Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167625599

Identifier: 167625599

GI number: 167625599

Start: 4496076

End: 4496369

Strand: Reverse

Name: 167625599

Synonym: Shal_3694

Alternate gene names: NA

Gene position: 4496369-4496076 (Counterclockwise)

Preceding gene: 167625600

Following gene: 167625598

Centisome position: 86.02

GC content: 42.18

Gene sequence:

>294_bases
GTGGCCACATTTAAACAGCAAGGGGATAATTGCAGCGTATCGGGTCGTTTAGATCAGGATGCGGTGATCCGGCTGTGGAG
TGGTCGAAGCAATATTTTGGAGCCAGATACCGCATGTTTGCAACTCTCTGGTATTGAATATTGCGACAGTGCTGGTGTGG
CGTTTTTACTGGAGTTAGTCAGTATATTTGCCGCCAAAGGGGCGACTTTGAAGTTAATATCGCCTTCAGAGCAGCTTAAG
AAATTTATTATATTATATGATTTAAACGACTTCTTTATTGAAGAAGCTAAGTAA

Upstream 100 bases:

>100_bases
CCAACCTTGTGCGTCAGCAAGGGATCGAATCAGTGATTAACTTGCTGAAAGAGAAGACAAATCAGCATATTGATTTGGAC
GCTAACGAGAAAAAAAGCTA

Downstream 100 bases:

>100_bases
GGTGAATAGTTCCATGGAATGCAAAGAAATTGAAACCATCCTTTTAGACGCGCTTTCTTTAGAGGAAGTTAAAGTGACCC
AAGAGGGGACACACTACAAG

Product: SpoIIAA family protein

Products: NA

Alternate protein names: Anti-Sigma-Factor Antagonist

Number of amino acids: Translated: 97; Mature: 96

Protein sequence:

>97_residues
MATFKQQGDNCSVSGRLDQDAVIRLWSGRSNILEPDTACLQLSGIEYCDSAGVAFLLELVSIFAAKGATLKLISPSEQLK
KFIILYDLNDFFIEEAK

Sequences:

>Translated_97_residues
MATFKQQGDNCSVSGRLDQDAVIRLWSGRSNILEPDTACLQLSGIEYCDSAGVAFLLELVSIFAAKGATLKLISPSEQLK
KFIILYDLNDFFIEEAK
>Mature_96_residues
ATFKQQGDNCSVSGRLDQDAVIRLWSGRSNILEPDTACLQLSGIEYCDSAGVAFLLELVSIFAAKGATLKLISPSEQLKK
FIILYDLNDFFIEEAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10691; Mature: 10560

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATFKQQGDNCSVSGRLDQDAVIRLWSGRSNILEPDTACLQLSGIEYCDSAGVAFLLELV
CCCCCCCCCCCEECCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHH
SIFAAKGATLKLISPSEQLKKFIILYDLNDFFIEEAK
HHHHCCCCEEEEECCHHHHCEEEEEEECCHHEEECCC
>Mature Secondary Structure 
ATFKQQGDNCSVSGRLDQDAVIRLWSGRSNILEPDTACLQLSGIEYCDSAGVAFLLELV
CCCCCCCCCCEECCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHH
SIFAAKGATLKLISPSEQLKKFIILYDLNDFFIEEAK
HHHHCCCCEEEEECCHHHHCEEEEEEECCHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA