The gene/protein map for NC_010334 is currently unavailable.
Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167625405

Identifier: 167625405

GI number: 167625405

Start: 4261792

End: 4263627

Strand: Reverse

Name: 167625405

Synonym: Shal_3495

Alternate gene names: NA

Gene position: 4263627-4261792 (Counterclockwise)

Preceding gene: 167625408

Following gene: 167625404

Centisome position: 81.57

GC content: 42.81

Gene sequence:

>1836_bases
ATGATGAAAAAAGCAATATTATTTCCTTTAGTTGTTAGTGTGGTTGCAGCCTGTGGTGGCGGTAGTGAAGGCGATAGCCA
AGCCTCCGGCGTTCAAGTGTTAGGGACTGTGGTAGCCGACGCCTACTTATTTGATGACGATGCCATCAAGCGCGTTAACT
CTCGTCGTGGCACAAATTACAGTGCAGAAAATGGTGAGCAAGGAAAGTCAGATTTAGATACATGGCATGTGTGTGGCGCG
GCTTATAACAGCTTGGTTAATCCAAGCTTATATAACCAAGATCTCGATAAAGATGGCGTAGCAGATACCAACCTAACTGA
CGATGAAGGTAACCTTTATTACAATATCGATCTTGATGGCGATAAGGTTGCTGAGCTTAATCTCTTGACTGATAGAGAGG
GCATTTACCTTAACGTCGACATGAATTGTGATGCCAAAGCCGATACCAATCTCGATAATAATCTAGATGGTATTAGCGAT
CTTAATATCGACGTCGATGGCGATATGCAGGCCGACCGATTAATCGATATCGATGGTGACGGTAAACCTGACTTCTCTTA
TACCGACAGTGATGGTGTATCACTTGCTGGTGTAAAGGTACAACTACAAGGCAAATATGGTGAGTTTGAAACCATAACAG
ATGATAACGGACAGTTTTCTTTTGAGCGCATCCCTACAGGCTCTTACACCTTAAAAGCGGATGATGTTGCTCTTGATGGT
TCAAATATTTGGACGCGTACTCTAGTTGAAATTGAAGAGTTTGATGACTCTATTGGCGCGTTCAGAATGCACCAAGATCC
GATTATCACTCTGGTTAATGTCAATAATGAATCTCATAAAAAAGGTTTCTGGCAGGACTTCTCTTGGTATTCAAGTGATA
TTGAAACTGAATACGCGATTGGCGATACAGTTTGGGTTGAGGTGACGGTTGAAGATCCTAATCAGCGTCCAGTAACAGCA
AAATTTAGCGCTGATCTAGAGACTGGTACTGAAGAAGTCGTTGCTGGCGACGGCGTGTTTAAGTACCAACACCAAATCAG
CGAAAAGGATGCTGAGGAGTATATGGTGTCTATTATGGCTGAACTGAGTAACGATGACGGCTTTTTCGGCCTAAATGGCA
TGACTGATGTTATGTTTGGCGCTCAGTTTATGATGGCGGATTATATTGAAAGCGAAGAGCTAGAAGTCGAAACCGTCACC
GTGGGGGATGAAGTTTTTGATAACCCACCAGACTCAACTTATATGCTAGTTGAAGTACAACAGCCAATTGCCATCGATGG
CAGCGTACAGATAGATGTAGAGGTGACAGGCCCTGATGAACGTATCGCAGAGTTTTATGTGGTAGGAATTAAGGATGGTT
TTGCTAAAGTACCGAAAGGTGACAGTTTCCTGTTTGAAGCTGATACGGCTTATCCGCAATATATATATGAGATCCAATAT
AAAACTTATAGTGAAGCCCCTTTTGAACACGAAGAGGTGGTTATTAAGATCCCACTAGACACAGACCGTAAGCCTGCGAA
GGTTGATGGTTTGATGATTGATGGCATCGTGGCAACGGATGTTATGGCTAGGGTTGGTGAAACTTATCAACTAAAGGCGC
TTTATACCGATCCTCAAGATGATGTAGTGCAGTGCCGTTTTGAAAAGGCGGGTAATCATAGCGCGTTAGATAGCGTGATT
AGTGATTGGGGCGTCTGTGAGGTTGACTATACCTTTAAAGCAGAAGATGCCGTTGACCAATTTAATATCCGTGTGTTAGT
GCGTAATAGTGACGGTATTATTACTTGGGATAATTATGACGATCTTAAGTGGTATGAAGTTAGCGTGACTAAATAA

Upstream 100 bases:

>100_bases
ACATAAAAATCTTATTTATTTAAACCTTACATCAAGCTTGCCAGTTGCGGAGTTTCCTCTGTCATTACGGGCAGTCTATG
TTGTTCTGTGAATATGAGTC

Downstream 100 bases:

>100_bases
TCGTCCATTATCCAGTCCCTAAATAAAAGAAGCTGCCATATTTGGCAGCTTCTTTTATTTAGCTCAAGCCACCGAGTTAA
GAGGGGGGATTTATACCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 611; Mature: 611

Protein sequence:

>611_residues
MMKKAILFPLVVSVVAACGGGSEGDSQASGVQVLGTVVADAYLFDDDAIKRVNSRRGTNYSAENGEQGKSDLDTWHVCGA
AYNSLVNPSLYNQDLDKDGVADTNLTDDEGNLYYNIDLDGDKVAELNLLTDREGIYLNVDMNCDAKADTNLDNNLDGISD
LNIDVDGDMQADRLIDIDGDGKPDFSYTDSDGVSLAGVKVQLQGKYGEFETITDDNGQFSFERIPTGSYTLKADDVALDG
SNIWTRTLVEIEEFDDSIGAFRMHQDPIITLVNVNNESHKKGFWQDFSWYSSDIETEYAIGDTVWVEVTVEDPNQRPVTA
KFSADLETGTEEVVAGDGVFKYQHQISEKDAEEYMVSIMAELSNDDGFFGLNGMTDVMFGAQFMMADYIESEELEVETVT
VGDEVFDNPPDSTYMLVEVQQPIAIDGSVQIDVEVTGPDERIAEFYVVGIKDGFAKVPKGDSFLFEADTAYPQYIYEIQY
KTYSEAPFEHEEVVIKIPLDTDRKPAKVDGLMIDGIVATDVMARVGETYQLKALYTDPQDDVVQCRFEKAGNHSALDSVI
SDWGVCEVDYTFKAEDAVDQFNIRVLVRNSDGIITWDNYDDLKWYEVSVTK

Sequences:

>Translated_611_residues
MMKKAILFPLVVSVVAACGGGSEGDSQASGVQVLGTVVADAYLFDDDAIKRVNSRRGTNYSAENGEQGKSDLDTWHVCGA
AYNSLVNPSLYNQDLDKDGVADTNLTDDEGNLYYNIDLDGDKVAELNLLTDREGIYLNVDMNCDAKADTNLDNNLDGISD
LNIDVDGDMQADRLIDIDGDGKPDFSYTDSDGVSLAGVKVQLQGKYGEFETITDDNGQFSFERIPTGSYTLKADDVALDG
SNIWTRTLVEIEEFDDSIGAFRMHQDPIITLVNVNNESHKKGFWQDFSWYSSDIETEYAIGDTVWVEVTVEDPNQRPVTA
KFSADLETGTEEVVAGDGVFKYQHQISEKDAEEYMVSIMAELSNDDGFFGLNGMTDVMFGAQFMMADYIESEELEVETVT
VGDEVFDNPPDSTYMLVEVQQPIAIDGSVQIDVEVTGPDERIAEFYVVGIKDGFAKVPKGDSFLFEADTAYPQYIYEIQY
KTYSEAPFEHEEVVIKIPLDTDRKPAKVDGLMIDGIVATDVMARVGETYQLKALYTDPQDDVVQCRFEKAGNHSALDSVI
SDWGVCEVDYTFKAEDAVDQFNIRVLVRNSDGIITWDNYDDLKWYEVSVTK
>Mature_611_residues
MMKKAILFPLVVSVVAACGGGSEGDSQASGVQVLGTVVADAYLFDDDAIKRVNSRRGTNYSAENGEQGKSDLDTWHVCGA
AYNSLVNPSLYNQDLDKDGVADTNLTDDEGNLYYNIDLDGDKVAELNLLTDREGIYLNVDMNCDAKADTNLDNNLDGISD
LNIDVDGDMQADRLIDIDGDGKPDFSYTDSDGVSLAGVKVQLQGKYGEFETITDDNGQFSFERIPTGSYTLKADDVALDG
SNIWTRTLVEIEEFDDSIGAFRMHQDPIITLVNVNNESHKKGFWQDFSWYSSDIETEYAIGDTVWVEVTVEDPNQRPVTA
KFSADLETGTEEVVAGDGVFKYQHQISEKDAEEYMVSIMAELSNDDGFFGLNGMTDVMFGAQFMMADYIESEELEVETVT
VGDEVFDNPPDSTYMLVEVQQPIAIDGSVQIDVEVTGPDERIAEFYVVGIKDGFAKVPKGDSFLFEADTAYPQYIYEIQY
KTYSEAPFEHEEVVIKIPLDTDRKPAKVDGLMIDGIVATDVMARVGETYQLKALYTDPQDDVVQCRFEKAGNHSALDSVI
SDWGVCEVDYTFKAEDAVDQFNIRVLVRNSDGIITWDNYDDLKWYEVSVTK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67785; Mature: 67785

Theoretical pI: Translated: 3.80; Mature: 3.80

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKKAILFPLVVSVVAACGGGSEGDSQASGVQVLGTVVADAYLFDDDAIKRVNSRRGTNY
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHEEEECCHHHHHHHHCCCCCC
SAENGEQGKSDLDTWHVCGAAYNSLVNPSLYNQDLDKDGVADTNLTDDEGNLYYNIDLDG
CCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCC
DKVAELNLLTDREGIYLNVDMNCDAKADTNLDNNLDGISDLNIDVDGDMQADRLIDIDGD
CCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEECCC
GKPDFSYTDSDGVSLAGVKVQLQGKYGEFETITDDNGQFSFERIPTGSYTLKADDVALDG
CCCCCCCCCCCCEEEEEEEEEEECCCCCEEEEECCCCEEEEEECCCCCEEEEECCEEECC
SNIWTRTLVEIEEFDDSIGAFRMHQDPIITLVNVNNESHKKGFWQDFSWYSSDIETEYAI
CCCEEEEEEEHHHHCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCHHCCCCCEEEEE
GDTVWVEVTVEDPNQRPVTAKFSADLETGTEEVVAGDGVFKYQHQISEKDAEEYMVSIMA
CCEEEEEEEEECCCCCCEEEEEECCCCCCCCCEEECCCEEEHHHHHCCCHHHHHHHHHHH
ELSNDDGFFGLNGMTDVMFGAQFMMADYIESEELEVETVTVGDEVFDNPPDSTYMLVEVQ
HHCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECHHHHCCCCCCEEEEEEEC
QPIAIDGSVQIDVEVTGPDERIAEFYVVGIKDGFAKVPKGDSFLFEADTAYPQYIYEIQY
CCEEECCEEEEEEEECCCHHHEEEEEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEEEE
KTYSEAPFEHEEVVIKIPLDTDRKPAKVDGLMIDGIVATDVMARVGETYQLKALYTDPQD
EECCCCCCCCCEEEEEEECCCCCCCCEECCEEECCHHHHHHHHHCCCCEEEEEEECCCCC
DVVQCRFEKAGNHSALDSVISDWGVCEVDYTFKAEDAVDQFNIRVLVRNSDGIITWDNYD
CEEEEEECCCCCHHHHHHHHHCCCEEEEEEEECCCCCCCCEEEEEEEECCCCEEEECCCC
DLKWYEVSVTK
CCEEEEEEECC
>Mature Secondary Structure
MMKKAILFPLVVSVVAACGGGSEGDSQASGVQVLGTVVADAYLFDDDAIKRVNSRRGTNY
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHEEEECCHHHHHHHHCCCCCC
SAENGEQGKSDLDTWHVCGAAYNSLVNPSLYNQDLDKDGVADTNLTDDEGNLYYNIDLDG
CCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCC
DKVAELNLLTDREGIYLNVDMNCDAKADTNLDNNLDGISDLNIDVDGDMQADRLIDIDGD
CCEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEECCC
GKPDFSYTDSDGVSLAGVKVQLQGKYGEFETITDDNGQFSFERIPTGSYTLKADDVALDG
CCCCCCCCCCCCEEEEEEEEEEECCCCCEEEEECCCCEEEEEECCCCCEEEEECCEEECC
SNIWTRTLVEIEEFDDSIGAFRMHQDPIITLVNVNNESHKKGFWQDFSWYSSDIETEYAI
CCCEEEEEEEHHHHCCCCCEEEECCCCEEEEEECCCCCCCCCCCCCCCHHCCCCCEEEEE
GDTVWVEVTVEDPNQRPVTAKFSADLETGTEEVVAGDGVFKYQHQISEKDAEEYMVSIMA
CCEEEEEEEEECCCCCCEEEEEECCCCCCCCCEEECCCEEEHHHHHCCCHHHHHHHHHHH
ELSNDDGFFGLNGMTDVMFGAQFMMADYIESEELEVETVTVGDEVFDNPPDSTYMLVEVQ
HHCCCCCEEECCCHHHHHHHHHHHHHHHCCCCCEEEEEEEECHHHHCCCCCCEEEEEEEC
QPIAIDGSVQIDVEVTGPDERIAEFYVVGIKDGFAKVPKGDSFLFEADTAYPQYIYEIQY
CCEEECCEEEEEEEECCCHHHEEEEEEEEECCCCCCCCCCCCEEEEECCCCCEEEEEEEE
KTYSEAPFEHEEVVIKIPLDTDRKPAKVDGLMIDGIVATDVMARVGETYQLKALYTDPQD
EECCCCCCCCCEEEEEEECCCCCCCCEECCEEECCHHHHHHHHHCCCCEEEEEEECCCCC
DVVQCRFEKAGNHSALDSVISDWGVCEVDYTFKAEDAVDQFNIRVLVRNSDGIITWDNYD
CEEEEEECCCCCHHHHHHHHHCCCEEEEEEEECCCCCCCCEEEEEEEECCCCEEEECCCC
DLKWYEVSVTK
CCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA