| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is glnE [H]
Identifier: 167625478
GI number: 167625478
Start: 4355935
End: 4358808
Strand: Reverse
Name: glnE [H]
Synonym: Shal_3572
Alternate gene names: 167625478
Gene position: 4358808-4355935 (Counterclockwise)
Preceding gene: 167625487
Following gene: 167625477
Centisome position: 83.39
GC content: 49.72
Gene sequence:
>2874_bases ATGCGCACGGCTACACTGGGTAATAAGCTTGTCAGCACTCAAATGGCTGAGACCGCAGAACGATATTGGCAAAGACTCAC TGATAGCGCCGAGGATATGCTAGTCACTCTGACAGAAGAGCAGCGACATGAATTAAAACAGGTTTTTGCGCTAAGTGATT TTATTGCAACCCAGCTGTGTCGCCACCCCCACTGGATCCCCGCATTATTTAAGCATGCACTGCATAATATTGAGCGCCAA ACATTCGATGGTGAACTGGCTAACTTACTCGAGTCCGCTACCGATGAAGAGCAAGCCAAACGTATTTTGCGTCAATACCG TAATCGGCAGATGGTGTGTATCGCTTGGCGTGACTTTCTTGGTTACAGCGAATTAGCAGAATCATTATTAGATCTATCCG CCTTGGCCGAGGCACTCATTATAGCGGGTCGAGATTGGTTATATCGCGAGATGTGCGCCACGCTCGGTACTCCAAGCGAT AGCCAAGGCAAACCACAGAAGTTACTCATCTTAGGGATGGGCAAGCTCGGTGGTCGTGAGCTTAACTTCTCGTCAGACAT TGACCTTATCTTTACCTTTGCTGAACACGGTGAAACGGTTGGGGGAAGGCGTGCATTAGAAAACCAGCAGTTCTTTATTC GCATGGGCCAGCGCTTGGTTAACTTGCTCCACCAAGTCACGGTTGACGGATTTGTATATCGCGTCGATATGCGCCTGCGC CCCTATGGTGAAAGTGGTCCATTAGTGGTTAGCTTTAGCGGGCTGGAAGATTACTATCAAGAGCAGGGCCGTGATTGGGA ACGCTATGCCATGATAAAGGCGCGAGCACTAGGGCCTTGGACTGCCGACTCTGACGAGCTGCATGATCTGCTCAGACCGT TTGTGTATCGCCGTTATTTAGATTTTTCGGCGATAGAATCACTGCGCAAGATGAAGGGCTTGATCACCCAAGAGGTTCGC CGCCGTAAGTTGACTGACAATATTAAACTCGGCGCCGGTGGTATTCGAGAGGTCGAATTCGTGGTGCAGAGTTTTCAGCT TATTCGTGGTGGCCGCGAGCCCACATTAAGGCAGCAGAGCCTGTTTGCAGCCATTGATACTCTGTACCAGCTAGGACAGC TGGAGTACTTGGCCGTCGATGAGCTAAAAAATAGCTATGTGTTACTGCGCCGGGTTGAAAACTTATTGCAAGCGATAAAC GATGAGCAAACCCAGACATTACCTAGTGAAGCGCTTGATTGGCAGCGTTTATGCTATGCCCTCAACGCCGATACCGAAAT GGATCTGCGGGAGCAGATTGAAATGGCCATGAGACAGATCCACAGCCATTTCCTGGAAACTGTTGGGGGTAATATTCATG AGGATCAAAGCGAGACGTGGACTCAGCAGTTATGGAGCGCCTATGAAGATGAGCATGCGCTCTCAATTTTAGAAGAGCAG GGGATCGATGATGAAAAGCTTTGGCCGCTGCTTAACGGCTGGCACGAGACTGTGGCGCGCCGCACTATTGGTCCAAGGGG GCGCGAAACCTTAGACAAGTTGATGCCTAAGCTATTGTCAGAGTTTACCTCGGTGGCAACTCCTTCGAAGGCATTTGAGC CGGTGTCAAAGGTGCTGGATCAGATCTTAACGCGTACCACCTATCTTGAGCTCTTGTGTGAAAACCCAGGGGCAAGGCAG CAGCTCGTTAGTCTTTGTCTCGCCAGTCCATGGATTGCTCAGCAGCTGGCGAAGTTTCCCATGCTGCTCGATGAGTTGAT CGATCCTGCCCAGCTGTATGACACCACGCCGTTAGACGATTACGGCAGTGAATTGCGTCAATATCTGCTGCGTGTGCCGG AAGATGATTTAGAGCAACAGATGGAAGCGCTACGTCAGTTTAAGTTATCACAGCAGTTAAAGATTGCCGCAGCAGACGTG ACAGGGGTGTTGCCAGTGATGGAAGTGAGCGATCACTTAACCTTCTTGGCCGAAGCGATTATCGAGCAGGTGGTGCATCA GGCGTGGGCACAGGTCAGTGCTCGTCATGGTGTACCAGAAAACCTTAAAGATAATGAGATGGGCTTTGCGGTTGTAGGTT ACGGAAAAGCGGGTGGCATTGAGCTCGGTTACGGCTCAGATCTTGACTTAGTCTTTTTGCATAACGGCAGTCAAGTCGGG CTGACCAATGGTGATAGAGCCATCGATATCGGCCACTTTTACCTAAAGCTGGCCCAGCGAGTGCTGCACTTTTTCTCGAC CCGTACTAACTCTGGCGAGTTGTATGAAGTCGATATGCGCCTGCGACCCTCTGGCGCGTCGGGGTTATTGGTGAGCGAGA TAGAACACTTTGGTGATTACCAGCGCAGCGATGCCTGGACATGGGAGCATCAAGCCTTAGTCAGAGCACGTTTCATGTTT GGTGATACTGCACTGTCTATGCGCTTTAATGAACTCAGGGCTGAGGTGTTAGAAAATGAGCGTGATATGGCCATCTTGGC AAAAGATGTGAGAGATATGCGGGTTAAGATGCGCGATCATCTTTTAAAAGTCGAAGCGGGCATGTTTGACCTTAAGCAAA GCAGTGGCGGTATTGCCGATATTGAGTTTATTGCTCAATACTTAGTGCTGGCACATAGCAATCAACATAAAGCATTGTCG TTTTGGTCTGATAACGTGCGTATATTTGCCGAGCTTGCTGAACTTGAGCTGTTGCCCTTAGATAGTGCGCAGGCGTTAAC TCAAGCCTACTGCCATCTGCGTGATGAGTGCCATAGGTTGACGCTGCAGCAGAAGAAAAGCGTGTTACCCATTGATGCCG TCAAGTCCCATAGTGAGCGGGTTGAAGCTATCTACCACCAGATCTTAGGCGAACAACTTAAGCGAATAACTTAA
Upstream 100 bases:
>100_bases CAGGCCAACATAAACGCCAAAGATTGCTCACATTTATTTACGCTCTATCTATATCATTAACGACATAATATGTCGACATA CAAAATTGTTAGGGATTATT
Downstream 100 bases:
>100_bases GCGAATAACTAGGCTAAGCATTAGCCCAATAGTTAGCGCTAGAGTGAAATCTCATCCCCCGCAGCGACCCTGTGGGGGAT TTTTTATGCTCGTGAAAACA
Product: bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase
Products: NA
Alternate protein names: Glutamine-synthetase adenylyltransferase; ATase; [Glutamate--ammonia-ligase] adenylyltransferase [H]
Number of amino acids: Translated: 957; Mature: 957
Protein sequence:
>957_residues MRTATLGNKLVSTQMAETAERYWQRLTDSAEDMLVTLTEEQRHELKQVFALSDFIATQLCRHPHWIPALFKHALHNIERQ TFDGELANLLESATDEEQAKRILRQYRNRQMVCIAWRDFLGYSELAESLLDLSALAEALIIAGRDWLYREMCATLGTPSD SQGKPQKLLILGMGKLGGRELNFSSDIDLIFTFAEHGETVGGRRALENQQFFIRMGQRLVNLLHQVTVDGFVYRVDMRLR PYGESGPLVVSFSGLEDYYQEQGRDWERYAMIKARALGPWTADSDELHDLLRPFVYRRYLDFSAIESLRKMKGLITQEVR RRKLTDNIKLGAGGIREVEFVVQSFQLIRGGREPTLRQQSLFAAIDTLYQLGQLEYLAVDELKNSYVLLRRVENLLQAIN DEQTQTLPSEALDWQRLCYALNADTEMDLREQIEMAMRQIHSHFLETVGGNIHEDQSETWTQQLWSAYEDEHALSILEEQ GIDDEKLWPLLNGWHETVARRTIGPRGRETLDKLMPKLLSEFTSVATPSKAFEPVSKVLDQILTRTTYLELLCENPGARQ QLVSLCLASPWIAQQLAKFPMLLDELIDPAQLYDTTPLDDYGSELRQYLLRVPEDDLEQQMEALRQFKLSQQLKIAAADV TGVLPVMEVSDHLTFLAEAIIEQVVHQAWAQVSARHGVPENLKDNEMGFAVVGYGKAGGIELGYGSDLDLVFLHNGSQVG LTNGDRAIDIGHFYLKLAQRVLHFFSTRTNSGELYEVDMRLRPSGASGLLVSEIEHFGDYQRSDAWTWEHQALVRARFMF GDTALSMRFNELRAEVLENERDMAILAKDVRDMRVKMRDHLLKVEAGMFDLKQSSGGIADIEFIAQYLVLAHSNQHKALS FWSDNVRIFAELAELELLPLDSAQALTQAYCHLRDECHRLTLQQKKSVLPIDAVKSHSERVEAIYHQILGEQLKRIT
Sequences:
>Translated_957_residues MRTATLGNKLVSTQMAETAERYWQRLTDSAEDMLVTLTEEQRHELKQVFALSDFIATQLCRHPHWIPALFKHALHNIERQ TFDGELANLLESATDEEQAKRILRQYRNRQMVCIAWRDFLGYSELAESLLDLSALAEALIIAGRDWLYREMCATLGTPSD SQGKPQKLLILGMGKLGGRELNFSSDIDLIFTFAEHGETVGGRRALENQQFFIRMGQRLVNLLHQVTVDGFVYRVDMRLR PYGESGPLVVSFSGLEDYYQEQGRDWERYAMIKARALGPWTADSDELHDLLRPFVYRRYLDFSAIESLRKMKGLITQEVR RRKLTDNIKLGAGGIREVEFVVQSFQLIRGGREPTLRQQSLFAAIDTLYQLGQLEYLAVDELKNSYVLLRRVENLLQAIN DEQTQTLPSEALDWQRLCYALNADTEMDLREQIEMAMRQIHSHFLETVGGNIHEDQSETWTQQLWSAYEDEHALSILEEQ GIDDEKLWPLLNGWHETVARRTIGPRGRETLDKLMPKLLSEFTSVATPSKAFEPVSKVLDQILTRTTYLELLCENPGARQ QLVSLCLASPWIAQQLAKFPMLLDELIDPAQLYDTTPLDDYGSELRQYLLRVPEDDLEQQMEALRQFKLSQQLKIAAADV TGVLPVMEVSDHLTFLAEAIIEQVVHQAWAQVSARHGVPENLKDNEMGFAVVGYGKAGGIELGYGSDLDLVFLHNGSQVG LTNGDRAIDIGHFYLKLAQRVLHFFSTRTNSGELYEVDMRLRPSGASGLLVSEIEHFGDYQRSDAWTWEHQALVRARFMF GDTALSMRFNELRAEVLENERDMAILAKDVRDMRVKMRDHLLKVEAGMFDLKQSSGGIADIEFIAQYLVLAHSNQHKALS FWSDNVRIFAELAELELLPLDSAQALTQAYCHLRDECHRLTLQQKKSVLPIDAVKSHSERVEAIYHQILGEQLKRIT >Mature_957_residues MRTATLGNKLVSTQMAETAERYWQRLTDSAEDMLVTLTEEQRHELKQVFALSDFIATQLCRHPHWIPALFKHALHNIERQ TFDGELANLLESATDEEQAKRILRQYRNRQMVCIAWRDFLGYSELAESLLDLSALAEALIIAGRDWLYREMCATLGTPSD SQGKPQKLLILGMGKLGGRELNFSSDIDLIFTFAEHGETVGGRRALENQQFFIRMGQRLVNLLHQVTVDGFVYRVDMRLR PYGESGPLVVSFSGLEDYYQEQGRDWERYAMIKARALGPWTADSDELHDLLRPFVYRRYLDFSAIESLRKMKGLITQEVR RRKLTDNIKLGAGGIREVEFVVQSFQLIRGGREPTLRQQSLFAAIDTLYQLGQLEYLAVDELKNSYVLLRRVENLLQAIN DEQTQTLPSEALDWQRLCYALNADTEMDLREQIEMAMRQIHSHFLETVGGNIHEDQSETWTQQLWSAYEDEHALSILEEQ GIDDEKLWPLLNGWHETVARRTIGPRGRETLDKLMPKLLSEFTSVATPSKAFEPVSKVLDQILTRTTYLELLCENPGARQ QLVSLCLASPWIAQQLAKFPMLLDELIDPAQLYDTTPLDDYGSELRQYLLRVPEDDLEQQMEALRQFKLSQQLKIAAADV TGVLPVMEVSDHLTFLAEAIIEQVVHQAWAQVSARHGVPENLKDNEMGFAVVGYGKAGGIELGYGSDLDLVFLHNGSQVG LTNGDRAIDIGHFYLKLAQRVLHFFSTRTNSGELYEVDMRLRPSGASGLLVSEIEHFGDYQRSDAWTWEHQALVRARFMF GDTALSMRFNELRAEVLENERDMAILAKDVRDMRVKMRDHLLKVEAGMFDLKQSSGGIADIEFIAQYLVLAHSNQHKALS FWSDNVRIFAELAELELLPLDSAQALTQAYCHLRDECHRLTLQQKKSVLPIDAVKSHSERVEAIYHQILGEQLKRIT
Specific function: Adenylation and deadenylation of glutamate--ammonia ligase [H]
COG id: COG1391
COG function: function code OT; Glutamine synthetase adenylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glnE family [H]
Homologues:
Organism=Escherichia coli, GI1789433, Length=945, Percent_Identity=52.1693121693122, Blast_Score=907, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023057 - InterPro: IPR005190 - InterPro: IPR013546 [H]
Pfam domain/function: PF08335 GlnD_UR_UTase; PF03710 GlnE [H]
EC number: =2.7.7.42 [H]
Molecular weight: Translated: 109435; Mature: 109435
Theoretical pI: Translated: 5.09; Mature: 5.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTATLGNKLVSTQMAETAERYWQRLTDSAEDMLVTLTEEQRHELKQVFALSDFIATQLC CCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEECHHHHHHHHHHHHHHHHHHHHHH RHPHWIPALFKHALHNIERQTFDGELANLLESATDEEQAKRILRQYRNRQMVCIAWRDFL CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEHHHHHC GYSELAESLLDLSALAEALIIAGRDWLYREMCATLGTPSDSQGKPQKLLILGMGKLGGRE CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCC LNFSSDIDLIFTFAEHGETVGGRRALENQQFFIRMGQRLVNLLHQVTVDGFVYRVDMRLR CCCCCCCHHEEEEHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEE PYGESGPLVVSFSGLEDYYQEQGRDWERYAMIKARALGPWTADSDELHDLLRPFVYRRYL CCCCCCCEEEEECCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH DFSAIESLRKMKGLITQEVRRRKLTDNIKLGAGGIREVEFVVQSFQLIRGGREPTLRQQS CHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHH LFAAIDTLYQLGQLEYLAVDELKNSYVLLRRVENLLQAINDEQTQTLPSEALDWQRLCYA HHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHH LNADTEMDLREQIEMAMRQIHSHFLETVGGNIHEDQSETWTQQLWSAYEDEHALSILEEQ HCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHC GIDDEKLWPLLNGWHETVARRTIGPRGRETLDKLMPKLLSEFTSVATPSKAFEPVSKVLD CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH QILTRTTYLELLCENPGARQQLVSLCLASPWIAQQLAKFPMLLDELIDPAQLYDTTPLDD HHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHH YGSELRQYLLRVPEDDLEQQMEALRQFKLSQQLKIAAADVTGVLPVMEVSDHLTFLAEAI HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IEQVVHQAWAQVSARHGVPENLKDNEMGFAVVGYGKAGGIELGYGSDLDLVFLHNGSQVG HHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCEEECCCCCCEEEEEECCCEEC LTNGDRAIDIGHFYLKLAQRVLHFFSTRTNSGELYEVDMRLRPSGASGLLVSEIEHFGDY CCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHCCC QRSDAWTWEHQALVRARFMFGDTALSMRFNELRAEVLENERDMAILAKDVRDMRVKMRDH CCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH LLKVEAGMFDLKQSSGGIADIEFIAQYLVLAHSNQHKALSFWSDNVRIFAELAELELLPL HHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHCCCC DSAQALTQAYCHLRDECHRLTLQQKKSVLPIDAVKSHSERVEAIYHQILGEQLKRIT CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRTATLGNKLVSTQMAETAERYWQRLTDSAEDMLVTLTEEQRHELKQVFALSDFIATQLC CCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHEEEECHHHHHHHHHHHHHHHHHHHHHH RHPHWIPALFKHALHNIERQTFDGELANLLESATDEEQAKRILRQYRNRQMVCIAWRDFL CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEHHHHHC GYSELAESLLDLSALAEALIIAGRDWLYREMCATLGTPSDSQGKPQKLLILGMGKLGGRE CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCC LNFSSDIDLIFTFAEHGETVGGRRALENQQFFIRMGQRLVNLLHQVTVDGFVYRVDMRLR CCCCCCCHHEEEEHHCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEE PYGESGPLVVSFSGLEDYYQEQGRDWERYAMIKARALGPWTADSDELHDLLRPFVYRRYL CCCCCCCEEEEECCHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH DFSAIESLRKMKGLITQEVRRRKLTDNIKLGAGGIREVEFVVQSFQLIRGGREPTLRQQS CHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHCCCCCCHHHHH LFAAIDTLYQLGQLEYLAVDELKNSYVLLRRVENLLQAINDEQTQTLPSEALDWQRLCYA HHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHH LNADTEMDLREQIEMAMRQIHSHFLETVGGNIHEDQSETWTQQLWSAYEDEHALSILEEQ HCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHC GIDDEKLWPLLNGWHETVARRTIGPRGRETLDKLMPKLLSEFTSVATPSKAFEPVSKVLD CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH QILTRTTYLELLCENPGARQQLVSLCLASPWIAQQLAKFPMLLDELIDPAQLYDTTPLDD HHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHH YGSELRQYLLRVPEDDLEQQMEALRQFKLSQQLKIAAADVTGVLPVMEVSDHLTFLAEAI HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IEQVVHQAWAQVSARHGVPENLKDNEMGFAVVGYGKAGGIELGYGSDLDLVFLHNGSQVG HHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCEEECCCCCCEEEEEECCCEEC LTNGDRAIDIGHFYLKLAQRVLHFFSTRTNSGELYEVDMRLRPSGASGLLVSEIEHFGDY CCCCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHCCC QRSDAWTWEHQALVRARFMFGDTALSMRFNELRAEVLENERDMAILAKDVRDMRVKMRDH CCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH LLKVEAGMFDLKQSSGGIADIEFIAQYLVLAHSNQHKALSFWSDNVRIFAELAELELLPL HHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHCCCC DSAQALTQAYCHLRDECHRLTLQQKKSVLPIDAVKSHSERVEAIYHQILGEQLKRIT CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA