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The map label for this gene is ygiF [H]

Identifier: 167625487

GI number: 167625487

Start: 4366188

End: 4367675

Strand: Reverse

Name: ygiF [H]

Synonym: Shal_3581

Alternate gene names: 167625487

Gene position: 4367675-4366188 (Counterclockwise)

Preceding gene: 167625494

Following gene: 167625478

Centisome position: 83.56

GC content: 43.48

Gene sequence:

>1488_bases
ATGGAAGCCGAGATTGAACTCAAACTTTTCTTTAATGAAAATAATAAGAAAAGCCTTATAAACCTGCTAGATAGCTTACC
TAATTGCGATGCTAAAGGTATAGAAAAACTGACAAACAGTTACTTTGACACCCCTGACCTGACCTTAAGAAAGTGGGACA
TGGGACTGCGAGTTAGGGGCGTTAATCAACATTTAGAGCAAACAATTAAAACAAAAGGTCAGGTTGTTGGCGGGATCCAC
TCTCGACCTGAGTATAATGTTGATATAGATCAAAAATTTCCCCAATTAAATTTATTCCCAACTGAAATTTGGCCTGAACA
GGAAAATATTGAGCAAACACAGTCGGCACTTTACTGTTTGTTTCATACTGATTTCGAGCGTCAGCGTTGGCATATTTTTG
TCGATGACAGCTTGGTCGAGGTCGCCTTAGATATCGGTGAGATCCGTGTTAATGAAGCCGTAGATCCTATTTGTGAATTA
GAATTTGAGCTATTAGCGGGTGATACCAGCGCGTTATTAACGTTAGCTGGTATCGTGAGCAGAGCAGTACCTGTACGTTT
GGGCAAGGCCAGTAAAGCGCAGCGAGGTTACCGTTTAGCGGGCCAATCTAGCGCAGAAACTATTGATGCACTTAAGTTTA
TCGAGATTGAACCCCACCAGAGCCTAAAGCAAGTGGCCATTAACCTATTAACTCTGGGATTAGATCGTTGGCAAACCATA
GAATCTATGCTGCTCGATCCTGAGCAAAATCTATTAGCATTGCCCATATTGAGTTATCGATTGCGGGCGTGTATCCGTTT
GCTGAAAAGCACGCTAAAACAGTTCGAACTGCTTGAAGACTCTTTTCAAGCGGATTTTGATTGTATTGAGCAGCGACTCA
ATTTTATTGAAGAGGCGTTGAGTTTATACAGCATCATTGATGATGACGCGGCACTGATTGCTAAGTTACCTCAACAGCAA
GCCTTGGTCGATGTCGCCTTGGTTAGCTTGCAGCAGTTAGATATCATCGGACATCTGGAGCAATTGCTGGCTGATATTTG
CTACGGTAGGTTGCAAGTTCATTTGGTCGATCTATTGACCCAGATCGGCGATGGCCAAGTGAGCATTAATCGACAATTAG
CACTCAGACACTTTGCTAACCAGATGCAGGAGAACTCCTGGCAACGGATCTTAGATGTGATGCCACTGGATAATGACTTA
AGTAGCGCCGATTATCTCTCAGTTGCTAAGGCGCTAGATGACAGTATTTTTGTTGGTGTGGCCTATGGCGAGCTTTACTC
AGAGAAGTCTCGTGATCAATTTAGAGCACCTTGGCAAGATTTAGCGTTAGGGATCCGAACCTTAGCCGCTTATCGTCAAC
TAAAGCTGATTAGTGAGATTGCATACTTAGATATTACAGACTGGCTCGAGAACAAAGAGCAGAGTTTAGTGCAAGCGATG
GAATTTTCGCGCCGCAGCGCGATGAAAAATGAGCCCTATTGGCGCTAA

Upstream 100 bases:

>100_bases
GCAAAGCGGATCCTACGGTTGTATTATTGCAGAAATATTACAGTGTGTAACTTTAGTGACAGTTTGATTAATTTTTGATG
ACAAGGTGAATAATACATCG

Downstream 100 bases:

>100_bases
TCGCAATTAGTTTAACGATGTCATTCAGTTGAAAGAAGTGATACTCAACAACAAGCCCACGTGATGTGGGCTTTTTGTTT
TTACGTTATTTTAGCTTTAT

Product: adenylate cyclase

Products: NA

Alternate protein names: ORFXE [H]

Number of amino acids: Translated: 495; Mature: 495

Protein sequence:

>495_residues
MEAEIELKLFFNENNKKSLINLLDSLPNCDAKGIEKLTNSYFDTPDLTLRKWDMGLRVRGVNQHLEQTIKTKGQVVGGIH
SRPEYNVDIDQKFPQLNLFPTEIWPEQENIEQTQSALYCLFHTDFERQRWHIFVDDSLVEVALDIGEIRVNEAVDPICEL
EFELLAGDTSALLTLAGIVSRAVPVRLGKASKAQRGYRLAGQSSAETIDALKFIEIEPHQSLKQVAINLLTLGLDRWQTI
ESMLLDPEQNLLALPILSYRLRACIRLLKSTLKQFELLEDSFQADFDCIEQRLNFIEEALSLYSIIDDDAALIAKLPQQQ
ALVDVALVSLQQLDIIGHLEQLLADICYGRLQVHLVDLLTQIGDGQVSINRQLALRHFANQMQENSWQRILDVMPLDNDL
SSADYLSVAKALDDSIFVGVAYGELYSEKSRDQFRAPWQDLALGIRTLAAYRQLKLISEIAYLDITDWLENKEQSLVQAM
EFSRRSAMKNEPYWR

Sequences:

>Translated_495_residues
MEAEIELKLFFNENNKKSLINLLDSLPNCDAKGIEKLTNSYFDTPDLTLRKWDMGLRVRGVNQHLEQTIKTKGQVVGGIH
SRPEYNVDIDQKFPQLNLFPTEIWPEQENIEQTQSALYCLFHTDFERQRWHIFVDDSLVEVALDIGEIRVNEAVDPICEL
EFELLAGDTSALLTLAGIVSRAVPVRLGKASKAQRGYRLAGQSSAETIDALKFIEIEPHQSLKQVAINLLTLGLDRWQTI
ESMLLDPEQNLLALPILSYRLRACIRLLKSTLKQFELLEDSFQADFDCIEQRLNFIEEALSLYSIIDDDAALIAKLPQQQ
ALVDVALVSLQQLDIIGHLEQLLADICYGRLQVHLVDLLTQIGDGQVSINRQLALRHFANQMQENSWQRILDVMPLDNDL
SSADYLSVAKALDDSIFVGVAYGELYSEKSRDQFRAPWQDLALGIRTLAAYRQLKLISEIAYLDITDWLENKEQSLVQAM
EFSRRSAMKNEPYWR
>Mature_495_residues
MEAEIELKLFFNENNKKSLINLLDSLPNCDAKGIEKLTNSYFDTPDLTLRKWDMGLRVRGVNQHLEQTIKTKGQVVGGIH
SRPEYNVDIDQKFPQLNLFPTEIWPEQENIEQTQSALYCLFHTDFERQRWHIFVDDSLVEVALDIGEIRVNEAVDPICEL
EFELLAGDTSALLTLAGIVSRAVPVRLGKASKAQRGYRLAGQSSAETIDALKFIEIEPHQSLKQVAINLLTLGLDRWQTI
ESMLLDPEQNLLALPILSYRLRACIRLLKSTLKQFELLEDSFQADFDCIEQRLNFIEEALSLYSIIDDDAALIAKLPQQQ
ALVDVALVSLQQLDIIGHLEQLLADICYGRLQVHLVDLLTQIGDGQVSINRQLALRHFANQMQENSWQRILDVMPLDNDL
SSADYLSVAKALDDSIFVGVAYGELYSEKSRDQFRAPWQDLALGIRTLAAYRQLKLISEIAYLDITDWLENKEQSLVQAM
EFSRRSAMKNEPYWR

Specific function: Unknown

COG id: COG3025

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1598 [H]

Homologues:

Organism=Escherichia coli, GI1789434, Length=266, Percent_Identity=39.4736842105263, Blast_Score=177, Evalue=2e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008172
- InterPro:   IPR004206 [H]

Pfam domain/function: PF01928 CYTH [H]

EC number: NA

Molecular weight: Translated: 56508; Mature: 56508

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAEIELKLFFNENNKKSLINLLDSLPNCDAKGIEKLTNSYFDTPDLTLRKWDMGLRVRG
CCCEEEEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCEEEC
VNQHLEQTIKTKGQVVGGIHSRPEYNVDIDQKFPQLNLFPTEIWPEQENIEQTQSALYCL
HHHHHHHHHHHCCCEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHEEEE
FHTDFERQRWHIFVDDSLVEVALDIGEIRVNEAVDPICELEFELLAGDTSALLTLAGIVS
EECCCCCCEEEEEECCHHHHHHHHHHHEEEHHHHCHHHHHHHHHHCCCHHHHHHHHHHHH
RAVPVRLGKASKAQRGYRLAGQSSAETIDALKFIEIEPHQSLKQVAINLLTLGLDRWQTI
HHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHEEEECCHHHHHHHHHHHHHHCCHHHHHH
ESMLLDPEQNLLALPILSYRLRACIRLLKSTLKQFELLEDSFQADFDCIEQRLNFIEEAL
HHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
SLYSIIDDDAALIAKLPQQQALVDVALVSLQQLDIIGHLEQLLADICYGRLQVHLVDLLT
HHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QIGDGQVSINRQLALRHFANQMQENSWQRILDVMPLDNDLSSADYLSVAKALDDSIFVGV
HCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEE
AYGELYSEKSRDQFRAPWQDLALGIRTLAAYRQLKLISEIAYLDITDWLENKEQSLVQAM
HHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
EFSRRSAMKNEPYWR
HHHHHHHCCCCCCCC
>Mature Secondary Structure
MEAEIELKLFFNENNKKSLINLLDSLPNCDAKGIEKLTNSYFDTPDLTLRKWDMGLRVRG
CCCEEEEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCEEEC
VNQHLEQTIKTKGQVVGGIHSRPEYNVDIDQKFPQLNLFPTEIWPEQENIEQTQSALYCL
HHHHHHHHHHHCCCEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHHEEEE
FHTDFERQRWHIFVDDSLVEVALDIGEIRVNEAVDPICELEFELLAGDTSALLTLAGIVS
EECCCCCCEEEEEECCHHHHHHHHHHHEEEHHHHCHHHHHHHHHHCCCHHHHHHHHHHHH
RAVPVRLGKASKAQRGYRLAGQSSAETIDALKFIEIEPHQSLKQVAINLLTLGLDRWQTI
HHHHHHCCCCHHHHCCCCCCCCCCHHHHHHHHEEEECCHHHHHHHHHHHHHHCCHHHHHH
ESMLLDPEQNLLALPILSYRLRACIRLLKSTLKQFELLEDSFQADFDCIEQRLNFIEEAL
HHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
SLYSIIDDDAALIAKLPQQQALVDVALVSLQQLDIIGHLEQLLADICYGRLQVHLVDLLT
HHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QIGDGQVSINRQLALRHFANQMQENSWQRILDVMPLDNDLSSADYLSVAKALDDSIFVGV
HCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEE
AYGELYSEKSRDQFRAPWQDLALGIRTLAAYRQLKLISEIAYLDITDWLENKEQSLVQAM
HHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
EFSRRSAMKNEPYWR
HHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8412694; 9278503 [H]