| Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
|---|---|
| Accession | NC_010334 |
| Length | 5,226,917 |
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The map label for this gene is yieF [C]
Identifier: 167625199
GI number: 167625199
Start: 4008084
End: 4008605
Strand: Reverse
Name: yieF [C]
Synonym: Shal_3287
Alternate gene names: 167625199
Gene position: 4008605-4008084 (Counterclockwise)
Preceding gene: 167625202
Following gene: 167625198
Centisome position: 76.69
GC content: 46.17
Gene sequence:
>522_bases ATGAAACTATTAGCCTTTGCAGCCAGCAGCAGCACTAAGTCAATCAACAAGCAACTTGCAACATATGCAGCATCATTAGT GCAAGGTGCCGAGGTTGAAATCCTCGATATTAATGATTATGAAATGCCAATCTTTAGCCAAGATAGAGAAGAGCAGTTGG GCCACCCTGAGTTGGCTCAACAGTTCTTTGCCAAAATTGGTGCAGCCGATGCGATTATTATCTCTTTTGCCGAGCACAAT GGCTCATACACAGCAGCTTATAAAAACTTGTTTGACTGGACGTCACGTATCGATATGAAGGTATTTCAGAATAAACCAAT GGTACTGCTCGCGACTTCGCCAGGACCTGGCGGCGCATCGAGCGTATTAGCCGCAGCAGCGGGCTCAGCGCCTTATTTCG CTGCAGACGTGAAAGCGACACTTTCAGTACCAAGCTTTTTCGATAATTTCGATATGGAAAAGCAGCAGCTGCGTAATTCA GAGCTGGAAGAACAGCTAAAGACGGCGCTAGCGTTACTGTAA
Upstream 100 bases:
>100_bases GTTGAGTGGATGGCAATTGAATCAAATACACTTTGCAGCTGTGACTGCAGCGTCAATGAATAATCACTGAATAGAGAATT ACTGAATAGAGAGTCCTATT
Downstream 100 bases:
>100_bases ATCGAGAGTTGAAGATTTAAACTTGAAAAGCGAATGCCGAGCATTCGCTTTTTTGTTTGTGCTGCATCGCCCAATATCCC ATTGGTTTTGCCAATCCTTG
Product: NADPH-dependent FMN reductase
Products: NA
Alternate protein names: Oxidoreductase; FMN Reductase NADPH-Dependent; Redicted Flavoprotein; Flavoprotein; Fmn Reductase NADPH-Dependent; NADPH-Dependent Fmn Reductase; NADPH-Dependent Fmn Reductase Domain Protein
Number of amino acids: Translated: 173; Mature: 173
Protein sequence:
>173_residues MKLLAFAASSSTKSINKQLATYAASLVQGAEVEILDINDYEMPIFSQDREEQLGHPELAQQFFAKIGAADAIIISFAEHN GSYTAAYKNLFDWTSRIDMKVFQNKPMVLLATSPGPGGASSVLAAAAGSAPYFAADVKATLSVPSFFDNFDMEKQQLRNS ELEEQLKTALALL
Sequences:
>Translated_173_residues MKLLAFAASSSTKSINKQLATYAASLVQGAEVEILDINDYEMPIFSQDREEQLGHPELAQQFFAKIGAADAIIISFAEHN GSYTAAYKNLFDWTSRIDMKVFQNKPMVLLATSPGPGGASSVLAAAAGSAPYFAADVKATLSVPSFFDNFDMEKQQLRNS ELEEQLKTALALL >Mature_173_residues MKLLAFAASSSTKSINKQLATYAASLVQGAEVEILDINDYEMPIFSQDREEQLGHPELAQQFFAKIGAADAIIISFAEHN GSYTAAYKNLFDWTSRIDMKVFQNKPMVLLATSPGPGGASSVLAAAAGSAPYFAADVKATLSVPSFFDNFDMEKQQLRNS ELEEQLKTALALL
Specific function: Unknown
COG id: COG0431
COG function: function code R; Predicted flavoprotein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18761; Mature: 18761
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLAFAASSSTKSINKQLATYAASLVQGAEVEILDINDYEMPIFSQDREEQLGHPELAQ CCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHCCCHHHHH QFFAKIGAADAIIISFAEHNGSYTAAYKNLFDWTSRIDMKVFQNKPMVLLATSPGPGGAS HHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHEECCCCEEEEEECCCCCCHH SVLAAAAGSAPYFAADVKATLSVPSFFDNFDMEKQQLRNSELEEQLKTALALL HHHHHHCCCCCEEEECCHHEECCCHHHCCCCHHHHHHCCHHHHHHHHHHHHCC >Mature Secondary Structure MKLLAFAASSSTKSINKQLATYAASLVQGAEVEILDINDYEMPIFSQDREEQLGHPELAQ CCEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHCCCHHHHH QFFAKIGAADAIIISFAEHNGSYTAAYKNLFDWTSRIDMKVFQNKPMVLLATSPGPGGAS HHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHEECCCCEEEEEECCCCCCHH SVLAAAAGSAPYFAADVKATLSVPSFFDNFDMEKQQLRNSELEEQLKTALALL HHHHHHCCCCCEEEECCHHEECCCHHHCCCCHHHHHHCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA