Click here to switch to the map view.

The map label for this gene is 167625392

Identifier: 167625392

GI number: 167625392

Start: 4243341

End: 4244222

Strand: Reverse

Name: 167625392

Synonym: Shal_3482

Alternate gene names: NA

Gene position: 4244222-4243341 (Counterclockwise)

Preceding gene: 167625403

Following gene: 167625390

Centisome position: 81.2

GC content: 42.63

Gene sequence:

>882_bases
ATGAAAAAATTTTTACTCTCTACATTGTGCGTTATCTCACCTTTTGTCTATTCATCCACTGAAGCGGTTTACCTGCACTA
TGACGAGGTGTTGGATGGTGTAACCGATTTCCAAAAACAGCTTAAGCTGAATATCGACCTGTCTGGAAATACCGTCATCG
GAAAAACGGAGGCTGGAGCATTGATTTCTGGAAACGTTGAGAACACTAATAGCCAGTATATTGGCTCGGGTGAAAAACCA
AGATTCCAGTTTGAGATCCACAATGGTGAAACACGTAACTGGTATTTTGGTAACGTCAATGGCAAGTATTGGGAAGGTGT
GTGGTTTGGTGCAAATGGTGAGAAAGGTGATTTCTCCTTGTATACCGATTTGCTGACTAAAGAGGTGCCTCAGTTTGAAA
ATATCATTGCCTATTATGCCGATGAGGTGTTTCAACTGGGAGGCAACAACACTCATAACAGCCTGAATTCAAGCTTCTTG
ATTGACTCAGATAATCTTGAACCTCACTTTATCAATGACGAGTACTTCGATACCAGCAACGGCTTGTTTTTGCAGGCTGA
TGTGCGTGATGGCAACTTGCCTCTCTCTTTTTATATCGATTATAAAAAGCCTATGCCGATGAAAACTTTCCGTTTAGGTT
CGTTTAACAATGGTGAAGGTACAAGGCTGCGCACATTTAGCTTCGATATATGGAAAGATGGTGATTGGCAAACTGTAGAG
AACTTCGAGTTTGCGCCGATTTATGCGCCAACTTATCAAAGGCAGGAGTTTAGTTTACCGCGTACGGTTTATGCGGAGCG
CATTCGTATTTCAGCGACGGCAACCGATGATTATACCGATGGCAGCAAACTGTTGATGTGGGGGCTTTCTTTTAAGCGTT
AG

Upstream 100 bases:

>100_bases
TCTGTTTACTGCAGAGACATGAGTTGTACAAAAAAACAATTAAACCAATAACTAAAGTAATAGTTAGCACATATACTGCT
ATCAGCTAAGGCCATATATT

Downstream 100 bases:

>100_bases
TCTTTTCTGTATCAGGTGCTTATGAGGTTGTAAGAAAAAGTTCGACACTTGGTGCAAGTGCCGGACTTTTTATATCAATC
TCTATATATCAATGTCCATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MKKFLLSTLCVISPFVYSSTEAVYLHYDEVLDGVTDFQKQLKLNIDLSGNTVIGKTEAGALISGNVENTNSQYIGSGEKP
RFQFEIHNGETRNWYFGNVNGKYWEGVWFGANGEKGDFSLYTDLLTKEVPQFENIIAYYADEVFQLGGNNTHNSLNSSFL
IDSDNLEPHFINDEYFDTSNGLFLQADVRDGNLPLSFYIDYKKPMPMKTFRLGSFNNGEGTRLRTFSFDIWKDGDWQTVE
NFEFAPIYAPTYQRQEFSLPRTVYAERIRISATATDDYTDGSKLLMWGLSFKR

Sequences:

>Translated_293_residues
MKKFLLSTLCVISPFVYSSTEAVYLHYDEVLDGVTDFQKQLKLNIDLSGNTVIGKTEAGALISGNVENTNSQYIGSGEKP
RFQFEIHNGETRNWYFGNVNGKYWEGVWFGANGEKGDFSLYTDLLTKEVPQFENIIAYYADEVFQLGGNNTHNSLNSSFL
IDSDNLEPHFINDEYFDTSNGLFLQADVRDGNLPLSFYIDYKKPMPMKTFRLGSFNNGEGTRLRTFSFDIWKDGDWQTVE
NFEFAPIYAPTYQRQEFSLPRTVYAERIRISATATDDYTDGSKLLMWGLSFKR
>Mature_293_residues
MKKFLLSTLCVISPFVYSSTEAVYLHYDEVLDGVTDFQKQLKLNIDLSGNTVIGKTEAGALISGNVENTNSQYIGSGEKP
RFQFEIHNGETRNWYFGNVNGKYWEGVWFGANGEKGDFSLYTDLLTKEVPQFENIIAYYADEVFQLGGNNTHNSLNSSFL
IDSDNLEPHFINDEYFDTSNGLFLQADVRDGNLPLSFYIDYKKPMPMKTFRLGSFNNGEGTRLRTFSFDIWKDGDWQTVE
NFEFAPIYAPTYQRQEFSLPRTVYAERIRISATATDDYTDGSKLLMWGLSFKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33567; Mature: 33567

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFLLSTLCVISPFVYSSTEAVYLHYDEVLDGVTDFQKQLKLNIDLSGNTVIGKTEAGA
CHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHEEEEEEEECCCEEEECCCCCE
LISGNVENTNSQYIGSGEKPRFQFEIHNGETRNWYFGNVNGKYWEGVWFGANGEKGDFSL
EEECCCCCCCCEEECCCCCCEEEEEEECCCCCCEEEECCCCEEEEEEEECCCCCCCCHHH
YTDLLTKEVPQFENIIAYYADEVFQLGGNNTHNSLNSSFLIDSDNLEPHFINDEYFDTSN
HHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCEECCCCEEECCC
GLFLQADVRDGNLPLSFYIDYKKPMPMKTFRLGSFNNGEGTRLRTFSFDIWKDGDWQTVE
CEEEEEECCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCEEEEEEEEEEECCCCCEEC
NFEFAPIYAPTYQRQEFSLPRTVYAERIRISATATDDYTDGSKLLMWGLSFKR
CEEEEEEECCCCCCHHCCCCHHHEEEEEEEEEEECCCCCCCCEEEEEEEECCC
>Mature Secondary Structure
MKKFLLSTLCVISPFVYSSTEAVYLHYDEVLDGVTDFQKQLKLNIDLSGNTVIGKTEAGA
CHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHEEEEEEEECCCEEEECCCCCE
LISGNVENTNSQYIGSGEKPRFQFEIHNGETRNWYFGNVNGKYWEGVWFGANGEKGDFSL
EEECCCCCCCCEEECCCCCCEEEEEEECCCCCCEEEECCCCEEEEEEEECCCCCCCCHHH
YTDLLTKEVPQFENIIAYYADEVFQLGGNNTHNSLNSSFLIDSDNLEPHFINDEYFDTSN
HHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCEECCCCEEECCC
GLFLQADVRDGNLPLSFYIDYKKPMPMKTFRLGSFNNGEGTRLRTFSFDIWKDGDWQTVE
CEEEEEECCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCEEEEEEEEEEECCCCCEEC
NFEFAPIYAPTYQRQEFSLPRTVYAERIRISATATDDYTDGSKLLMWGLSFKR
CEEEEEEECCCCCCHHCCCCHHHEEEEEEEEEEECCCCCCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA