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The map label for this gene is ygfB [C]

Identifier: 167625289

GI number: 167625289

Start: 4122445

End: 4123020

Strand: Reverse

Name: ygfB [C]

Synonym: Shal_3378

Alternate gene names: 167625289

Gene position: 4123020-4122445 (Counterclockwise)

Preceding gene: 167625294

Following gene: 167625288

Centisome position: 78.88

GC content: 48.78

Gene sequence:

>576_bases
ATGGCGAGCCTCCCTACATTGCGCATGGATAAATTACTTGCAGCACTTAATGCTGCTGAAATTGGTCAGCACCCTGTCGA
AGTTCATGGTGCTCTTGTCGGGCTAATTTGTGGAGGGGTAGAGCAAAACGCCTCGGGTTGGACCCAACCTTTGCTTGAGT
TAATGAACGACGGTCAAGCACTACCTAGTGAGCTACAAGCACTGATTGAAGAGCTATACCAAGATGCGGTCACCCGTCTG
TCGGATACTGACTTTGGCTTTAGCCCAATGCTACCCGAAGAGGAAGAGACGCTTTCAAAGCGTGTCGAAGCATTATCACT
TTGGGTGCAAAGCTTTCTAACGGGTATTGCGATTATCCAACCTAAACTTAATCAAGCACCACTAGATGTACGTGAAGTCA
TTCAAGACTTGTCTGAAATCGCCCAAGTCGAGTTTGATGTTGGTGAAGACGAAGAGTCAGAAGCGGCACTCATCGAGTTG
ATGGAGTTCACTCGTATGGCCGCCTTAATGTGCTACGCCGAGTTTGGTCCCGCGGTTGATGATGACGAGCCCATCGATGT
GGGCGTACTTCACTAA

Upstream 100 bases:

>100_bases
TTCCACATAGTTTTACAGACTTTATTATCACGACTCTTGGTCGAGCTCACCACTTCTGCTAGCATGAACAACAGTAAATT
TTGTGATTGGATAACACTTT

Downstream 100 bases:

>100_bases
AACTCGTACCCAATACCGTCATCGCAGTTATTTGCCATGGCGGTTTTTGTATCAGCAACACTACCAACTAAATTTGTTAT
TGGGTCAATAAACTCATGGC

Product: yecA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 191; Mature: 190

Protein sequence:

>191_residues
MASLPTLRMDKLLAALNAAEIGQHPVEVHGALVGLICGGVEQNASGWTQPLLELMNDGQALPSELQALIEELYQDAVTRL
SDTDFGFSPMLPEEEETLSKRVEALSLWVQSFLTGIAIIQPKLNQAPLDVREVIQDLSEIAQVEFDVGEDEESEAALIEL
MEFTRMAALMCYAEFGPAVDDDEPIDVGVLH

Sequences:

>Translated_191_residues
MASLPTLRMDKLLAALNAAEIGQHPVEVHGALVGLICGGVEQNASGWTQPLLELMNDGQALPSELQALIEELYQDAVTRL
SDTDFGFSPMLPEEEETLSKRVEALSLWVQSFLTGIAIIQPKLNQAPLDVREVIQDLSEIAQVEFDVGEDEESEAALIEL
MEFTRMAALMCYAEFGPAVDDDEPIDVGVLH
>Mature_190_residues
ASLPTLRMDKLLAALNAAEIGQHPVEVHGALVGLICGGVEQNASGWTQPLLELMNDGQALPSELQALIEELYQDAVTRLS
DTDFGFSPMLPEEEETLSKRVEALSLWVQSFLTGIAIIQPKLNQAPLDVREVIQDLSEIAQVEFDVGEDEESEAALIELM
EFTRMAALMCYAEFGPAVDDDEPIDVGVLH

Specific function: Unknown

COG id: COG3079

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0149 family [H]

Homologues:

Organism=Escherichia coli, GI87082182, Length=162, Percent_Identity=36.4197530864198, Blast_Score=95, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011978 [H]

Pfam domain/function: PF03695 UPF0149 [H]

EC number: NA

Molecular weight: Translated: 20864; Mature: 20733

Theoretical pI: Translated: 3.69; Mature: 3.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASLPTLRMDKLLAALNAAEIGQHPVEVHGALVGLICGGVEQNASGWTQPLLELMNDGQA
CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCC
LPSELQALIEELYQDAVTRLSDTDFGFSPMLPEEEETLSKRVEALSLWVQSFLTGIAIIQ
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
PKLNQAPLDVREVIQDLSEIAQVEFDVGEDEESEAALIELMEFTRMAALMCYAEFGPAVD
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DDEPIDVGVLH
CCCCCCCCCCC
>Mature Secondary Structure 
ASLPTLRMDKLLAALNAAEIGQHPVEVHGALVGLICGGVEQNASGWTQPLLELMNDGQA
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCC
LPSELQALIEELYQDAVTRLSDTDFGFSPMLPEEEETLSKRVEALSLWVQSFLTGIAIIQ
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
PKLNQAPLDVREVIQDLSEIAQVEFDVGEDEESEAALIELMEFTRMAALMCYAEFGPAVD
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DDEPIDVGVLH
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA