Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167625718

Identifier: 167625718

GI number: 167625718

Start: 4627745

End: 4628254

Strand: Reverse

Name: 167625718

Synonym: Shal_3813

Alternate gene names: NA

Gene position: 4628254-4627745 (Counterclockwise)

Preceding gene: 167625724

Following gene: 167625715

Centisome position: 88.55

GC content: 43.53

Gene sequence:

>510_bases
ATGACAGAGTCTGAGTTTTGGGAGTTAGTCACCCGAACATCACCACAACAAGATCAAACAGAACTTGCTGAAGCGCTTAA
GCAAAAGCTGAGCCCATTAAGTAATGAAGAGTTGCGAGACTTTGATAAGATATTTGGTCAGCAGATGCGTCGTTCGTACT
CTTGGGCTGTTTGGGGCGCGGCTTACATTATTACTGGCTGTGATTCAGAGTATGCTTTTGCCGAGTTTCGTTGCTTCTTA
ATTTCATTAGGCAAAGATTGGTACGACAAAGTGGTCGAATCGCCTGATGAATTAGGCTTATTAGCACTTTGGCCTGAAAA
AGATGGCTATGCCTATCCTTTTGTTGATGAATACGATCTTATTGCGGGTCAGCTTTATGAAGATCGTAGCGATGATGAGC
TCCCTTATGTGCCATCGGGACAGGCAAACCCCGCGGGGAAAAAGTTCTCTCATAAGAAAAAATTACTTAAAGCGGCTTAT
CCACAGTTAAGTGCAGCATTCCCGTTTTAA

Upstream 100 bases:

>100_bases
TGGGGTTAATTGGCTTAATCGATGGGTGAGATTGTTTAGCTAAGATGACGGGTAATGCGATAGAATAGCAACCATTACTG
CGTACAATTTAGAGAATCCG

Downstream 100 bases:

>100_bases
GGTAAAACGATTACGTAAATAGCAAAACGAGGCCCCTTGGCCTCGTTTTTTGTTGGGCAATTTGCCCGCGAATTGCGACT
TATCATGGATTCTTGTTAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 169; Mature: 168

Protein sequence:

>169_residues
MTESEFWELVTRTSPQQDQTELAEALKQKLSPLSNEELRDFDKIFGQQMRRSYSWAVWGAAYIITGCDSEYAFAEFRCFL
ISLGKDWYDKVVESPDELGLLALWPEKDGYAYPFVDEYDLIAGQLYEDRSDDELPYVPSGQANPAGKKFSHKKKLLKAAY
PQLSAAFPF

Sequences:

>Translated_169_residues
MTESEFWELVTRTSPQQDQTELAEALKQKLSPLSNEELRDFDKIFGQQMRRSYSWAVWGAAYIITGCDSEYAFAEFRCFL
ISLGKDWYDKVVESPDELGLLALWPEKDGYAYPFVDEYDLIAGQLYEDRSDDELPYVPSGQANPAGKKFSHKKKLLKAAY
PQLSAAFPF
>Mature_168_residues
TESEFWELVTRTSPQQDQTELAEALKQKLSPLSNEELRDFDKIFGQQMRRSYSWAVWGAAYIITGCDSEYAFAEFRCFLI
SLGKDWYDKVVESPDELGLLALWPEKDGYAYPFVDEYDLIAGQLYEDRSDDELPYVPSGQANPAGKKFSHKKKLLKAAYP
QLSAAFPF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19405; Mature: 19274

Theoretical pI: Translated: 4.35; Mature: 4.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTESEFWELVTRTSPQQDQTELAEALKQKLSPLSNEELRDFDKIFGQQMRRSYSWAVWGA
CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHH
AYIITGCDSEYAFAEFRCFLISLGKDWYDKVVESPDELGLLALWPEKDGYAYPFVDEYDL
EEEEECCCCCHHHHHHHHHHHHHCHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCHHH
IAGQLYEDRSDDELPYVPSGQANPAGKKFSHKKKLLKAAYPQLSAAFPF
HHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHCCCCC
>Mature Secondary Structure 
TESEFWELVTRTSPQQDQTELAEALKQKLSPLSNEELRDFDKIFGQQMRRSYSWAVWGA
CHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHH
AYIITGCDSEYAFAEFRCFLISLGKDWYDKVVESPDELGLLALWPEKDGYAYPFVDEYDL
EEEEECCCCCHHHHHHHHHHHHHCHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCHHH
IAGQLYEDRSDDELPYVPSGQANPAGKKFSHKKKLLKAAYPQLSAAFPF
HHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA