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The map label for this gene is motX [H]

Identifier: 167625585

GI number: 167625585

Start: 4481482

End: 4482105

Strand: Reverse

Name: motX [H]

Synonym: Shal_3679

Alternate gene names: 167625585

Gene position: 4482105-4481482 (Counterclockwise)

Preceding gene: 167625586

Following gene: 167625584

Centisome position: 85.75

GC content: 45.35

Gene sequence:

>624_bases
ATGCTGCGTTATGTATTGATTGTAATTTTGTCGATATTATCTCTACCAAGTTTTGCGACTCCTAAGGCTGTTGATATTTA
TACTCAGGAGCAACTGGTAGATCTGATTCGAACTAAACGCTATTTAACCCAAGTTAAGGGCGATGATTGTCAGATAGTGC
AGGATATTGAAGCAAGGGCTGAGGTACTAAACCAGCCTTTGTATCAGTATCTTTGGGCGGAAATGCTCAACTATGGGATC
TGCGTAAAGGCCAATCCGCCGCGTGGGATCTCTATGTTAAAAACCTCTGCCGAGCAGGGGAGTGCTGAAGCCATGGTTAG
AATGGCTGAGTATTATCACGATGGTAAGTTTGTCATCGAAGATAAACAACGCGCTGTGCAATATACATTGCCAGCTGCCG
CGACGGGCGATTTGCCTGCGCGGATGATGTTGGTTCGGTTATTTGGTGAGGGCTATGGTAGTCCTCGTGATTACGAAGTG
GGCTTTCATTGGTTATACAATGAAGTGTTTAGCGATGAAGCCACACAAGCCGAAGCAATTAATTTGTTAAAGGTGTTAGA
GGCAAAGATGCCGCCCAGCGCAGTCGCTAGGGCAAAGAAAGAGCACCTTAGAACGCAACAATAA

Upstream 100 bases:

>100_bases
ACTGCCGATGACATAAAATAGAGTATATTCAAGTTAGCCTATACTGTCGGTTACTTGATAAAGCGATATTAGACTAACCC
TATTGTCATTGAGAATCCTT

Downstream 100 bases:

>100_bases
GCATGGTCTAGAGATGGCCATGTCACTAATTTGGAAAGTGAATGATACAAGATCCGCATATTAAGCGTGAGCAAGAAAAA
TACGAAAACCCTATTCCAAG

Product: Sel1 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MLRYVLIVILSILSLPSFATPKAVDIYTQEQLVDLIRTKRYLTQVKGDDCQIVQDIEARAEVLNQPLYQYLWAEMLNYGI
CVKANPPRGISMLKTSAEQGSAEAMVRMAEYYHDGKFVIEDKQRAVQYTLPAAATGDLPARMMLVRLFGEGYGSPRDYEV
GFHWLYNEVFSDEATQAEAINLLKVLEAKMPPSAVARAKKEHLRTQQ

Sequences:

>Translated_207_residues
MLRYVLIVILSILSLPSFATPKAVDIYTQEQLVDLIRTKRYLTQVKGDDCQIVQDIEARAEVLNQPLYQYLWAEMLNYGI
CVKANPPRGISMLKTSAEQGSAEAMVRMAEYYHDGKFVIEDKQRAVQYTLPAAATGDLPARMMLVRLFGEGYGSPRDYEV
GFHWLYNEVFSDEATQAEAINLLKVLEAKMPPSAVARAKKEHLRTQQ
>Mature_207_residues
MLRYVLIVILSILSLPSFATPKAVDIYTQEQLVDLIRTKRYLTQVKGDDCQIVQDIEARAEVLNQPLYQYLWAEMLNYGI
CVKANPPRGISMLKTSAEQGSAEAMVRMAEYYHDGKFVIEDKQRAVQYTLPAAATGDLPARMMLVRLFGEGYGSPRDYEV
GFHWLYNEVFSDEATQAEAINLLKVLEAKMPPSAVARAKKEHLRTQQ

Specific function: The power to drive the polar flagellar rotary motor of V.parahaemolyticus is derived from the transmembrane potential of sodium ions. Force is generated by the motor on coupling of the movement of ions across the membrane to rotation of the flagellum. Mot

COG id: COG0790

COG function: function code R; FOG: TPR repeat, SEL1 subfamily

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 Sel1-like repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006597
- InterPro:   IPR011990 [H]

Pfam domain/function: PF08238 Sel1 [H]

EC number: NA

Molecular weight: Translated: 23479; Mature: 23479

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRYVLIVILSILSLPSFATPKAVDIYTQEQLVDLIRTKRYLTQVKGDDCQIVQDIEARA
CHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
EVLNQPLYQYLWAEMLNYGICVKANPPRGISMLKTSAEQGSAEAMVRMAEYYHDGKFVIE
HHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEE
DKQRAVQYTLPAAATGDLPARMMLVRLFGEGYGSPRDYEVGFHWLYNEVFSDEATQAEAI
CCHHHHEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHH
NLLKVLEAKMPPSAVARAKKEHLRTQQ
HHHHHHHHCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLRYVLIVILSILSLPSFATPKAVDIYTQEQLVDLIRTKRYLTQVKGDDCQIVQDIEARA
CHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
EVLNQPLYQYLWAEMLNYGICVKANPPRGISMLKTSAEQGSAEAMVRMAEYYHDGKFVIE
HHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEE
DKQRAVQYTLPAAATGDLPARMMLVRLFGEGYGSPRDYEVGFHWLYNEVFSDEATQAEAI
CCHHHHEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHH
NLLKVLEAKMPPSAVARAKKEHLRTQQ
HHHHHHHHCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7928960; 12620739 [H]