDPSNFRDVESSGDIQSRFEKR
CCHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHH
TFEQLTKSLNKEAAKILKPEQKLEMVVTDLDLAGDVRPTFGATTNDLRIVKNIYPPRITF
HHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCEEE
SYKILEGDKVIMAGDEKLTDLNFMYSINKMNDKPYRYENELLASWLKKTVKPNL
EEEEECCCEEEEECCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA