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The map label for this gene is ybjZ [C]

Identifier: 167625345

GI number: 167625345

Start: 4182424

End: 4183725

Strand: Reverse

Name: ybjZ [C]

Synonym: Shal_3434

Alternate gene names: 167625345

Gene position: 4183725-4182424 (Counterclockwise)

Preceding gene: 167625346

Following gene: 167625344

Centisome position: 80.04

GC content: 45.01

Gene sequence:

>1302_bases
ATGTTTTTTTATTATCTGGATCTAGCTTGGCGTAGCATTAAGAAGACGCCATTTTTATCGCTACTAATGGTACTGGCTAT
CTCAATCGGCATCGGTATTACCATCACCAGCTTAAATATCTACAAGATGGCCTCGGTTAACCCTGCAGGAGAGCGTTCAT
CTCAGTTATTTGCTGTGCAGTTAATGAGTCAAGATGTGGATACTTGGGAGAAGATTAATCAGCAGATCACTTATCAGGAT
GGATATAACCTGAGAAAAAGTGACCTGCCTGTTCGCCAAACCGCCATGTATCTAACTGGGATGGCGGTACAAACAGAAGA
TGTGAACTTTTCGCCTATTTTGGAAGGGGTTCGTGTAGCCGATGCTGATTTCTTTGCATTGTTTAATGTGCCTTTTTTGT
ATGGTGGACCATGGGATAAGCAGGTTGATGAAGAAGGAGGCTACAAAGTTGTTATTAATGAAAGTATCAACCAAAAAGCT
TTTGGTGGCGGCAATAGTGTGGGTAAAACATTGTTGTTAGACCGTAAGCCCTATCAAGTTGTGGGCGTGACGAAAAACTG
GAATCCAAGTCCTAAGTATTACGATGTCAATAATGGCGCCTTTGATGACGCTGAGCAAATCTATGTGCCTTTTTCTCTAG
CGCCTATCGAGGAGTTTGAAAGCCGGGGAAATAACAACTCTTGGCGCCACGAAAAGATACGCAACTACAGCGACAGAATT
GCATCTGAGATGCATTGGGTTCAGTACTGGGTTGAGCTTGATACGCCAGACAAACAGCAGCAATATCAAGAGTGGTTAGC
ACGTTATGTTGAGCAGCAAAAGCAGCTCGGCCGTTTTAAGCGCCCCGATGCCCGCGGTGAAATAAAGGATGTGGCGCAGT
GGTTGAGCTTTAATAATGTTGTACCAGAAGACAACAAGGTGCTTGTGGGGCTGAGTGTGCTTTTTTTGATTGTGTGTTTA
ATCAATATGCTGGGCTTACTATTGGCGAAGTTCTTAAAGCGTGCACCTGAGGTGGGAGTCAGGCGTGCGATTGGTGCAAG
TAGGATACAGATTTTTTCACAGCACCTTGTTGAAGTGGGTTTGATTGGATTGTGTGGCGGAGCGCTTGGATTACTCTGGG
CTTGGGTAGCACTGTATTTCTTATCTTCTAAGTTTGAGCTTGAAGACTCGCTTGCCCAGCTTGACCAAAGCATGTGGGTT
ATAGCCCCACTGATCGCGGTATCGGCAGCCATTATTGCCGGAATTTATCCTGCATGGCGAATATGTAGCACCAATCCCAG
TGTCTATCTCAAGAGCCAATGA

Upstream 100 bases:

>100_bases
TCAAGCAGGGATGGAGCCACAAGGCCGATCGGCACAAGCTAGAGTTCAGTCAGTATCTGATGCGGCTTCGGTTGCTTAAG
CTACTACTAAGGAGAGTACG

Downstream 100 bases:

>100_bases
TTTACAGAGTGAGAAAGGAACTTACTATGTTGCAAGTTAAACCCATTATGAGCATGTTGATGCGTAATAAAAGTGGCCCT
CTATTGCTGCTTATTCAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: ABC Transporter Permease ABC Transporter Permease Protein; ABC Transporter Permease Protein; ABC Efflux Pump Inner Membrane Subunit; ABC-Type Transport System ATPase And Permease

Number of amino acids: Translated: 433; Mature: 433

Protein sequence:

>433_residues
MFFYYLDLAWRSIKKTPFLSLLMVLAISIGIGITITSLNIYKMASVNPAGERSSQLFAVQLMSQDVDTWEKINQQITYQD
GYNLRKSDLPVRQTAMYLTGMAVQTEDVNFSPILEGVRVADADFFALFNVPFLYGGPWDKQVDEEGGYKVVINESINQKA
FGGGNSVGKTLLLDRKPYQVVGVTKNWNPSPKYYDVNNGAFDDAEQIYVPFSLAPIEEFESRGNNNSWRHEKIRNYSDRI
ASEMHWVQYWVELDTPDKQQQYQEWLARYVEQQKQLGRFKRPDARGEIKDVAQWLSFNNVVPEDNKVLVGLSVLFLIVCL
INMLGLLLAKFLKRAPEVGVRRAIGASRIQIFSQHLVEVGLIGLCGGALGLLWAWVALYFLSSKFELEDSLAQLDQSMWV
IAPLIAVSAAIIAGIYPAWRICSTNPSVYLKSQ

Sequences:

>Translated_433_residues
MFFYYLDLAWRSIKKTPFLSLLMVLAISIGIGITITSLNIYKMASVNPAGERSSQLFAVQLMSQDVDTWEKINQQITYQD
GYNLRKSDLPVRQTAMYLTGMAVQTEDVNFSPILEGVRVADADFFALFNVPFLYGGPWDKQVDEEGGYKVVINESINQKA
FGGGNSVGKTLLLDRKPYQVVGVTKNWNPSPKYYDVNNGAFDDAEQIYVPFSLAPIEEFESRGNNNSWRHEKIRNYSDRI
ASEMHWVQYWVELDTPDKQQQYQEWLARYVEQQKQLGRFKRPDARGEIKDVAQWLSFNNVVPEDNKVLVGLSVLFLIVCL
INMLGLLLAKFLKRAPEVGVRRAIGASRIQIFSQHLVEVGLIGLCGGALGLLWAWVALYFLSSKFELEDSLAQLDQSMWV
IAPLIAVSAAIIAGIYPAWRICSTNPSVYLKSQ
>Mature_433_residues
MFFYYLDLAWRSIKKTPFLSLLMVLAISIGIGITITSLNIYKMASVNPAGERSSQLFAVQLMSQDVDTWEKINQQITYQD
GYNLRKSDLPVRQTAMYLTGMAVQTEDVNFSPILEGVRVADADFFALFNVPFLYGGPWDKQVDEEGGYKVVINESINQKA
FGGGNSVGKTLLLDRKPYQVVGVTKNWNPSPKYYDVNNGAFDDAEQIYVPFSLAPIEEFESRGNNNSWRHEKIRNYSDRI
ASEMHWVQYWVELDTPDKQQQYQEWLARYVEQQKQLGRFKRPDARGEIKDVAQWLSFNNVVPEDNKVLVGLSVLFLIVCL
INMLGLLLAKFLKRAPEVGVRRAIGASRIQIFSQHLVEVGLIGLCGGALGLLWAWVALYFLSSKFELEDSLAQLDQSMWV
IAPLIAVSAAIIAGIYPAWRICSTNPSVYLKSQ

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49044; Mature: 49044

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFYYLDLAWRSIKKTPFLSLLMVLAISIGIGITITSLNIYKMASVNPAGERSSQLFAVQ
CEEEEEEHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCCCCCCCHHHHHH
LMSQDVDTWEKINQQITYQDGYNLRKSDLPVRQTAMYLTGMAVQTEDVNFSPILEGVRVA
HHHCCHHHHHHHCCEEEECCCCCCCCCCCCHHHHHHHHHCCEEEECCCCHHHHHCCCEEC
DADFFALFNVPFLYGGPWDKQVDEEGGYKVVINESINQKAFGGGNSVGKTLLLDRKPYQV
CCHHHHHHCCCEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCCEE
VGVTKNWNPSPKYYDVNNGAFDDAEQIYVPFSLAPIEEFESRGNNNSWRHEKIRNYSDRI
EEEECCCCCCCCEEECCCCCCCCCCEEEEEEECCCHHHHHHCCCCCCHHHHHHHHHHHHH
ASEMHWVQYWVELDTPDKQQQYQEWLARYVEQQKQLGRFKRPDARGEIKDVAQWLSFNNV
HHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCC
VPEDNKVLVGLSVLFLIVCLINMLGLLLAKFLKRAPEVGVRRAIGASRIQIFSQHLVEVG
CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
LIGLCGGALGLLWAWVALYFLSSKFELEDSLAQLDQSMWVIAPLIAVSAAIIAGIYPAWR
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHE
ICSTNPSVYLKSQ
EECCCCCEEEECC
>Mature Secondary Structure
MFFYYLDLAWRSIKKTPFLSLLMVLAISIGIGITITSLNIYKMASVNPAGERSSQLFAVQ
CEEEEEEHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCCCCCCCHHHHHH
LMSQDVDTWEKINQQITYQDGYNLRKSDLPVRQTAMYLTGMAVQTEDVNFSPILEGVRVA
HHHCCHHHHHHHCCEEEECCCCCCCCCCCCHHHHHHHHHCCEEEECCCCHHHHHCCCEEC
DADFFALFNVPFLYGGPWDKQVDEEGGYKVVINESINQKAFGGGNSVGKTLLLDRKPYQV
CCHHHHHHCCCEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCCCEE
VGVTKNWNPSPKYYDVNNGAFDDAEQIYVPFSLAPIEEFESRGNNNSWRHEKIRNYSDRI
EEEECCCCCCCCEEECCCCCCCCCCEEEEEEECCCHHHHHHCCCCCCHHHHHHHHHHHHH
ASEMHWVQYWVELDTPDKQQQYQEWLARYVEQQKQLGRFKRPDARGEIKDVAQWLSFNNV
HHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCC
VPEDNKVLVGLSVLFLIVCLINMLGLLLAKFLKRAPEVGVRRAIGASRIQIFSQHLVEVG
CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
LIGLCGGALGLLWAWVALYFLSSKFELEDSLAQLDQSMWVIAPLIAVSAAIIAGIYPAWR
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHE
ICSTNPSVYLKSQ
EECCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA