Click here to switch to the map view.

The map label for this gene is 167625674

Identifier: 167625674

GI number: 167625674

Start: 4579135

End: 4580106

Strand: Reverse

Name: 167625674

Synonym: Shal_3769

Alternate gene names: NA

Gene position: 4580106-4579135 (Counterclockwise)

Preceding gene: 167625680

Following gene: 167625672

Centisome position: 87.63

GC content: 44.44

Gene sequence:

>972_bases
ATGCCCCGCGCAAGAAGTACCTTAATAAGTCTTGAAGATACGCCTTATTATCATTGTTGTAGCCGAGTTGTTCGCCGTGC
CTACCTGTGCGGTGATGATAAATATACAGGCAAGAATTATGACCATCGTCGTGGTTGGGTTGAAGCGCAAATACTCAAGT
TAACAGAGGTGTTTGCGATAGATGTCGCAGCCTATGCCGTGATGAGTAACCATCTGCATGTAGTGCTTTATATTGACCTT
GAAATGGTGAACAGTTGGTCAGATAGGAAAGTCGTTGAGCAGTGGCACAAGCTGTTTAATGGTACTGATTTAACACAGAA
GTTTGCTAAAGGTGATGTGATAGAGGAGTGCATGGTAGCCGCACTAAAACACCTCATCGCGACTTATCGCTCACGTCTGA
GTGATATCAGTTGGTTTATGCGCTGCCTCAACGAACCTATCGCTAGACAAGCCAACTTCGAAGACAATTGCACAGGGCAT
TTCTGGGAAGGACGCTTTAAGAGCCAAGCCTTATTGGATGAGGCAGCTGTGCTAGCTTGTATGGCTTATGTAGAACTCAA
TCCTATTCGGGCCAAGATGGCGAAGACCCCGGAAAAGTCTGATTTCACTAGCTTGCAACTACGAGTGAACGCAGCCTTAA
GGGGTAAACAACCTGCTAAGTTATTGCCGTTTATTGGTAATGAGACAAAGCGCCAACTAAAAGGCATTAATTTCTCGCTG
CAAGATTACTTAATGCTTGTAGATGAGACTGGCCGAATCATTCGTGATGATAAACGAGGCTCTATTTCTCCTAGTGCTGA
AAGGCTATTGAATAGACTTAATATTCCAAGTGAGAATTGGGTCAAGCTTGCTGCTGATTTTGGTAAGTTGTTTCATGGTC
CCGTTGGGTCATTGCAGGAGTTAACCTATTATTGTGAACACCTAGAGAAGCGGCGAAGGCACTTTGCTAACAGTTGTCAG
TATCTTGGATAG

Upstream 100 bases:

>100_bases
TCTTCGTTGACCTTAATAAAACCAATCATAGACACCCAGCCTAATGGCATGTTTTGCAGCCTCTTACTAAGCTATAGGTA
TTGCTTAGTAGGAGGATATT

Downstream 100 bases:

>100_bases
GAAACACGGTTAACGCTCACCAGCGAACATTACTCATAGCCTTATAGTCTATGCCGGCTTCTTTCGTCTAAATCCTATCA
TTTTCTGCTCAAATCATGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 323; Mature: 322

Protein sequence:

>323_residues
MPRARSTLISLEDTPYYHCCSRVVRRAYLCGDDKYTGKNYDHRRGWVEAQILKLTEVFAIDVAAYAVMSNHLHVVLYIDL
EMVNSWSDRKVVEQWHKLFNGTDLTQKFAKGDVIEECMVAALKHLIATYRSRLSDISWFMRCLNEPIARQANFEDNCTGH
FWEGRFKSQALLDEAAVLACMAYVELNPIRAKMAKTPEKSDFTSLQLRVNAALRGKQPAKLLPFIGNETKRQLKGINFSL
QDYLMLVDETGRIIRDDKRGSISPSAERLLNRLNIPSENWVKLAADFGKLFHGPVGSLQELTYYCEHLEKRRRHFANSCQ
YLG

Sequences:

>Translated_323_residues
MPRARSTLISLEDTPYYHCCSRVVRRAYLCGDDKYTGKNYDHRRGWVEAQILKLTEVFAIDVAAYAVMSNHLHVVLYIDL
EMVNSWSDRKVVEQWHKLFNGTDLTQKFAKGDVIEECMVAALKHLIATYRSRLSDISWFMRCLNEPIARQANFEDNCTGH
FWEGRFKSQALLDEAAVLACMAYVELNPIRAKMAKTPEKSDFTSLQLRVNAALRGKQPAKLLPFIGNETKRQLKGINFSL
QDYLMLVDETGRIIRDDKRGSISPSAERLLNRLNIPSENWVKLAADFGKLFHGPVGSLQELTYYCEHLEKRRRHFANSCQ
YLG
>Mature_322_residues
PRARSTLISLEDTPYYHCCSRVVRRAYLCGDDKYTGKNYDHRRGWVEAQILKLTEVFAIDVAAYAVMSNHLHVVLYIDLE
MVNSWSDRKVVEQWHKLFNGTDLTQKFAKGDVIEECMVAALKHLIATYRSRLSDISWFMRCLNEPIARQANFEDNCTGHF
WEGRFKSQALLDEAAVLACMAYVELNPIRAKMAKTPEKSDFTSLQLRVNAALRGKQPAKLLPFIGNETKRQLKGINFSLQ
DYLMLVDETGRIIRDDKRGSISPSAERLLNRLNIPSENWVKLAADFGKLFHGPVGSLQELTYYCEHLEKRRRHFANSCQY
LG

Specific function: Unknown

COG id: COG1943

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37189; Mature: 37058

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRARSTLISLEDTPYYHCCSRVVRRAYLCGDDKYTGKNYDHRRGWVEAQILKLTEVFAI
CCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHH
DVAAYAVMSNHLHVVLYIDLEMVNSWSDRKVVEQWHKLFNGTDLTQKFAKGDVIEECMVA
HHHHHHHHHCCEEEEEEEEHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHH
ALKHLIATYRSRLSDISWFMRCLNEPIARQANFEDNCTGHFWEGRFKSQALLDEAAVLAC
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
MAYVELNPIRAKMAKTPEKSDFTSLQLRVNAALRGKQPAKLLPFIGNETKRQLKGINFSL
HHHHHCCHHHHHHHCCCCCCCCCEEEEEEEHHHCCCCCCHHCCCCCCHHHHHHHCCCCCH
QDYLMLVDETGRIIRDDKRGSISPSAERLLNRLNIPSENWVKLAADFGKLFHGPVGSLQE
HHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHH
LTYYCEHLEKRRRHFANSCQYLG
HHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PRARSTLISLEDTPYYHCCSRVVRRAYLCGDDKYTGKNYDHRRGWVEAQILKLTEVFAI
CCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHH
DVAAYAVMSNHLHVVLYIDLEMVNSWSDRKVVEQWHKLFNGTDLTQKFAKGDVIEECMVA
HHHHHHHHHCCEEEEEEEEHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHH
ALKHLIATYRSRLSDISWFMRCLNEPIARQANFEDNCTGHFWEGRFKSQALLDEAAVLAC
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
MAYVELNPIRAKMAKTPEKSDFTSLQLRVNAALRGKQPAKLLPFIGNETKRQLKGINFSL
HHHHHCCHHHHHHHCCCCCCCCCEEEEEEEHHHCCCCCCHHCCCCCCHHHHHHHCCCCCH
QDYLMLVDETGRIIRDDKRGSISPSAERLLNRLNIPSENWVKLAADFGKLFHGPVGSLQE
HHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHH
LTYYCEHLEKRRRHFANSCQYLG
HHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA