| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is 167625712
Identifier: 167625712
GI number: 167625712
Start: 4623444
End: 4624310
Strand: Reverse
Name: 167625712
Synonym: Shal_3807
Alternate gene names: NA
Gene position: 4624310-4623444 (Counterclockwise)
Preceding gene: 167625713
Following gene: 167625711
Centisome position: 88.47
GC content: 46.02
Gene sequence:
>867_bases TTGAATAAAGAATACTGTATCGATTTAAAGGCGTTGCCTTCGCTATTCACGCTTTATCGCAAAATATTTTTTGGACGCAA GCCCGGCTGGGACGAGCAGCCATTGCCGATGGTCAAGGTGACGAGCCAAAACGTATCGCTATCATCAGACAAGGTGGTGC AATACTCAAAAGTGTGTGGCTTTGATTTTGACGGAAACACGCTACCGCCAACCTATCTGTATGTGATGGCATTTCGATTA CATGCGGCAATTTTTACCCATGAAGCGATCACCTTCCCACTGCTTGGGATGATCCACTTAAAAAATAGCATAACTATGTA TCGTAGTGCTCGCGTGGATGAGAAGTTCGAGATCCAATGCGCGCTAACCACGAGTCGTATGACAGATTCAGGTCTTGAGT TCGAGTTAGTCTCTAAAGCGTATGTGGGCAGCGAGCTTGTATGGGAGTCGCTATCAACTTATCTATATCGTATCGAAGGT AAGGCAAAGCGAATTCGTCCACCTAAAGCCAATGATATGGCTTGGCAAGAACCTGTAAGCTGGAGCTTGGCCGAAGATCT TGGTCGTCGTTATGCTAAGGCCTCCGGTGACTATAATCTTATTCATTTACACCCTGTGATGTCTAAGCGCTTTGGTTTTG ATCGTGTATTGGCTCATGGAATGTGGTCAAAAGGACGCTGTATTGCCCAGTTGATGCCGAGCATTGGCGAGCGCGCCTGT CAGATCGATGTGGCATTTAAGCTACCGCTGTTTATGCCTAACAGTGTTAGCTTTGCGGCCGAACAGCAGGAAGATAAAAC CGTATTTGAACTCAGAGATCAAAAGGGACGTCGTCCACATCTGAGTGGCGAAATTACCTTTTTATAA
Upstream 100 bases:
>100_bases TAACACAGCTTGCTAGTGCGATTATCGGGTTTGGTCATTTTGATGTATAATATGGCGCTTGTTTTGGGTTCCTCGTGTCA TTTCAAAAGGTTTTATCGGT
Downstream 100 bases:
>100_bases ACATCAATGATGATAAATTAAGGCGCTTTAAGCGTCTTTTTTGTATGAGAAATTTAAGTTTAGCCCCGCTATTTGGGGCA TCATGAAAAAGCCTCATCAA
Product: dehydratase
Products: NA
Alternate protein names: MaoC Domain Protein Dehydratase; Acyl Dehydratase; MaoC-Like Dehydratase; MaoC Domain-Containing Protein Dehydratase; MaoC Domain-Containing Protein; MaoC Like Domain-Containing Protein; MaoC-Like Domain-Containing Protein; MaoC-Like Protein; MaoC-Like Domain Protein; Enoyl-CoA Hydratase; Conserved Hypothethical Protein MaoC Domain Protein; Maoc Domain Protein Dehydratase; Dehydrogenase; Maoc Domain Protein
Number of amino acids: Translated: 288; Mature: 288
Protein sequence:
>288_residues MNKEYCIDLKALPSLFTLYRKIFFGRKPGWDEQPLPMVKVTSQNVSLSSDKVVQYSKVCGFDFDGNTLPPTYLYVMAFRL HAAIFTHEAITFPLLGMIHLKNSITMYRSARVDEKFEIQCALTTSRMTDSGLEFELVSKAYVGSELVWESLSTYLYRIEG KAKRIRPPKANDMAWQEPVSWSLAEDLGRRYAKASGDYNLIHLHPVMSKRFGFDRVLAHGMWSKGRCIAQLMPSIGERAC QIDVAFKLPLFMPNSVSFAAEQQEDKTVFELRDQKGRRPHLSGEITFL
Sequences:
>Translated_288_residues MNKEYCIDLKALPSLFTLYRKIFFGRKPGWDEQPLPMVKVTSQNVSLSSDKVVQYSKVCGFDFDGNTLPPTYLYVMAFRL HAAIFTHEAITFPLLGMIHLKNSITMYRSARVDEKFEIQCALTTSRMTDSGLEFELVSKAYVGSELVWESLSTYLYRIEG KAKRIRPPKANDMAWQEPVSWSLAEDLGRRYAKASGDYNLIHLHPVMSKRFGFDRVLAHGMWSKGRCIAQLMPSIGERAC QIDVAFKLPLFMPNSVSFAAEQQEDKTVFELRDQKGRRPHLSGEITFL >Mature_288_residues MNKEYCIDLKALPSLFTLYRKIFFGRKPGWDEQPLPMVKVTSQNVSLSSDKVVQYSKVCGFDFDGNTLPPTYLYVMAFRL HAAIFTHEAITFPLLGMIHLKNSITMYRSARVDEKFEIQCALTTSRMTDSGLEFELVSKAYVGSELVWESLSTYLYRIEG KAKRIRPPKANDMAWQEPVSWSLAEDLGRRYAKASGDYNLIHLHPVMSKRFGFDRVLAHGMWSKGRCIAQLMPSIGERAC QIDVAFKLPLFMPNSVSFAAEQQEDKTVFELRDQKGRRPHLSGEITFL
Specific function: Unknown
COG id: COG2030
COG function: function code I; Acyl dehydratase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32958; Mature: 32958
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKEYCIDLKALPSLFTLYRKIFFGRKPGWDEQPLPMVKVTSQNVSLSSDKVVQYSKVCG CCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHCC FDFDGNTLPPTYLYVMAFRLHAAIFTHEAITFPLLGMIHLKNSITMYRSARVDEKFEIQC CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCEEEEE ALTTSRMTDSGLEFELVSKAYVGSELVWESLSTYLYRIEGKAKRIRPPKANDMAWQEPVS EEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHEEECCCHHHCCCCCCCCCCCCCCCC WSLAEDLGRRYAKASGDYNLIHLHPVMSKRFGFDRVLAHGMWSKGRCIAQLMPSIGERAC HHHHHHHHHHHHHCCCCEEEEEECHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHCCHHE QIDVAFKLPLFMPNSVSFAAEQQEDKTVFELRDQKGRRPHLSGEITFL EEEEEEEECEECCCCCCHHHHCCCCHHHHHHHHCCCCCCCCCCEEEEC >Mature Secondary Structure MNKEYCIDLKALPSLFTLYRKIFFGRKPGWDEQPLPMVKVTSQNVSLSSDKVVQYSKVCG CCCCEEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHCC FDFDGNTLPPTYLYVMAFRLHAAIFTHEAITFPLLGMIHLKNSITMYRSARVDEKFEIQC CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCEEEEE ALTTSRMTDSGLEFELVSKAYVGSELVWESLSTYLYRIEGKAKRIRPPKANDMAWQEPVS EEEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHEEECCCHHHCCCCCCCCCCCCCCCC WSLAEDLGRRYAKASGDYNLIHLHPVMSKRFGFDRVLAHGMWSKGRCIAQLMPSIGERAC HHHHHHHHHHHHHCCCCEEEEEECHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHCCHHE QIDVAFKLPLFMPNSVSFAAEQQEDKTVFELRDQKGRRPHLSGEITFL EEEEEEEECEECCCCCCHHHHCCCCHHHHHHHHCCCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA