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The map label for this gene is 167625680

Identifier: 167625680

GI number: 167625680

Start: 4584186

End: 4584998

Strand: Reverse

Name: 167625680

Synonym: Shal_3775

Alternate gene names: NA

Gene position: 4584998-4584186 (Counterclockwise)

Preceding gene: 167625681

Following gene: 167625674

Centisome position: 87.72

GC content: 34.07

Gene sequence:

>813_bases
ATGCAACTTAACGCTCGATTTTATGAGACTTATTATTTTTGCAATGTAATCAACAATGTATTGAATGACTCTTTTACCTA
TGCTGTAGAGTTAAATGACTTCTACGGTGATGGGCGAGTTTTTAGTTTAATTGATAAGTTCCCAAAGCAGTCCGTTTTCC
ATAGCTTTATTACATTCGTAGTCGAAACCATTTATTCCGAGAATTCAAATAAAATTGATTTTGATAACTTTGATTACAGG
AGTAGTGGTTTACTTCCAATAGAAAAAGCTTTCGAGTATCACGGTATAAAGTATCAGCTATTTAAAGAGCATCTAAAAGA
GCTGTGTTCTTTAAAAGATGTATTTATAGAGGATGCTTATTATGATTGGTTACTTGCTTCCCAGTACTATGAAGACTTAA
TCACGCAGACGGTGGAAGAAGTTTTCTATCTATTATTTCTTAATAGAGAGCTTTTACTTAATTTTAATCAAATTATGGCT
GATAGCCTTGAGATGCAAGCTAGTGATGTAAGTGTTCATGTTCATTTGAATGATCTACTGACTACTCGGTGTAAAAATAA
GCGTTGTCATATTCCCCAGTGGGCTAAAAGAGCTGTGTACTTCAGAGATCGAGGAAGGTGTGTTCTTTGCGATAAAGACT
TATCTGGTAAATTAAATATTAATAACCTCGAAAACTATGATCATATGGTTGCACTTGCTAATTACGGCTTTAATGATGTC
ACAAATCTTCAGCTTTTATGTAAGGAATGCAATCAAAATACTAAAAGCGCGGGCGTTGGCTCTACATCAAATAGTTATCA
AGGGTGGTATTAA

Upstream 100 bases:

>100_bases
GTTAAGGCTACCGTGTTGACACCAATGTTGACCCCAACGGTAGCCTTTTTGTTTATAGGTAGCAAGATAAAAGTAAGTTT
GTTTTTTAAAGGAAGAAGGA

Downstream 100 bases:

>100_bases
CAGCCATAGGGGGGGGAGGTGAGGTATTAACTCTTCCTTACTATTGCGGCGTTCCCTTATTTGTACACAAAACGTGTTTT
ACAAATGTTCATTTTTTATG

Product: HNH endonuclease

Products: NA

Alternate protein names: HNH Endonuclease; HNH Endonuclease Domain Protein

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MQLNARFYETYYFCNVINNVLNDSFTYAVELNDFYGDGRVFSLIDKFPKQSVFHSFITFVVETIYSENSNKIDFDNFDYR
SSGLLPIEKAFEYHGIKYQLFKEHLKELCSLKDVFIEDAYYDWLLASQYYEDLITQTVEEVFYLLFLNRELLLNFNQIMA
DSLEMQASDVSVHVHLNDLLTTRCKNKRCHIPQWAKRAVYFRDRGRCVLCDKDLSGKLNINNLENYDHMVALANYGFNDV
TNLQLLCKECNQNTKSAGVGSTSNSYQGWY

Sequences:

>Translated_270_residues
MQLNARFYETYYFCNVINNVLNDSFTYAVELNDFYGDGRVFSLIDKFPKQSVFHSFITFVVETIYSENSNKIDFDNFDYR
SSGLLPIEKAFEYHGIKYQLFKEHLKELCSLKDVFIEDAYYDWLLASQYYEDLITQTVEEVFYLLFLNRELLLNFNQIMA
DSLEMQASDVSVHVHLNDLLTTRCKNKRCHIPQWAKRAVYFRDRGRCVLCDKDLSGKLNINNLENYDHMVALANYGFNDV
TNLQLLCKECNQNTKSAGVGSTSNSYQGWY
>Mature_270_residues
MQLNARFYETYYFCNVINNVLNDSFTYAVELNDFYGDGRVFSLIDKFPKQSVFHSFITFVVETIYSENSNKIDFDNFDYR
SSGLLPIEKAFEYHGIKYQLFKEHLKELCSLKDVFIEDAYYDWLLASQYYEDLITQTVEEVFYLLFLNRELLLNFNQIMA
DSLEMQASDVSVHVHLNDLLTTRCKNKRCHIPQWAKRAVYFRDRGRCVLCDKDLSGKLNINNLENYDHMVALANYGFNDV
TNLQLLCKECNQNTKSAGVGSTSNSYQGWY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31713; Mature: 31713

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLNARFYETYYFCNVINNVLNDSFTYAVELNDFYGDGRVFSLIDKFPKQSVFHSFITFV
CCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHCCHHHHHHHHHHHH
VETIYSENSNKIDFDNFDYRSSGLLPIEKAFEYHGIKYQLFKEHLKELCSLKDVFIEDAY
HHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
YDWLLASQYYEDLITQTVEEVFYLLFLNRELLLNFNQIMADSLEMQASDVSVHVHLNDLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHEEECCEEEEEEHHHHH
TTRCKNKRCHIPQWAKRAVYFRDRGRCVLCDKDLSGKLNINNLENYDHMVALANYGFNDV
HHHHCCCCCCCCHHHHHHEEEECCCCEEEECCCCCCCEECCCCCCCHHEEEEECCCCCCH
TNLQLLCKECNQNTKSAGVGSTSNSYQGWY
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MQLNARFYETYYFCNVINNVLNDSFTYAVELNDFYGDGRVFSLIDKFPKQSVFHSFITFV
CCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHCCHHHHHHHHHHHH
VETIYSENSNKIDFDNFDYRSSGLLPIEKAFEYHGIKYQLFKEHLKELCSLKDVFIEDAY
HHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
YDWLLASQYYEDLITQTVEEVFYLLFLNRELLLNFNQIMADSLEMQASDVSVHVHLNDLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHEEECCEEEEEEHHHHH
TTRCKNKRCHIPQWAKRAVYFRDRGRCVLCDKDLSGKLNINNLENYDHMVALANYGFNDV
HHHHCCCCCCCCHHHHHHEEEECCCCEEEECCCCCCCEECCCCCCCHHEEEEECCCCCCH
TNLQLLCKECNQNTKSAGVGSTSNSYQGWY
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA