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The map label for this gene is yrbA [H]

Identifier: 167625598

GI number: 167625598

Start: 4495811

End: 4496062

Strand: Reverse

Name: yrbA [H]

Synonym: Shal_3693

Alternate gene names: 167625598

Gene position: 4496062-4495811 (Counterclockwise)

Preceding gene: 167625599

Following gene: 167625597

Centisome position: 86.02

GC content: 42.46

Gene sequence:

>252_bases
ATGGAATGCAAAGAAATTGAAACCATCCTTTTAGACGCGCTTTCTTTAGAGGAAGTTAAAGTGACCCAAGAGGGGACACA
CTACAAGATTGTTGCTGTAGGTGAGTGCTTTGACGGCATGGGACGAGTGAAGCAACAACAGACAATTTACGGCCCATTAA
TGGATCGCATTACTAGCGGTGAGTTACACGCTATTACGATTAACGCATTCACGCCAACACAATGGAAGCGTGAAAAAGTC
TTTAATATGTAA

Upstream 100 bases:

>100_bases
TTGAAGTTAATATCGCCTTCAGAGCAGCTTAAGAAATTTATTATATTATATGATTTAAACGACTTCTTTATTGAAGAAGC
TAAGTAAGGTGAATAGTTCC

Downstream 100 bases:

>100_bases
TCGCGGATTTAGAGAGTTAAAGTGGATAAATTAAAAATTGAAGCAAGTGGTGCACTTGCTGGAAACGTGGTTATCTCTGG
CGCTAAAAATGCTGCCTTGC

Product: BolA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 83; Mature: 83

Protein sequence:

>83_residues
MECKEIETILLDALSLEEVKVTQEGTHYKIVAVGECFDGMGRVKQQQTIYGPLMDRITSGELHAITINAFTPTQWKREKV
FNM

Sequences:

>Translated_83_residues
MECKEIETILLDALSLEEVKVTQEGTHYKIVAVGECFDGMGRVKQQQTIYGPLMDRITSGELHAITINAFTPTQWKREKV
FNM
>Mature_83_residues
MECKEIETILLDALSLEEVKVTQEGTHYKIVAVGECFDGMGRVKQQQTIYGPLMDRITSGELHAITINAFTPTQWKREKV
FNM

Specific function: Unknown

COG id: COG5007

COG function: function code K; Predicted transcriptional regulator, BolA superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bolA/yrbA family [H]

Homologues:

Organism=Escherichia coli, GI87082226, Length=82, Percent_Identity=52.4390243902439, Blast_Score=110, Evalue=1e-26,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002634 [H]

Pfam domain/function: PF01722 BolA [H]

EC number: NA

Molecular weight: Translated: 9461; Mature: 9461

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS00626 RCC1_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MECKEIETILLDALSLEEVKVTQEGTHYKIVAVGECFDGMGRVKQQQTIYGPLMDRITSG
CCHHHHHHHHHHHCCCCEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCC
ELHAITINAFTPTQWKREKVFNM
CEEEEEEECCCCCCCCHHHCCCC
>Mature Secondary Structure
MECKEIETILLDALSLEEVKVTQEGTHYKIVAVGECFDGMGRVKQQQTIYGPLMDRITSG
CCHHHHHHHHHHHCCCCEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCC
ELHAITINAFTPTQWKREKVFNM
CEEEEEEECCCCCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]